KEGG   Oryctolagus cuniculus (rabbit): 100339101
Entry
100339101         CDS       T03373                                 
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100339101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100339101
   03036 Chromosome and associated proteins [BR:ocu03036]
    100339101
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100339101
   Coactivators
    SAGA/TFTC/STAGA complex
     100339101
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100339101
    STAGA complex
     100339101
    TFTC complex
     100339101
    SAGA complex
     100339101
    SLIK complex
     100339101
SSDB
Motif
Pfam: TAF6_C TAF
Other DBs
NCBI-GeneID: 100339101
NCBI-ProteinID: XP_008272582
Ensembl: ENSOCUG00000009491
LinkDB
Position
Unknown
AA seq 640 aa
MQSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPSRGGSGGRGGPGGRGGPGGRGGRRPDDLPWDSLL
LQGSPSGAGAEPGFGSGLSLPPGGAGPDDPSPSVTLADIYRELYAFFGDSLATRFGTGQP
APTAPRPPGDKKEPAAAPDSVRKMPQLTASAVVSPQGDESPRGGGGGAPSAPAPAASENR
PLPRVHRARGAPRQQGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAF
PAPYGPSPASRYVQKLPMIGRTGRPARRWALSDYSLYLPL
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgcaaagctccactggggccatgtcggagcgagaagagcggcggtttgtggagatccct
cgggagtcggtccggctcatggcagagagcaccggcctggagctgagcgacgaggtggcg
gccctgcttgcagaggatgtgtgctaccggctccgggaagcaacacagaacagctctcag
ttcatgaagcacaccaagcggcggaagctgacggttgaggacttcaacagggccctcagg
tggagcagcgtggaggctgtctgtggttatggctcccaggaggccttgcctctgcgccca
gccagggagggtgagctctactttcctgaggatcgagaggtgaacctggtggagctggct
ttggccaccaacatccccaaaggctgtgctgagacagctgtcagagttcatgtctcctac
ctggatggcaaagggaacctggccccccagggatcagtgcctagcgccgtgtcatcgctg
actgatgacctgctcaagtactatcagcaggtgactcgggctgtgctaggggatgatccc
cagctgatgaaggtggctctccaggacttgcagacgaactccaagattgcagcgctcctg
ccttactttgtttatgtggtcagtggggtgaaatctgtcagccatgacctggagcagctg
caccggctgctgcaggtggcacggagcctggtccggaacccacacctctgcctggggccc
tatgtccgctccctggtgggcagcgtcctctactgcgtcctggagcctctggctgcctcc
atcaaccccctgaatgaccactggactctgcgggacggggctgctctcctgctcagccac
atcttctggactcatggggaccttgtaagtggcctctatcagcagatcctgctctccctg
cagaaggttctggcagaccccgtgcggcctttgtgttctcactatggggccgtggtgggg
ctgcatgctcttggctggaaggcagtggagcgagtgctgtacccacacctgtccacttat
tggacaaacctgcaggctgtgctggacgattattcggtgtccaacgctcaggtcaaagca
gatgggcacaaagtctacggagccattctggtggctgtagagcggctgctgaagatgaag
gcccaggcggcggagcccagcaggggcggctccggcggcaggggcggccccggcggcagg
ggcggccccggcggcaggggcggccggcgcccggacgacctgccctgggacagcctgctc
ctgcagggctctccctccggcgctggtgcggagccaggcttcgggtctggcctctcgctg
ccgccagggggcgcggggccggacgacccttctccttccgtgaccctggccgacatctac
cgggagctctacgccttcttcggtgacagcttggccactcgcttcggcaccggccagccc
gcgcccacggccccgcggccgcccggggacaagaaggagccagcggccgccccggactct
gtgcggaagatgccgcagctgaccgccagcgcggtggttagcccccagggcgacgagagc
ccccggggcggcggaggcggcgctccgtcggccccggcgcccgccgcctccgagaacagg
ccgctgccgcgcgtgcaccgggcgcgaggggcgccccggcagcagggccccggcgcgggc
acccgcgacgtcttccagaagagccgtttcgccccgcgcggcgccccgcactttcggttc
atcatcgccgggcggcaggccgggaggcgctgccgggggcgcctcttccagactgccttc
cccgcgccgtacgggcccagcccggcctctcgctacgtgcagaagctgcccatgatcggc
cgcaccggccggccggcccgccgctgggcgctgtcggactactcgctgtacctgcccctc
tga

KEGG   Oryctolagus cuniculus (rabbit): 100343174
Entry
100343174         CDS       T03373                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100343174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100343174
   03036 Chromosome and associated proteins [BR:ocu03036]
    100343174
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100343174
   Coactivators
    SAGA/TFTC/STAGA complex
     100343174
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100343174
    STAGA complex
     100343174
    TFTC complex
     100343174
    SAGA complex
     100343174
    SLIK complex
     100343174
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Bromo_TP TFIID-18kDa Histone
Other DBs
NCBI-GeneID: 100343174
NCBI-ProteinID: XP_051703714
Ensembl: ENSOCUG00000023479
LinkDB
Position
6:27603254..27609994
AA seq 716 aa
MVRETGNSVLVGTLGCFPLCLLPVSPLQHPPSGRRSSRMAEEKKLKLSNTVLPSESMKVV
AESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEP
LYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQ
PAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGKGKEKKAPPLLE
GTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTF
ISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPD
VDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAE
LGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPP
DNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPGPR
TPGLLKVPGSITLPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASSTQQVLSLSTSAPG
SGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPA
SHPSPVPPPSSSPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPSGSGSPQPAP
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggtaagggagactgggaattcggttttggtggggactttgggttgttttcctctttgc
ctcctccctgtctctcccctacagcatcctccttcagggaggaggagttccagaatggct
gaggagaagaagctgaaacttagcaacaccgtgctgccctcggaatccatgaaggtggtg
gccgagtccatgggcatcgcccagatccaggaggagacctgccagctgctgaccgatgag
gtcagctaccgcatcaaggagatcgcccaggacgctttgaagttcatgcacatgggtaag
cggcagaagctcaccaccagcgacattgactacgccctgaagctgaagaacgtcgagccc
ctctatggcttccacgctcaggagttcatccctttccgtttcgcctctggcgggggacgg
gagctgtacttctacgaggagaaggaggttgatctgagcgacatcatcaacaccccgctg
ccccgggtgcccctggacgtctgcctcaaagctcactggctgagcattgaaggctgccag
ccagctataccagagaacccacccccagctcccaaagagcagcagaaggctgaggccaca
gaacccctcaagtccacaaagccgggccaggaggaagatgggcccctgaaaagcaaaggt
caaggggccgcgccagccgacggcaaagggaaagagaagaaggcaccgcccctgctggag
gggacccctttgcgcctgaagccccggagcatccacgagttgtccgtggagcagcagctg
tactacaaggagatcacagaagcctgcgtggggtcctgcgaggccaagagagcggaggct
ctgcagagcattgctacggacccgggcctctaccagatgctgccgcgattcagcaccttc
atctcagagggggtccgtgtgaacgtagttcagaacaacctggccctgctcatctacctg
atgcgcatggtaaaggcgctgatggacaaccctacgctgtatctagaaaaatacgtgcat
gagctgattccagctgtgatgacctgcattgtgagcaggcagctgtgcctgcgacccgat
gtggacaatcactgggcactccgggattttgccgcccgcctggtggctcagatctgcaag
catttcagcacaaccactaacaacatccagtcccggatcaccaagaccttcaccaagagc
tgggtggacgagaagactccgtggacaactcgttacggctccatcgcaggcttggcggag
ctgggacacgatgtgatcaagactctgattctgccacggctgcagcaggagggggagcgg
atccgcagcgtcctggacgggcccgtgctgagcaatatcgaccgcatcggggccgaccac
gtgcagagcctcctcctgaaacactgtgcccctgttctggcaaagctgcgcccaccgcct
gacaatcaggatgcctatcgggcagaatttgggtccctcgggcccctcctctgctcccac
gtggtcaaggcccgggcccaggctgctctgcaggctcagcaggtcaacaggactacgctg
accatcacacagccccggcccacactgaccctctcacaggcccctcagcctggccctcgg
acccctggcttgctgaaggtgccgggctccatcacactgcccgtccagacattggtgtct
gcacgagctgccgccccaccccagccttcccctcctccaaccaagtttattgtaatgtcc
tcgtcctccagcgcctcatccacccaacaggtcctgtccctcagcacctcagcccccggc
tcaggctccaccactacctctcctgtcaccaccacggtccccagcgtgcagcccattgtc
aagctggtctccaccgccaccaccgcaccccccagcactgccccctctggtccgggcagt
gtccagaagtacattgtggtctcacttccccccacaggggagggcaaggggggccctgcc
tcccacccttctcccgtccctcccccatcatcttccccatccccccttgggggcagtgcc
ctctgtggggggaaacaggaagcgggggacagcccccctccagccccaggaactccaaag
gctaatggctcccagccttccggctcaggctcccctcagcctgctccatga

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