Oryctolagus cuniculus (rabbit): 100341393
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Entry
100341393 CDS
T03373
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K14396
polyadenylate-binding protein 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
ocu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100341393
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100341393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100341393
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100341393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SesA
Motif
Other DBs
NCBI-GeneID:
100341393
NCBI-ProteinID:
XP_017194334
LinkDB
All DBs
Position
Un
Genome browser
AA seq
410 aa
AA seq
DB search
MAAAAAAAAAARAAEAAGAAGGRGSGPWRRRHLVAGAGGEAWEGAPGGAGLESEDLEPGE
LLPEPEPEEEPPRPRAPPGIPGPGPGSGAPGNQEEEEEPGLVEGDPGDSAIEXPELEAIK
ALVREVEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEGMEADARSIYVGNVDYGA
TAEELEAHFHGCGSVNRVRILCDKFSGHPKGFAYVEFSDQESVRTSLASDESLFRGRQIK
VIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYSGFNSRPRGRIYRGRTRATSWY
SPYLKKVCIRRRERKKGGKKERNITSLFWIIKKNKAMKCLKREIQKSFSPSPNEEVIAVV
ISCAAREETNKNSLTDISGVHKENTSGEEHEAIKSALESEVLPFVHVCDF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcagcagcagcagcagcgagggctgcggaggctgcgggggctgcg
ggcggtcggggctccgggccgtggcggcggcgccaccttgtggccggggccggaggggag
gcctgggagggggccccggggggcgcaggcctggagtctgaggacctggagcctggggag
ctgctgccagagcccgagcccgaagaggagcctccccggccccgcgcacccccgggaatt
ccgggccctgggcctggctcgggagcccccggcaaccaggaggaggaggaggagccggga
ctggtcgagggtgatccgggggacagcgccattgagngaccggagctggaagcgatcaaa
gccctagtcagggaggtggaggaggaagctgagaagctaaaagagctgcagaacgaggta
gagaagcagatgaatatgagtccacctccaggcaatgctggcccagtgatcatgtctatt
gaggaggggatggaggctgacgcccgttccatctatgttggcaatgtggactatggtgca
accgcagaagagctggaagctcactttcatggctgtggttcagtcaaccgtgtgaggata
ctctgtgacaagttcagtggccatcccaaagggtttgcgtatgtagagttctcagaccaa
gagtcggtgagaacttccctggcctcagatgagtccctatttagaggaagacaaatcaag
gtgattccaaaacgaaccaacagaccaggcatcagcacaacagaccggggtttcccacgt
gcccgctaccgtgccaggaccaccaactacaacagttcccgctctagattctacagtggt
tttaacagcaggccccggggtcgcatctacaggggccggactagagcgacatcatggtat
tccccttacttaaaaaaagtgtgtattaggaggagagagaggaaaaaaggaggaaagaag
gaaaggaacatcaccagcttattttggattataaagaaaaacaaagctatgaaatgcttg
aaaagagagatccagaaaagcttctctccatcaccaaatgaagaagttattgctgttgtc
atttcatgtgctgcaagagaagaaacaaataaaaactcattaactgatatttctggagtc
cataaagaaaatacaagtggagaagaacatgaagctataaaatctgctttggaatctgaa
gtactgcccttcgtacatgtgtgtgatttttag
Oryctolagus cuniculus (rabbit): 100345355
Help
Entry
100345355 CDS
T03373
Symbol
PABPN1
Name
(RefSeq) poly(A) binding protein nuclear 1
KO
K14396
polyadenylate-binding protein 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
ocu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100345355 (PABPN1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100345355 (PABPN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100345355 (PABPN1)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100345355 (PABPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
100345355
NCBI-ProteinID:
XP_008267833
Ensembl:
ENSOCUG00000016174
LinkDB
All DBs
Position
17:43515497..43528502
Genome browser
AA seq
328 aa
AA seq
DB search
MGDPSVAPDSKFLQFAGAAGPSLSGDWRAAAAAAAAAGAAGGRGSGPGRRRHLVPGAGGE
AGEGAPGGAGDYGNGLESEELEPGELLPEPEPEEEPPRPRAPPGTPGPGPGSGAPGNQEE
EEEPGLVEGDPGDSAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGP
VIMSIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYI
EFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRS
RFYSGFNSRPRGRIYRGRARATSWYSPY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacccctccgtagcaccagatagcaagttcctccaattcgccggggcggcgggc
cccagtctgagcggcgattggcgggcggcggcggcggcggcagcagcagcgggggctgcg
ggcggtcggggctccgggccggggcggcggcgccatcttgtgcccggggccggtggggag
gccggggagggggccccggggggcgcaggggactacgggaacggcctggagtctgaggaa
ctggagcctggggagctgctgccagagcccgagcccgaagaggagccgccccggccccgc
gcacccccgggaactccgggccctgggcctggctcgggagcccccggcaaccaggaggag
gaggaggagccgggactggtcgagggtgacccgggggacagcgccattgaggacccggag
ctggaagcgatcaaagcccgagtcagggagatggaggaggaagctgagaagctaaaagag
ctgcagaacgaggtagagaagcagatgaatatgagtccacctccaggcaatgctggccca
gtgatcatgtctattgaggagaggatggaggctgacgcccgttccatctatgttggcaat
gtggactatggtgcaaccgcagaagagctcgaagctcactttcatggctgtggttcagtc
aaccgtgtgacgatactctgtgacaagttcagtggccatcccaaagggtttgcgtatata
gagttctcagacaaagagtcagtgagaacttccctggccttagatgagtccctatttaga
ggaagacaaatcaaggtgattccaaaacgaaccaacagaccaggcatcagcacaacagac
cggggtttcccacgtgcccgctaccgtgccaggaccaccaactacaacagttcccgctct
agattctacagtggttttaacagcaggccccggggtcgcatctacaggggccgggctaga
gcgacatcatggtattccccttactaa
DBGET
integrated database retrieval system