Oryctolagus cuniculus (rabbit): 100341377
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Entry
100341377 CDS
T03373
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03440
Homologous recombination
ocu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100341377
03460 Fanconi anemia pathway
100341377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100341377
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100341377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
100341377
NCBI-ProteinID:
XP_008269524
Ensembl:
ENSOCUG00000004604
LinkDB
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Position
19:complement(34879170..34888002)
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AA seq
560 aa
AA seq
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MALKSPLSLESSGSESEELPTFAFLKKESFSTKKRQEKVIVVVSSDSEGSCPPSPEPIGP
SPGPDTEEALPHAEPVPVLSSGSEDEEEFIPLAERLTCKFLTHKQLSPEDSSSAIRSVLD
HESNEGASCDRIPNIPAVLHGSSGRNAPSGRDPILDSPCRQPAAYRSSCPLESDSLTVTK
ANLDIPPPQKTATRGQKVRGWRQQGQASRKESPPRQQRRKKEAPAGRLKAPRPEECLKHI
VVVLDPELLQTEGGGQLLGALQSMECRCVVEAQAVPCSLSWKRRAGPSEDGEAWAEEPMV
LVVLLAEAFVSMVHNFKQGSLGSTEEGKQTLRGFVADVTARTAGKALSLVIVDQEKLFSP
QNPPKRRKQGAGHKQAKEKQQQRQPEAKTGHVVSRVDVEEALVDLQLHTDAQARIVQNWK
ELTDFACAFTKAVAEAPFKKLRDESSFSFCLESDWAGGVKVDRSGRGLALVWRRQIQQLN
RVSLEMASAVVDAYPSPQLLVQAYRRCVSVQERQNLLADIQVRRGEGVTATSRRVGPELA
RRIYLQMTTSQPDLSLDSAD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctctaaagtcaccactgtcactagaatccagtgggagtgaatccgaagagttaccc
acgttcgcctttctgaagaaggaatcattttcaaccaagaagaggcaggagaaggtcata
gtggttgtcagctcagattccgagggctcctgtccaccatcaccagagccaataggtcca
tcccctggcccagacacagaggaggcgctcccacacgcagagccagtcccggtactgagc
agtggaagtgaggacgaagaggagttcatccccttggccgagagactcacatgtaagttt
ttgacccacaagcagctgagccctgaagactcaagctctgcaattagaagcgtcttggat
catgagagtaatgaaggagcatcctgtgaccggatccccaacatccctgctgtcctccac
ggatcctcagggaggaacgcaccgagtggcagggaccctatcttggacagcccttgccgt
cagcctgcagcctaccgctcctcgtgtcccctcgagagcgacagcttgacagtgaccaaa
gcaaatcttgacatccccccacctcagaagacagccacgcgtggtcagaaggtgcgggga
tggcggcagcaggggcaagcgagccggaaggaaagccccccgagacagcagagacggaag
aaggaagcaccagctggcaggctgaaggcgccgaggccagaggagtgcttgaagcacatc
gtcgtggtgctagatccagagcttctgcagacggaaggcgggggccagctcctgggcgcg
ctgcagtccatggagtgccgctgtgtggtcgaggcgcaggccgtgccgtgcagcctcagc
tggaagagaagggccgggccgtctgaggatggagaggcctgggcggaggagccgatggtg
ctggtggtgctgctggcggaggcgtttgtatccatggtccacaactttaagcagggaagt
ctaggcagcactgaggaagggaagcaaacacttcgaggcttcgtcgctgatgtcacggca
aggacagcggggaaagctctgtcgctggtgatcgtggaccaggagaaactcttcagtccc
cagaatccaccaaagagaaggaaacagggagcaggacacaaacaggccaaggagaagcag
cagcagagacaaccggaggccaagacagggcacgtggtgtccagggtagacgtggaagag
gcactggtggatctgcagctgcacacagacgcccaggctcgaatcgtgcagaactggaag
gagctgaccgacttcgcctgcgcattcacaaaggctgtggctgaggcgcccttcaagaag
ctccgagacgagagcagcttctccttctgcctggagagtgactgggctggaggggtgaag
gtggaccgctctggcagggggcttgcactggtctggaggcggcagattcagcagctgaac
cgagtcagcctggaaatggccagtgctgttgtggatgcctacccctccccgcagctcctg
gttcaggcatatcggcggtgcgtctcggtgcaagaacgccagaatctgctggcagacatc
caggtgcgccgtggggaaggggtgacagccacctcgcgccgggttgggccggagctggcc
aggcggatctaccttcagatgaccacctcgcagccagacctctctttagacagtgccgac
tga
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