KEGG   Oryctolagus cuniculus (rabbit): 100340671
Entry
100340671         CDS       T03373                                 
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100340671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100340671
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     100340671
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 Rad54_N
Other DBs
NCBI-GeneID: 100340671
NCBI-ProteinID: XP_008263532
Ensembl: ENSOCUG00000005229
UniProt: G1SNH0
LinkDB
Position
13:complement(120365904..120394054)
AA seq 747 aa
MRRSLAPSQLAKRKPEGRCPDDADWQPETVTPKKQKSRSESQMQECFLSPFRKPLTQLTD
RPPCLDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGIRRALHDPLEEGALVL
YEPPLLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP
LAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHR
LKNSENQTYQALDSLNTRRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELP
ILKSRDAAASEADRQLGEERLRELTGVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
TELYKRFLRQAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFEGALDI
FPPGYNSKAIEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY
VRLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE
LKELFTLEEASLSDTHDKLHCRRCVNSRQVWPPPDGSDCTSDLAQWNHSTDKRGLQDEVL
QAAWDAASTAISFVFHQRSHEEQRGVH
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgaggaggagcttggctcccagccagctggctaagagaaagccggagggcagatgccct
gacgatgcagactggcagcctgagaccgtgactcctaagaaacagaaatccagaagcgag
agccagatgcaggaatgcttcctgtctcctttccggaaacctttgactcagctgaccgat
cgaccaccctgtctggatagcagtcaacatgaagcatttattcgaagcattttgtcaaag
cctttcaaaatccccattccaaattatcaaggtcctctaggttctcgggctttgggcctg
aaaagggctggaatccgccgggccctccacgaccctctggaagaaggtgccttagttctg
tatgagcctcccctgctgagtgcccatgaccagctgaagctagacaaggaaaaactccct
gtccatgtggttgtggatcctgtcctcagtaaggttttgcggcctcatcagagagaggga
gtgaagttcctgtgggagtgtgtcaccagtcggcgcatcccgggcagccatggctgcatc
atggctgacgagatggggctaggaaagacgctacaatgcattacattgatgtggacgctt
ctgcgccagagtccagattgcaagccagaaattgacaaggcggtggtggtgtcgccctct
agcctggtgaagaactggtacaatgaagttgggaaatggcttggaggtaggatccagcct
ctggccatcgacggaggatctaaggatgagatagaccaaaagctggaagggttcatgaac
cagcgtggagcccgggtgccatctcccattctcatcatttcctatgaaaccttccgcctt
catgttggagtcctccagaaaggaagtgttggactagtcatctgtgacgagggacataga
ctcaagaattccgagaatcagacttatcaggccttggacagcttgaataccaggcggcgg
gtactcatttctgggacccccatccagaacgatctgcttgagtatttcagcttggtacat
tttgttaactcgggcatcctagggactgcccaggaattcaagaagcattttgaactgcca
attttgaagagtcgagatgcagctgccagcgaggcagacaggcagctaggagaagagcga
ctgcgggagctcactggtgttgtgaataggtgtttgatacggaggacatctgacatcctt
tctaaatatctgcctgtgaagattgagcaggtggtttgttgtaggctgacaccccttcag
acagagttatacaagaggtttctgagacaggccaaaccagcagaagagttgcatgagggc
aagatgagtgtgtcctccctttcttctatcacctcactaaagaagctttgtaatcatcca
gctctaatctatgacaagtgtgtggaagaggaggatggctttgagggtgccttggacatc
tttccccctggttataactctaaggccatagagccacagctttcaggcaagatgctagtc
ctggattacattctggcagtgacccgaagccgcagcagtgacaaagtcgtgctggtgtcc
aattacacccagacgttggacctctttgagaaactctgtcgagctagaaggtacttgtat
gtgcgcctggatggcacgatgtccattaagaagcgggccaaggttgtggaacgcttcaat
agtccaacgagccctgacttcgtctttatgctgagcagcaaagctgggggctgtggcctc
aatctcattggggctaaccggctggtcatgtttgatcctgactggaacccagccaatgac
gaacaagccatggcccgggtttggcgtgatggtcaaaagaaaacctgctacatctaccgt
ctgctgtccgcaggaaccattgaggagaagatcttccagcgtcagagccacaagaaggca
ctcagcagctgtgtggtggacgaggagcaggatgtcgagcggcacttctccctgggcgag
ttgaaggagctctttaccctggaggaggctagcctcagtgacacgcacgacaagctgcac
tgccgccgttgtgtcaatagccgccaggtctggccaccccctgatggttctgactgcact
tcagacctggctcagtggaaccacagcactgataaacgggggctccaggatgaggtactc
caggctgcctgggatgctgcctccacggccatcagcttcgtcttccaccagcgttcccac
gaggagcagcggggtgtccactga

KEGG   Oryctolagus cuniculus (rabbit): 100354266
Entry
100354266         CDS       T03373                                 
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100354266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100354266
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     100354266
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 AAA_34
Other DBs
NCBI-GeneID: 100354266
NCBI-ProteinID: XP_008253973
Ensembl: ENSOCUG00000016478
LinkDB
Position
3:complement(109775195..109860457)
AA seq 911 aa
MRRSAAPSQLQGNSFKRLKFLPPGRSNPSPKEEIIKLNPDIKLFKGAADNSFQQSENDAR
ICSTNPLPTEENTKEINHGNNSRINCFVEASATTSLDPPPFVHPDPKEITAFRRKEDESE
SQAKYFSVVWCKASKKKHKKWEGDAVLIVKGRSFILKDLEGKDIGKGIGYNLKEFEKIEE
GQTLMVGGKEIEVMGVISSDDFSSGRCFQLGGGSPAVSSSSLTARSCFSKPFKSVCKPSS
KENRQNDFQNCKPRYDPYMPNSLVMPQPDKNHQWMFNKKCFPLVDVVIDPHLVYHLRPHQ
KEGIIFLYECVMGMRMDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLI
VTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFVQCMFYSVLIISYEMLLRSLDQI
KNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPG
ILGSLSSYRKIYEEPIIVSREPSASEEEKKLGERRAAELTCLTGLFVLRRTQEIINKYLP
PKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLSESSPHLLCIGALKKLCNHPCLLFS
TAKEKESSSSCNEDEERSLYKGLLNVFPADYNPLLFTEEESGKLQVLSKLLAVIHELRPT
EKVVLVSNYTQTLNILQEVCKRHGYAHTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSS
KAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQ
RQISKQGLSGAVVDLSKTSEHIQFSVEELKNLFTLHENSDCVTHDLLDCDCTGEKDRTGD
SLENFAVCRPCQLGPHHQKSSSRKPLSMSQLKQWKHFSAGHLNHTDPFLERIRENVSFFF
QNVTNQTAAIK
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgagacgatctgcagcaccaagtcagttgcaggggaattccttcaaaagactaaaattt
ttacccccaggaagaagtaatccaagtccaaaagaagagattataaaactgaatccagat
ataaagttatttaagggtgctgcagataactcctttcagcagtcagaaaatgatgctaga
atatgcagtacaaaccctctgcctacagaagaaaatactaaagaaattaatcatgggaat
aattctaggataaactgtttcgttgaagcatctgccacgacctcattagatccacctcct
ttcgttcatccagaccctaaagaaataacagcatttaggaggaaagaagatgaatctgaa
agtcaggctaagtatttcagtgttgtttggtgtaaggcttcaaagaaaaaacacaagaag
tgggaaggtgatgctgttcttattgtaaaaggaaggtcatttatattaaaagatttagaa
ggcaaagacattgggaaaggcattggttataatttaaaagaatttgaaaagattgaagag
ggccaaacactgatggttggtggaaaagaaatagaggtcatgggtgtgatctcttcggat
gacttcagcagtggcaggtgttttcagcttggaggaggaagtcctgctgtctcaagttct
tctctaactgccaggagctgtttttctaaaccctttaaaagtgtctgtaaaccaagttca
aaggaaaatagacagaatgacttccaaaattgtaaaccacgctatgacccttatatgcca
aattcccttgtcatgccacaaccagacaagaaccaccagtggatgttcaataagaaatgt
ttccctcttgtggatgtagtgatagatcctcaccttgtatatcatcttcgaccacatcag
aaagaaggaatcatattcctttatgagtgtgtgatgggaatgagaatggatggcagatgt
ggagctattcttgctgatgaaatgggtttggggaaaacactgcaatgcatttcgctcatc
tggaccctacagtgtcaggggccctatggaggcaagccagtcataaagaagacacttatt
gtcacacctggaagcttggtgaataattggaggaaagaatttcaaaaatggctaggaagt
gagaggatcaagatatttaccgttgatcaggaccacaaagttgaagaatttgtccaatgt
atgttttactctgttcttataatcagttatgaaatgttacttcgttccctggatcaaatt
aagaatataaaatttgatcttctaatctgtgacgaggggcatcgtttaaagaatagtgct
attaagaccactgccgccctcattagcctgtcctgtgagaaaaggataattctaactggt
actccagttcagaatgatctccaagaattttttgcactgattgattttgtaaatccagga
atattaggctctttgtcatcttataggaaaatatatgaagaacccatcattgtatcaagg
gaaccttctgcttctgaggaagaaaagaagttaggagagagaagagcagctgaacttact
tgcctcactggactctttgttcttagaagaacccaggaaattataaataagtatcttcca
ccgaaaatagagaatgtggtcttttgccgaccaggtgcactgcagattgagctttatcga
aagttattgaattctcaggctgtcaggttctgtcttcaagggctgtcagaaagtagtcct
catctgttgtgtatcggggcacttaaaaaactctgcaatcacccctgccttttgttcagc
actgcgaaggaaaaagaatctagctcatcctgtaatgaagatgaagaaagaagtctgtac
aaaggcttgctaaacgtgttccctgctgattataaccctctcctgtttactgaggaggag
tcaggaaagctgcaggtgctgtcgaagcttttagcggttatccacgagctccgacccact
gagaaggtggtattggtatccaactatactcaaaccttgaatattttacaagaagtatgc
aagcgtcatggatatgctcatacaagacttgatggacaaacacccatctctcaaaggcag
caaattgttgatggcttcaatagtaaatactcttctgattttatttttttgttaagttca
aaagctggtggtgtgggacttaaccttattggaggatctcacttaattctctatgacatt
gattggaatccagccactgatatccaggcaatgtctagagtatggcgagatggtcagaaa
catcctgtacacatttacagactgctaaccacaggtacaatagaagagaagatctaccaa
aggcagatcagtaagcagggtctctctggggcagttgtagacctatctaagacgtctgaa
cacattcagttttcagtagaggagcttaaaaatctgttcacattgcatgaaaattcagac
tgtgttactcatgacctgcttgactgtgactgtacaggagaaaaagatcgtacaggtgat
tcactggaaaattttgcagtctgtagaccttgccagcttggtccacatcaccagaaatcc
agctcccggaaacctctatctatgtcacagctgaagcaatggaaacatttttctgcaggt
catttaaatcatacagatccttttcttgaaaggataagagaaaatgtgtcattcttcttt
cagaatgtaaccaatcaaactgcagctataaaatga

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