Oryctolagus cuniculus (rabbit): 100339101
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Entry
100339101 CDS
T03373
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100339101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100339101
03036 Chromosome and associated proteins [BR:
ocu03036
]
100339101
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100339101
Coactivators
SAGA/TFTC/STAGA complex
100339101
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100339101
STAGA complex
100339101
TFTC complex
100339101
SAGA complex
100339101
SLIK complex
100339101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
100339101
NCBI-ProteinID:
XP_008272582
Ensembl:
ENSOCUG00000009491
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MQSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPSRGGSGGRGGPGGRGGPGGRGGRRPDDLPWDSLL
LQGSPSGAGAEPGFGSGLSLPPGGAGPDDPSPSVTLADIYRELYAFFGDSLATRFGTGQP
APTAPRPPGDKKEPAAAPDSVRKMPQLTASAVVSPQGDESPRGGGGGAPSAPAPAASENR
PLPRVHRARGAPRQQGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAF
PAPYGPSPASRYVQKLPMIGRTGRPARRWALSDYSLYLPL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctccactggggccatgtcggagcgagaagagcggcggtttgtggagatccct
cgggagtcggtccggctcatggcagagagcaccggcctggagctgagcgacgaggtggcg
gccctgcttgcagaggatgtgtgctaccggctccgggaagcaacacagaacagctctcag
ttcatgaagcacaccaagcggcggaagctgacggttgaggacttcaacagggccctcagg
tggagcagcgtggaggctgtctgtggttatggctcccaggaggccttgcctctgcgccca
gccagggagggtgagctctactttcctgaggatcgagaggtgaacctggtggagctggct
ttggccaccaacatccccaaaggctgtgctgagacagctgtcagagttcatgtctcctac
ctggatggcaaagggaacctggccccccagggatcagtgcctagcgccgtgtcatcgctg
actgatgacctgctcaagtactatcagcaggtgactcgggctgtgctaggggatgatccc
cagctgatgaaggtggctctccaggacttgcagacgaactccaagattgcagcgctcctg
ccttactttgtttatgtggtcagtggggtgaaatctgtcagccatgacctggagcagctg
caccggctgctgcaggtggcacggagcctggtccggaacccacacctctgcctggggccc
tatgtccgctccctggtgggcagcgtcctctactgcgtcctggagcctctggctgcctcc
atcaaccccctgaatgaccactggactctgcgggacggggctgctctcctgctcagccac
atcttctggactcatggggaccttgtaagtggcctctatcagcagatcctgctctccctg
cagaaggttctggcagaccccgtgcggcctttgtgttctcactatggggccgtggtgggg
ctgcatgctcttggctggaaggcagtggagcgagtgctgtacccacacctgtccacttat
tggacaaacctgcaggctgtgctggacgattattcggtgtccaacgctcaggtcaaagca
gatgggcacaaagtctacggagccattctggtggctgtagagcggctgctgaagatgaag
gcccaggcggcggagcccagcaggggcggctccggcggcaggggcggccccggcggcagg
ggcggccccggcggcaggggcggccggcgcccggacgacctgccctgggacagcctgctc
ctgcagggctctccctccggcgctggtgcggagccaggcttcgggtctggcctctcgctg
ccgccagggggcgcggggccggacgacccttctccttccgtgaccctggccgacatctac
cgggagctctacgccttcttcggtgacagcttggccactcgcttcggcaccggccagccc
gcgcccacggccccgcggccgcccggggacaagaaggagccagcggccgccccggactct
gtgcggaagatgccgcagctgaccgccagcgcggtggttagcccccagggcgacgagagc
ccccggggcggcggaggcggcgctccgtcggccccggcgcccgccgcctccgagaacagg
ccgctgccgcgcgtgcaccgggcgcgaggggcgccccggcagcagggccccggcgcgggc
acccgcgacgtcttccagaagagccgtttcgccccgcgcggcgccccgcactttcggttc
atcatcgccgggcggcaggccgggaggcgctgccgggggcgcctcttccagactgccttc
cccgcgccgtacgggcccagcccggcctctcgctacgtgcagaagctgcccatgatcggc
cgcaccggccggccggcccgccgctgggcgctgtcggactactcgctgtacctgcccctc
tga
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