Oryctolagus cuniculus (rabbit): 100340671
Help
Entry
100340671 CDS
T03373
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100340671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100340671
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100340671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
100340671
NCBI-ProteinID:
XP_008263532
Ensembl:
ENSOCUG00000005229
UniProt:
G1SNH0
LinkDB
All DBs
Position
13:complement(120365904..120394054)
Genome browser
AA seq
747 aa
AA seq
DB search
MRRSLAPSQLAKRKPEGRCPDDADWQPETVTPKKQKSRSESQMQECFLSPFRKPLTQLTD
RPPCLDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGIRRALHDPLEEGALVL
YEPPLLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP
LAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHR
LKNSENQTYQALDSLNTRRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELP
ILKSRDAAASEADRQLGEERLRELTGVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
TELYKRFLRQAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFEGALDI
FPPGYNSKAIEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY
VRLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE
LKELFTLEEASLSDTHDKLHCRRCVNSRQVWPPPDGSDCTSDLAQWNHSTDKRGLQDEVL
QAAWDAASTAISFVFHQRSHEEQRGVH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcttggctcccagccagctggctaagagaaagccggagggcagatgccct
gacgatgcagactggcagcctgagaccgtgactcctaagaaacagaaatccagaagcgag
agccagatgcaggaatgcttcctgtctcctttccggaaacctttgactcagctgaccgat
cgaccaccctgtctggatagcagtcaacatgaagcatttattcgaagcattttgtcaaag
cctttcaaaatccccattccaaattatcaaggtcctctaggttctcgggctttgggcctg
aaaagggctggaatccgccgggccctccacgaccctctggaagaaggtgccttagttctg
tatgagcctcccctgctgagtgcccatgaccagctgaagctagacaaggaaaaactccct
gtccatgtggttgtggatcctgtcctcagtaaggttttgcggcctcatcagagagaggga
gtgaagttcctgtgggagtgtgtcaccagtcggcgcatcccgggcagccatggctgcatc
atggctgacgagatggggctaggaaagacgctacaatgcattacattgatgtggacgctt
ctgcgccagagtccagattgcaagccagaaattgacaaggcggtggtggtgtcgccctct
agcctggtgaagaactggtacaatgaagttgggaaatggcttggaggtaggatccagcct
ctggccatcgacggaggatctaaggatgagatagaccaaaagctggaagggttcatgaac
cagcgtggagcccgggtgccatctcccattctcatcatttcctatgaaaccttccgcctt
catgttggagtcctccagaaaggaagtgttggactagtcatctgtgacgagggacataga
ctcaagaattccgagaatcagacttatcaggccttggacagcttgaataccaggcggcgg
gtactcatttctgggacccccatccagaacgatctgcttgagtatttcagcttggtacat
tttgttaactcgggcatcctagggactgcccaggaattcaagaagcattttgaactgcca
attttgaagagtcgagatgcagctgccagcgaggcagacaggcagctaggagaagagcga
ctgcgggagctcactggtgttgtgaataggtgtttgatacggaggacatctgacatcctt
tctaaatatctgcctgtgaagattgagcaggtggtttgttgtaggctgacaccccttcag
acagagttatacaagaggtttctgagacaggccaaaccagcagaagagttgcatgagggc
aagatgagtgtgtcctccctttcttctatcacctcactaaagaagctttgtaatcatcca
gctctaatctatgacaagtgtgtggaagaggaggatggctttgagggtgccttggacatc
tttccccctggttataactctaaggccatagagccacagctttcaggcaagatgctagtc
ctggattacattctggcagtgacccgaagccgcagcagtgacaaagtcgtgctggtgtcc
aattacacccagacgttggacctctttgagaaactctgtcgagctagaaggtacttgtat
gtgcgcctggatggcacgatgtccattaagaagcgggccaaggttgtggaacgcttcaat
agtccaacgagccctgacttcgtctttatgctgagcagcaaagctgggggctgtggcctc
aatctcattggggctaaccggctggtcatgtttgatcctgactggaacccagccaatgac
gaacaagccatggcccgggtttggcgtgatggtcaaaagaaaacctgctacatctaccgt
ctgctgtccgcaggaaccattgaggagaagatcttccagcgtcagagccacaagaaggca
ctcagcagctgtgtggtggacgaggagcaggatgtcgagcggcacttctccctgggcgag
ttgaaggagctctttaccctggaggaggctagcctcagtgacacgcacgacaagctgcac
tgccgccgttgtgtcaatagccgccaggtctggccaccccctgatggttctgactgcact
tcagacctggctcagtggaaccacagcactgataaacgggggctccaggatgaggtactc
caggctgcctgggatgctgcctccacggccatcagcttcgtcttccaccagcgttcccac
gaggagcagcggggtgtccactga
Oryctolagus cuniculus (rabbit): 100354266
Help
Entry
100354266 CDS
T03373
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100354266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100354266
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100354266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
100354266
NCBI-ProteinID:
XP_008253973
Ensembl:
ENSOCUG00000016478
LinkDB
All DBs
Position
3:complement(109775195..109860457)
Genome browser
AA seq
911 aa
AA seq
DB search
MRRSAAPSQLQGNSFKRLKFLPPGRSNPSPKEEIIKLNPDIKLFKGAADNSFQQSENDAR
ICSTNPLPTEENTKEINHGNNSRINCFVEASATTSLDPPPFVHPDPKEITAFRRKEDESE
SQAKYFSVVWCKASKKKHKKWEGDAVLIVKGRSFILKDLEGKDIGKGIGYNLKEFEKIEE
GQTLMVGGKEIEVMGVISSDDFSSGRCFQLGGGSPAVSSSSLTARSCFSKPFKSVCKPSS
KENRQNDFQNCKPRYDPYMPNSLVMPQPDKNHQWMFNKKCFPLVDVVIDPHLVYHLRPHQ
KEGIIFLYECVMGMRMDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLI
VTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFVQCMFYSVLIISYEMLLRSLDQI
KNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPG
ILGSLSSYRKIYEEPIIVSREPSASEEEKKLGERRAAELTCLTGLFVLRRTQEIINKYLP
PKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLSESSPHLLCIGALKKLCNHPCLLFS
TAKEKESSSSCNEDEERSLYKGLLNVFPADYNPLLFTEEESGKLQVLSKLLAVIHELRPT
EKVVLVSNYTQTLNILQEVCKRHGYAHTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSS
KAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQ
RQISKQGLSGAVVDLSKTSEHIQFSVEELKNLFTLHENSDCVTHDLLDCDCTGEKDRTGD
SLENFAVCRPCQLGPHHQKSSSRKPLSMSQLKQWKHFSAGHLNHTDPFLERIRENVSFFF
QNVTNQTAAIK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgcagcaccaagtcagttgcaggggaattccttcaaaagactaaaattt
ttacccccaggaagaagtaatccaagtccaaaagaagagattataaaactgaatccagat
ataaagttatttaagggtgctgcagataactcctttcagcagtcagaaaatgatgctaga
atatgcagtacaaaccctctgcctacagaagaaaatactaaagaaattaatcatgggaat
aattctaggataaactgtttcgttgaagcatctgccacgacctcattagatccacctcct
ttcgttcatccagaccctaaagaaataacagcatttaggaggaaagaagatgaatctgaa
agtcaggctaagtatttcagtgttgtttggtgtaaggcttcaaagaaaaaacacaagaag
tgggaaggtgatgctgttcttattgtaaaaggaaggtcatttatattaaaagatttagaa
ggcaaagacattgggaaaggcattggttataatttaaaagaatttgaaaagattgaagag
ggccaaacactgatggttggtggaaaagaaatagaggtcatgggtgtgatctcttcggat
gacttcagcagtggcaggtgttttcagcttggaggaggaagtcctgctgtctcaagttct
tctctaactgccaggagctgtttttctaaaccctttaaaagtgtctgtaaaccaagttca
aaggaaaatagacagaatgacttccaaaattgtaaaccacgctatgacccttatatgcca
aattcccttgtcatgccacaaccagacaagaaccaccagtggatgttcaataagaaatgt
ttccctcttgtggatgtagtgatagatcctcaccttgtatatcatcttcgaccacatcag
aaagaaggaatcatattcctttatgagtgtgtgatgggaatgagaatggatggcagatgt
ggagctattcttgctgatgaaatgggtttggggaaaacactgcaatgcatttcgctcatc
tggaccctacagtgtcaggggccctatggaggcaagccagtcataaagaagacacttatt
gtcacacctggaagcttggtgaataattggaggaaagaatttcaaaaatggctaggaagt
gagaggatcaagatatttaccgttgatcaggaccacaaagttgaagaatttgtccaatgt
atgttttactctgttcttataatcagttatgaaatgttacttcgttccctggatcaaatt
aagaatataaaatttgatcttctaatctgtgacgaggggcatcgtttaaagaatagtgct
attaagaccactgccgccctcattagcctgtcctgtgagaaaaggataattctaactggt
actccagttcagaatgatctccaagaattttttgcactgattgattttgtaaatccagga
atattaggctctttgtcatcttataggaaaatatatgaagaacccatcattgtatcaagg
gaaccttctgcttctgaggaagaaaagaagttaggagagagaagagcagctgaacttact
tgcctcactggactctttgttcttagaagaacccaggaaattataaataagtatcttcca
ccgaaaatagagaatgtggtcttttgccgaccaggtgcactgcagattgagctttatcga
aagttattgaattctcaggctgtcaggttctgtcttcaagggctgtcagaaagtagtcct
catctgttgtgtatcggggcacttaaaaaactctgcaatcacccctgccttttgttcagc
actgcgaaggaaaaagaatctagctcatcctgtaatgaagatgaagaaagaagtctgtac
aaaggcttgctaaacgtgttccctgctgattataaccctctcctgtttactgaggaggag
tcaggaaagctgcaggtgctgtcgaagcttttagcggttatccacgagctccgacccact
gagaaggtggtattggtatccaactatactcaaaccttgaatattttacaagaagtatgc
aagcgtcatggatatgctcatacaagacttgatggacaaacacccatctctcaaaggcag
caaattgttgatggcttcaatagtaaatactcttctgattttatttttttgttaagttca
aaagctggtggtgtgggacttaaccttattggaggatctcacttaattctctatgacatt
gattggaatccagccactgatatccaggcaatgtctagagtatggcgagatggtcagaaa
catcctgtacacatttacagactgctaaccacaggtacaatagaagagaagatctaccaa
aggcagatcagtaagcagggtctctctggggcagttgtagacctatctaagacgtctgaa
cacattcagttttcagtagaggagcttaaaaatctgttcacattgcatgaaaattcagac
tgtgttactcatgacctgcttgactgtgactgtacaggagaaaaagatcgtacaggtgat
tcactggaaaattttgcagtctgtagaccttgccagcttggtccacatcaccagaaatcc
agctcccggaaacctctatctatgtcacagctgaagcaatggaaacatttttctgcaggt
catttaaatcatacagatccttttcttgaaaggataagagaaaatgtgtcattcttcttt
cagaatgtaaccaatcaaactgcagctataaaatga
DBGET
integrated database retrieval system