Oryctolagus cuniculus (rabbit): 100341378 Help Entry 100341378         CDS       T03373                                  Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04510   Focal adhesion ocu04520   Adherens junction ocu04530   Tight junction ocu04670   Leukocyte transendothelial migration ocu04810   Regulation of actin cytoskeleton ocu05146   Amoebiasis ocu05203   Viral carcinogenesis ocu05322   Systemic lupus erythematosus Brite KEGG Orthology (KO) [BR:ocu00001]  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     100341378  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     100341378   09174 Infectious disease: parasitic    05146 Amoebiasis     100341378   09163 Immune disease    05322 Systemic lupus erythematosus     100341378  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100341378   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:ocu04812]     100341378    04147 Exosome [BR:ocu04147]     100341378 Membrane trafficking [BR:ocu04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     100341378 Cytoskeleton proteins [BR:ocu04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      100341378 Exosome [BR:ocu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100341378   Exosomal proteins of colorectal cancer cells    100341378   Exosomal proteins of bladder cancer cells    100341378 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI Motif Other DBs NCBI-GeneID:  100341378 NCBI-ProteinID:  XP_002719567 Ensembl:  ENSOCUG00000015449 LinkDB All DBs Position 20:2999142..3101665 Genome browser AA seq 914 aa AA seqDB search MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR LPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNSRCQKIC DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYTGPDAVPGALD YMSFSTALYGESDL NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atggaccactatgattcccagcagaccaacgactacatgcagccggaggaagactgggac cgggacctgctattggacccggcctgggagaagcagcagagaaagacgttcacggcatgg tgcaactcccacctccggaaggcgggcacgcagatcgagaacatcgaggaggactttcgg gacggcctgaagctcatgctgctgctggaggtcatctcaggcgaacgcttggccaagccg gagagaggcaagatgagggtgcacaagatctccaacgtcaacaaggccctggatttcata gccagcaaaggcgtcaagttggtgtccatcggcgccgaagagatcgtggacgggaacgtg aagatgaccctgggcatgatctggaccatcatcctgcgcttcgccatccaggacatctcg gtggaagagacatcagccaaggaagggctgctcttgtggtgtcagaggaagacggcccct tacaagaatgtcaacatccaaaacttccatataagctggaaggacggcctcggcttctgt gccttgatccaccgacaccggcctgagctgatcgactacggcaagctgcgcaaggacgac cccctcacgaatctgaacacggcctttgatgtggcagagaagtacctggacatccccaag atgctggatgccgaagacatcgtcggaaccgcccggcccgatgagaaggctatcatgact tacgtgtccagcttctaccacgccttctctggagcccagaaggcggagacagcagccaac cgcatctgcaaggtgttggccgtcaaccaggagaacgagcagctgatggaagattacgag aagctggccagcgatctgctggagtggatccgccgcaccatcccgtggctggagaaccgg ctgcccgagaacaccatgcacgccatgcagcagaagctggaggacttccgggactaccgg cggctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacg ctgcagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatg gtgtcggacatcaacaacgcctggggctgcctggagcaggccgagaagggctatgaggag tggctgctgaacgagatccgcaggctggagcggctggaccacctggcggagaagttccgg cagaaggcctccatccacgaggcctggaccgacggcaaagaggccatgctgcggcagaag gactacgagacggccacgctgtcggagatcaaggccctgctcaagaagcacgaggccttc gagagcgacctggctgcccaccaggaccgtgtggagcagatcgccgccatcgcgcaggag ctcaatgagctggactattacgactcacccagtgtcaattcccgttgccaaaagatctgt gaccagtgggacaatctgggggccctaacccagaagcggagggaagctctggagcgcacg gagaagctgctggagaccattgaccagctgtacctggagtatgccaagcgggccgccccc ttcaacaactggatggagggcgccatggaggacctgcaggacaccttcatcgtgcacacc atcgaggagatccagggactgaccacagcccacgagcagttcaaggccaccctccccgat gccgacaaggagcgcctggccatcctgggcatccacaacgaggtgtccaagattgtccag acctaccacgtcaacatggccggcaccaacccctacacaaccatcacgcctcaggagatc aatggcaaatgggaccatgtgcggcagctggtgccacggcgggaccaggctctgacagag gagcacgcacgccagcagcacaatgagaggctacgcaagcagtttggggcgcaggccaac gtcatcgggccctggatccagaccaagatggaggagatcggaaggatctccatcgagatg cacgggaccctggaggaccagctcagccacctgcggcagtacgagaagagcatcgtcaac tacaagcccaagatcgaccagctggagggcgaccaccagctcatccaggaggcgctcatc ttcgacaacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagctg ctcaccaccattgccagaaccatcaatgaggtggagaaccagatcctgacccgcgacgcc aaaggcatcagccaggagcagatgaacgagttccgggcctccttcaaccacttcgatcgg gatcactccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggctat gatattggcaacgacccccagaagaagacaggcatgatggacacggatgatttccgcgcc tgcctgatctccatgggttacaacatgggagaggcagaatttgcccgcatcatgagcatc gtggaccccaaccgcctcggggtagtgaccttccaggccttcatcgacttcatgtcccgg gagacggcagacaccgatacggcggaccaagtcatggcttctttcaagattctggctggg gacaagaactacatcacggtggatgagctgcgccgcgagctgccgcccgaccaggccgag tactgcatcgcacgcatggccccctacacgggccctgatgccgtgcccggtgccctggac tacatgtccttctccacggcgctgtatggggagagcgacctctga

Oryctolagus cuniculus (rabbit): 100351066 Help Entry 100351066         CDS       T03373                                  Name (RefSeq) alpha-actinin-4 isoform X1   KO K05699   actinin alpha 1/4 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04510   Focal adhesion ocu04520   Adherens junction ocu04530   Tight junction ocu04670   Leukocyte transendothelial migration ocu04810   Regulation of actin cytoskeleton ocu05146   Amoebiasis ocu05203   Viral carcinogenesis ocu05322   Systemic lupus erythematosus Brite KEGG Orthology (KO) [BR:ocu00001]  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     100351066  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     100351066   09174 Infectious disease: parasitic    05146 Amoebiasis     100351066   09163 Immune disease    05322 Systemic lupus erythematosus     100351066  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100351066   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:ocu04812]     100351066    04147 Exosome [BR:ocu04147]     100351066 Membrane trafficking [BR:ocu04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     100351066 Cytoskeleton proteins [BR:ocu04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      100351066 Exosome [BR:ocu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100351066   Exosomal proteins of colorectal cancer cells    100351066   Exosomal proteins of bladder cancer cells    100351066 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 XisI Motif Other DBs NCBI-GeneID:  100351066 NCBI-ProteinID:  XP_051703085 LinkDB All DBs Position 5:2631283..2695492 Genome browser AA seq 911 aa AA seqDB search MVDYHAANQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWC NSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIA SKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPY KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKM LDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYER LASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTL QTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ KASIHEAWTDGKEAMLRQRDYETATLADIRALIRKHEAFESDLAAHQDRVEQIAAIAQEL NELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAPF NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANV VGPWIQTKMEEIGRISIEMHGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIF DNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKD HGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRETT DTDTADQVIASFKVLAGDKNYITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKS FSTALYGESDL NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt atggtggactaccacgcggcgaaccagtcgtaccagtacggccccagcagcgcgggcaat ggcgctggcggcggaggtagcatgggcgactacatggcccaggaggacgactgggaccgg gacctgctgttggacccggcctgggagaagcagcagcgcaagaccttcacagcctggtgc aactcccacctgcgcaaggccggcacgcagatcgagaacatcgacgaggacttccgcgac gggctcaagctcatgctcctgctcgaggtcatttcgggggagcggctccccaagccggag cgtgggaagatgagagtgcataagatcaacaacgtgaacaaagcgctggacttcatcgcc agcaaaggggtcaagctggtctccatcggggcggaagagatcgtggacggcaatgcgaag atgaccctgggcatgatctggaccatcatcctgaggttcgccatccaggatatctctgtg gaagagacctctgccaaggaggggctccttctgtggtgccagagaaagacggcgccgtac aagaacgtcaacgtgcagaacttccacatcagctggaaggatggtctcgccttcaatgcc ctgatccaccggcacaggccagagctgatcgagtatgacaagctgagaaaggatgacccc gtcaccaacctgaataatgcctttgaagtggccgagaaatacctcgacatccccaagatg ctggatgcggaagacatcgtgaacacggcccggcccgacgagaaggccataatgacctat gtgtccagcttctaccatgccttttcgggagcgcagaaggctgagactgccgccaaccgg atctgcaaggtgctggctgtcaaccaggagaacgagcacctgatggaggattacgagcgg ctggccagcgatctcctggagtggatccggcgcaccatcccctggctggaggatcgcgtg ccccagaagacgatccaggagatgcagcagaagctggaggacttccgggactaccggcgc gtgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacgctg cagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatggtg tcggacatcaacaacggctggcagcacctggagcaggccgagaagggctacgaggagtgg ctgctgaacgagatccgcaggctggagcggctcgaccacctggccgagaagttccggcag aaggcctccatccacgaggcctggaccgacgggaaggaggccatgctgaggcagcgggac tacgagacggccaccctggcggacatccgggctctcatccgcaagcacgaggccttcgag agcgacctggccgcacaccaggaccgcgtggagcagattgcggccattgcccaggagctc aacgagctggattactacgactcccacaacgtcaacacccggtgccagaagatctgcgac cagtgggacgccctgggctccctgacccacagccgcagggaggccctggagaaaacggag aagcagctggagaccatcgaccagctgcacctggagtacgccaagcgggccgctcccttc aacaactggatggagagcgccatggaggaccttcaggacatgttcattgtccacaccatc gaggagatcgagggcctcatctccgcccacgaccagttcaagtccaccctgccggatgcc gacagggagcgagaggctatcctggccatccacaaggaggcccagaggatcgccgagagc aaccacatcaagctgtcgggcagcaacccctacaccaccgtcaccccgcagatcatcaac tccaagtgggagaaggtgcagcagctggtgccgaagcgggaccacgcgctcctggaggag cagagcaagcagcagtccaatgagcacctgcgccgccagttcgccagccaggccaacgtc gtggggccctggatccagaccaagatggaggagatcgggcgcatctccatcgagatgcac ggcaccctggaggaccagctgagccacctgaagcagtacgagcgcagcatcgtggactac aagcccaacctggacctgctggagcagcagcaccagctcatccaggaggcgctcatcttc gacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctgctc accaccatcgcccgcaccatcaacgaggtggagaaccagatcctcacccgcgacgccaag ggcatcagccaggagcagatgcaggagttccgggcctccttcaaccacttcgacaaggac catggtggggcgctggggcctgaggagttcaaggcctgcctcatcagcctgggctacgac gtggagaacgaccggcagggcgacgccgagttcaaccgcatcatgagcgtggttgacccc aaccacagcggcctcgtgaccttccaagccttcatcgacttcatgtccagggagaccacg gacacggacacggccgaccaggtcatcgcctccttcaaggtcctggccggggacaagaac tacatcaccgccgaggagctgcggagggagctgccccccgaccaggccgagtactgcatc gcccgcatggcgccctaccagggccccgacgccgtgcccggcgccctcgactacaagtcc ttctccacagccctgtacggcgagagcgacctgtga

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