Oryctolagus cuniculus (rabbit): 100340755
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Entry
100340755 CDS
T03373
Symbol
SEMA5A
Name
(RefSeq) semaphorin 5A
KO
K06841
semaphorin 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100340755 (SEMA5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
Sema
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
100340755
NCBI-ProteinID:
XP_008260544
Ensembl:
ENSOCUG00000004275
LinkDB
All DBs
Position
11:86468054..86836758
Genome browser
AA seq
1074 aa
AA seq
DB search
MKGACMVAWLLSSLGVWRLAQPEPRDAARCQRAEHPVISYKEIGPWLREFRAKNAVDFSQ
LTFDPGQKELVVGARNYLFRLQLEDLSLIQAVEWECDEATRKACYSKGKSQEECQNYIRV
LLVGGDRLFTCGTNAFTPVCTSRSLSNLTEIHDQISGMARCPYSPQHNSTALLTANGELY
AATAMDFPGRDPAIYRSLGVLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH
DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQSTFLLPEL
DLIYGIFTTNVNSIAASAVCIFNLSAISQAFNGPFKYQENSRSAWLPYPNPNPNFQCGTV
DQGLYVNLTERNLQDAQKFILMHEVVQPVTTVPAFMEDNSRFSHVAVDVVQGRDTLVHIM
YLATDYGTIKKVRAPLNQSSGSCLLEEIELFPERRQEHIRSLQILHSQSVLFVGLREHVA
KVPLKRCQFYRTRSTCIGAQDPYCGWDVAMKKCTSLEESLSMTQWEQSTSACPTRNLTVD
GHFGAWSSWMPCTHTDGGAVGPCLCRSRACDSPAPQCGGWPCEGPSVEIANCSRNGGWTP
WTSWSPCSTSCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHMFWTGWG
PWERCTAQCGGGIQARRRTCENGPDCAGCSVEYQPCNTNACPELKKTTPWTPWTPVNISD
NGGHYEQRFRYTCKARLPDPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLRAGRYSA
HTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKYGGMPCLGPSLEYQECNILPCPV
DGMWSCWSSWSQCSATCGGGHYMRTRSCTNPAPAYGGDICLGLHTEEALCNTQPCPESWS
EWSDWTMCDASGIQIRARQCILLFPVGSQCSGNATESRPCVFDSNFIPEVSVARSSSVEE
KRCGEFNMFHMIAVGLSSSILGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAPLNTSITN
HINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGKTYSNAYFTDLNNYDEY
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagcctgcatggtcgcctggctgctctcgagcctgggggtgtggagactcgcc
cagcccgagccccgggacgccgcgcggtgccagagggctgagcacccggtcatctcctac
aaagaaattggcccctggttgcgcgagttcagagcgaagaatgctgtggatttctcgcag
ttaacatttgatccaggacagaaagaacttgttgtaggagcaagaaactacctcttcagg
ttgcaactggaagacctgtctctgatccaggccgtggagtgggagtgtgacgaagctacc
aggaaggcctgttacagcaagggcaagtcgcaggaggaatgtcagaactacatccgggtg
cttttggtgggcggcgaccggttgttcacctgtgggaccaacgctttcacacctgtctgc
accagccgctcgttgagtaacctgacggagatccacgaccagatcagtggcatggcccgc
tgtccctacagcccccagcacaactccacggcgctgctcacggccaacggggagctgtac
gctgccacggccatggacttcccgggacgcgatcccgccatttaccgaagcctgggcgtt
ttgccacctctccgtacggcgcagtacaactccaagtggctcaatgaaccaaacttcgtg
tcgtcctacgacatcgggaatttcacctacttcttcttccgggaaaacgccgtggagcac
gactgtgggaagaccgtgttctccagggcggcccgggtgtgcaagaacgacatcggcggg
cgcttcctgctggaggacacgtggaccacgttcatgaaggcgcgcctgaactgctcccgc
cccggcgaggtgcccttctactaccacgagctccagagcaccttcttgctgccggagctc
gacctcatctacggcatcttcaccaccaacgtgaacagcatcgctgcctcggccgtgtgc
atcttcaacctcagcgccatctcacaggctttcaacgggcccttcaagtaccaggagaac
tcccgctccgcctggctgccttatcccaatcccaaccccaacttccagtgcggcaccgtg
gaccagggcctgtacgtgaacctgaccgagaggaacctgcaggacgctcagaagttcatt
ctcatgcacgaagtggtgcagccggtgaccaccgtgccggccttcatggaggacaacagc
cgcttctcccacgtggccgtcgacgtggtgcagggcagagacacccttgtccacatcatg
tatctggccacagactacggcaccatcaagaaagtgcgggcgccgctcaatcagagttcg
ggcagctgcttgctggaggagatcgagctgttcccggagaggcggcaggagcacattcgg
agcctgcagatcctgcacagccagagcgtgctgttcgtgggcctgcgcgagcacgtggcc
aaggtgcccctgaagcggtgccagttctaccgcacgcgcagcacctgcataggggcccag
gatccttactgcggctgggacgtggcgatgaagaaatgcacaagtctcgaggagagcctg
agcatgacgcagtgggagcagagcacctcggcctgcccgaccaggaacctcaccgtggat
ggacactttggcgcgtggtcctcgtggatgccctgcacacacacggacggcggtgctgtc
ggaccctgcctgtgtcggtcccgtgcctgcgacagcccggccccgcagtgtggcggctgg
ccctgcgagggccccagcgtggaaatcgccaactgctccaggaatggcggctggaccccc
tggacctcgtggtcgccctgcagcaccagctgtgggattggcttccaggtgcggcagcgg
tcctgcagcaaccccactccccggcacgggggccgcgtgtgcgtgggacagaaccgcgag
gaaagatactgcaacgagcatctgctgtgccccccccacatgttctggacgggctggggt
ccttgggaacggtgcacagcccagtgcgggggcggcatacaagcacgtcgcaggacctgc
gagaacgggcccgactgcgcaggctgcagcgtggagtaccagccttgtaacaccaacgca
tgccccgagctgaagaagaccaccccctggaccccctggacccctgtcaacatctctgat
aatggcggccactacgagcagcgcttccggtacacgtgcaaagcccgcctgcccgacccc
aacttgctggaagtggggagacagaggattgaaatgcgatactgctccagtgatgggacc
agcggctgctccacagacgggctctctggcgatttcctgcgtgctgggaggtactctgcc
cacactgtcaacggcgcgtggtcagcctggacgtcgtggtcacagtgcagccgggactgc
agcaggggcattcggaaccggaagcgtgtgtgcaacaaccctgagcccaagtatgggggg
atgccttgcctaggcccatccctggaataccaggagtgcaacattttgccctgtccagtg
gacggcatgtggtcctgctggtcctcctggtcacagtgctcagcaacgtgcggcggcgga
cactacatgaggacccggtcgtgcacaaacccagcccctgcctacggaggagacatctgc
ctggggctgcacaccgaagaggccctctgcaacacacagccctgcccagagagctggtcc
gagtggtcagactggaccatgtgcgatgcgtccggaatccagatccgcgcccgccagtgc
atcctcctattccccgtgggcagccagtgttcgggaaatgctactgagagccggccatgc
gtttttgactccaatttcatcccagaagtatctgtggctagatccagcagcgtagaagag
aaaagatgtggagagttcaacatgttccacatgatcgccgtggggctgagcagctccatc
ctcggctgcctcctcaccctgctcgtctacacctactgccagcgctaccagcagcagtcc
cacgacgccaccgtcatccacccagtctcccctgcccctctcaacaccagcatcaccaac
cacatcaacaaactggacaagtatgactcggtggaagccatcaaggcattcaacaaaaac
aacttgatcctagaggaaagaaacaagtacttcaacccccatctcactgggaagacctac
tctaatgcctactttacagatctcaacaattatgatgagtactaa
Oryctolagus cuniculus (rabbit): 100354300
Help
Entry
100354300 CDS
T03373
Symbol
SEMA5B
Name
(RefSeq) semaphorin 5B
KO
K06841
semaphorin 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100354300 (SEMA5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
Sema
TSP1_spondin
PSI
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
100354300
NCBI-ProteinID:
XP_008265058
Ensembl:
ENSOCUG00000006139
LinkDB
All DBs
Position
14:96165954..96203686
Genome browser
AA seq
1084 aa
AA seq
DB search
MVAPRPLAVSLLLPSLTLLVSHPSRSQDVSGEPSSEQQLCALREHPTVAFEDLKPWVSNF
TYPGARDFSQLALDPSRNQLIVGARNYLFRLSLANVSLLQATEWASNEDTRRSCQSKGKT
EEECQNYVRVLLVTGRKVFLCGTNAFSPLCTSRQVGNLSRTLEKINGVARCPYDPRHNST
AVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAY
FFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNE
LQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNLSAISQAFNGPFRYQENPRAAWLPIAN
PLPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQAVTPEPCVTQDSLPQGPDTLYH
VLYIGTESGTILKALSTASRSLRGCYLEELHVLPPGRREPLRSLRILHSARALFVGLSEG
VLRVPLERCAAYRSQGACLGARDPYCGWDGKQQRCSTLEDSSNMSLWTQNITACPVRNVT
RDGGFGPWSPWQPCEHLDGDNSGSCLCRARSCDSPQPRCGGLGCLGPAIHIANCSRNGAW
TPWSSWAQCSTSCGIGFQVRQRSCSNPAPRHGGRICVGKSREERFCNEHTPCPVPIFWAS
WGSWSKCSSDCGGGVQSRRRACENGDSCPGCGVEFKTCNPDGCPEVRRNTPWTPWLPVNV
TPGGARQEQRFRFTCRAPLPDPHGLQLGRRRTETRTCPADGSGACDTDALVEDLLRSGNV
GPHALSGGWAPWGPWSSCSRDCELGFRVRKRTCTNPEPRAGGLPCVGDAAEYQDCNPQAC
PVRGAWSCWTSWSPCSASCGGGHYQRTRSCTSPAPSPGEDVCLGLHTEEALCATQACPEG
WSPWSEWGACAEDGAQSRSRHCEELAPGPGTCAGNSSQSRPCPYGEIPVILPASSMEEAT
SCAGFSLIHLVVTGVSCFLGSGLLTLAVYLSCQHCQRQSQESTLVHPATPNHLHYKGGGT
PKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYTTTYYPSPLNKHSFRPEASPGQRC
FPNS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggtggcccccagacccctggccgtgtcgctgttgctgcccagcctcaccctgctggtg
tctcatccctcccgctcccaggacgtctccggtgagcccagcagtgagcagcagctctgc
gccctgagggagcaccccaccgtggcctttgaagatctgaagccatgggtctctaacttc
acctaccccggtgcccgagatttctcccagctcgctctggacccctccaggaaccagctc
atcgtgggagccaggaactacctcttcagactcagccttgccaatgtctccctccttcag
gccacggagtgggcctccaacgaggacacacgccgctcctgccaaagcaaaggcaagacc
gaggaggaatgtcagaactacgtgcgagtcctgcttgtcaccggccggaaggtgtttctg
tgcgggaccaatgccttctccccgctctgcaccagcagacaggtggggaacctcagccgg
accctggagaagatcaacggggtggcccgctgcccctatgacccacggcacaactccaca
gccgtcatctcctcccagggcgagctctacgccgccacggtcattgacttctccggtcgg
gaccctgccatctaccgcagcctgggcagcgggccgccgctccgcactgcccagtacaac
tccaagtggctcaatgagccaaacttcgtggcagcttatgacatcgggctgtttgcctac
ttcttcctgcgggagaacgcagtggagcacgactgtgggcgcacggtgtactcgcgcgtg
gcgcgcgtgtgcaagaacgacgtgggcggccgcttcctgctggaggacacgtggaccact
ttcatgaaggcgcggctcaactgctcccgcccgggcgaggtgcccttctactacaacgag
ctgcagagtgccttccacctgcccgagcaggacctcatctatggcgtcttcaccaccaac
gtaaacagcatcgccgcttctgccgtctgcgccttcaacctcagtgccatctctcaggca
ttcaatggcccatttcgctaccaggagaaccccagggctgcctggctccccatcgccaac
cccctccccaacttccagtgcggcaccctgcccgagaccggccccaacgagaacctgacc
gagcgcagcctgcaggacgcgcagcgcctgtttctgatgagcgaggccgtgcaagcggtg
acgcccgagccctgcgttacccaggacagcttaccccagggaccagacacgctctaccac
gtgctctacatcggcaccgagtctggcaccatcctgaaggcgctgtccacggcgagccgc
agcctgcgcggctgctacctggaagaactgcacgtgctgccccccgggcgccgcgagcca
ctgcgcagcctgcgtatcctgcacagcgcacgcgcgctcttcgtggggctgagcgagggc
gtgctgcgcgtgccgctcgagaggtgcgccgcctaccgcagccagggggcgtgtctgggg
gcgcgagacccatactgtggctgggacgggaagcagcaacgttgtagcacgcttgaagac
agttccaacatgagcctctggacccagaacatcacagcgtgtcctgtgcggaatgtgacc
cgggatggaggctttggcccatggtcaccatggcaaccatgtgagcacttagatggggac
aactccggctcttgcctgtgtcgggcacgatcctgtgactccccacaacctcgctgtggg
ggccttggctgcctggggccagccatccacatcgccaactgctccaggaatggggcgtgg
acgccatggtcatcctgggcgcagtgcagcacgtcctgtggcatcggcttccaggtccgc
cagcggagttgcagcaaccctgccccccgccacgggggccgcatctgcgtgggcaagagc
cgtgaggagcggttctgtaacgaacacacgccctgcccggtgcccatcttctgggcctcg
tggggctcatggagcaagtgcagcagcgactgcgggggcggcgtgcagtcccggcggcgg
gcctgcgagaacggcgactcctgcccgggctgcggcgtggagttcaagacgtgcaacccc
gacggctgccccgaggtgcggcgcaacacgccctggacgccctggctgcccgtgaacgtg
acgccgggcggggcgcggcaggagcagcgcttccgcttcacctgccgcgcgcccctgccg
gacccgcacggcctgcagctgggcaggaggaggacggagacaagaacgtgccccgcggac
ggctccggagcctgcgacacggacgccctggtggaggacctcttgcgcagtgggaacgtt
ggcccgcacgcgctgagcgggggctgggcgccctggggcccgtggtcatcctgctcccgg
gactgcgagctgggcttccgcgttcgcaagaggacctgcacgaaccccgagccgcgcgct
ggaggtctgccgtgcgtgggcgacgccgccgagtaccaggactgcaaccctcaggcgtgc
ccagtccggggagcctggtcctgctggacctcgtggtccccatgctcagcctcctgtggc
gggggccactaccagcgcactcgctcctgcaccagccccgcgccctctcctggcgaggac
gtctgtctcgggctgcacacggaagaggcgctgtgtgccacgcaggcctgcccagaaggc
tggtcgccatggtccgagtggggtgcgtgcgctgaggatggagcccagagccgcagccgg
cactgtgaggagctggcaccggggcccggtacctgtgctgggaacagcagtcagagccgc
ccctgcccctacggcgagattcctgtgatcctgcctgcctccagcatggaggaggccacc
agctgtgcagggttcagtctcatccacctggtggtcaccggtgtctcctgcttcctgggc
tccgggctcttgaccttggctgtgtacctgtcctgccagcactgccaacgccagtcccag
gagtccacacttgtccatcccgccacccccaaccacctgcactacaagggtgggggcacc
cctaagaacgagaagtacacacccatggagttcaagaccctgaacaagaataatttgatc
cccgatgacagagccaacttctacccattgcaacagaccaatgtgtacacaaccacctac
tacccaagcccgctgaacaaacacagcttccgacccgaagcctcacctggacaacggtgc
tttcccaacagctga
DBGET
integrated database retrieval system