KEGG   Oryctolagus cuniculus (rabbit): 100341454
Entry
100341454         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit gamma-like 2 isoform X1
  KO
K12391  AP-1 complex subunit gamma-1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100341454
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100341454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100341454
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100341454
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptinC2 Cnd1 INTS1_R4
Other DBs
NCBI-GeneID: 100341454
NCBI-ProteinID: XP_002718132
Ensembl: ENSOCUG00000007722
UniProt: G1STN3
LinkDB
Position
17:complement(44628144..44635411)
AA seq 786 aa
MVVTSLKLQDLIEEIRGAKTQAQEREVIQRECAHIRASFRDGDPAQRHRQLAKLLYVHML
GYPAHFGQMECLKLIASPRFTDKRVGYLGAMLLLDERHDAHLLITNSIKNDLSQGFQPVQ
GLALCTLSTVGSADMCRDLVPEVEKLLLQPSPYVRKKAILTAVHMIRKAPELSSVFLPPC
TQLLQEHHHGILLTTMTLITELCERSPAALRHFRKVVPQLVQILRTLVTTGYSAEHSIAG
VSDPFLQVQILRLLRILGRSHEESSEAMNDLLAQVATNTDTSCNAGSAILFETVLTIMDI
RSAAGLRVLAVNILGRFLLNSDKNIRYVALTSLLRLVQSDHGSVQRHRPTVVECLQETDA
SLSRRALELSLALVNSSNVRAMIRELQAFLESCPPDLRADCASGILLAAERFAPSKRWHI
DTILHVLTTAGTHVRDDAVANLIQLIGGARELHAYSVCRLYSALANDISQQPLVQVAAWC
IGEFGDLLLEGNCEETEPLQVEEEEVLALLEKVLQSHLSLPATRAYALTALMKLSTRFRG
DNNRIRQVVSIYGSCVDVELQQRAVEYNTLFRKYDHMRAAILERMPLVERGGTRVEEEEK
ESNKAAQLSEAAAPVPAEPQASKLLDLLHLLDGSSGEAPCPPPQDPPPGGTLVHLLDLPC
APAPPAAIPDCKAFERDGVQLNLSFIRPPETPALLLITVTTTNSSGGDVTHFTCQAAVPK
SLQLQLQAPSGDTVPARSSLPITQLFRILNPNKAPLRLKLRLTYHHLGQSVQETFEVNNL
PVETWQ
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggtggtgacttcgctgaagctccaggatctaatcgaggagatccgtggggccaagacc
caggcgcaggagcgggaggtgatccagagggagtgcgcccacatccgggcctccttccgc
gacggggaccctgcgcagaggcaccgccagctggccaagctgctgtacgtccacatgttg
ggctaccccgcccactttggacagatggagtgtctgaaattgatcgcctcccccagattc
acagacaagagggtgggctacctgggggccatgcttctgttggatgagaggcacgatgcc
cacctactcattaccaacagcatcaagaacgacctgagccagggctttcagccagtacaa
gggctggccctgtgcacgctgagcaccgtgggctctgctgacatgtgccgggacctggtc
ccagaggtggagaagctgctgctgcagcccagcccgtacgtgcggaagaaggctatcctg
actgcagtgcacatgatccggaaagcccccgagctctctagcgtcttcctcccgccctgc
acccagctgcttcaagagcaccaccatggcatcctgctgaccaccatgacactgatcacc
gagctctgtgaacgaagtcctgcagccctcaggcacttccgaaaggtggtgccccaactg
gtgcagatcctccggaccctcgtgaccaccggctactctgcagaacacagcatcgctgga
gtcagcgaccccttcctgcaggtgcagatacttcgtctgcttcgcattctgggccggagc
cacgaggagagcagcgaggccatgaatgacttgctggcccaggtggccactaacacagac
accagctgcaatgcgggcagcgccatcctgtttgagaccgtgctcaccatcatggacatc
cgctctgcagccggcctgcgggtcctagctgtcaacattcttggccgcttcctgctcaac
agtgacaagaacattaggtatgtggccctgacatcgctgctgcggctggtgcagtccgac
cacgggtccgtgcagcggcaccggcccacggtggtggagtgtctgcaggaaaccgacgcc
tccctcagccggcgggccctggagctgagcttggccctggtgaatagctcaaatgtgcga
gccatgattcgggagctgcaggccttcctggagtcctgcccgcctgacctccgggctgac
tgtgcctcgggcatcctgctggctgcggaaaggttcgctccaagcaaacggtggcacata
gacaccatcctgcacgtgctgacaacggcaggcacccatgtgcgggatgacgcagtggcc
aacctgatccagctgattgggggggcccgggagttacacgcctactcagtgtgccgcctc
tacagtgccctggcaaatgatatctcccagcaaccgctggtgcaggtggcagcctggtgc
attggggaatttggggacctcttattagagggaaactgcgaggaaactgaaccccttcag
gtggaagaagaggaggtgttggcactgttggaaaaggtgctgcagtcccatctgtccctg
ccagccaccagagcctacgccctcacggccctcatgaagctcagcacccggttccgcggg
gacaacaaccgcatccgccaggtggtgtccatctacgggagctgcgtggacgtggagctg
cagcagcgggctgtggagtataacacgctcttccggaagtacgaccacatgagggctgcc
attcttgaaaggatgcctctggtggagcgaggcggcactcgggttgaagaggaagaaaag
gaaagcaacaaggctgcccagctttcggaagccgcggcccctgtccccgcagagccccag
gcctccaagctcttggatctgctgcacctcctggatggctcttctggggaggccccgtgc
ccgcctcctcaggatcccccccctggaggcaccttagtacacctcctcgaccttccctgt
gcacctgcacccccagctgccatccccgactgcaaagcgtttgagcgtgatggggtacag
ctgaacctctctttcattcgaccacctgaaactcctgctttgctcctgatcaccgtcacc
accaccaactcctcggggggtgacgtcacccatttcacctgccaggctgctgtgcccaag
agtttgcagctgcagctgcaggcccccagtggggacacggttccagctcggagcagcctg
cccatcacccagcttttcagaatcctcaatcctaacaaggcccccttgcggctgaagctg
cgcctcacctatcaccaccttggccagtccgtccaggagacctttgaggtgaacaacttg
cctgtggagacctggcagtaa

KEGG   Oryctolagus cuniculus (rabbit): 100349207
Entry
100349207         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit mu-2
  KO
K12393  AP-1 complex subunit mu
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100349207
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100349207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100349207
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100349207
SSDB
Motif
Pfam: Adap_comp_sub
Other DBs
NCBI-GeneID: 100349207
NCBI-ProteinID: XP_051694035
Ensembl: ENSOCUG00000024334
LinkDB
Position
Unknown
AA seq 404 aa
MSASAVFILDVKGKPLISRNYKGDVAMSEIDHFMPLLMQQEEEGSLAPLLSHGRVHFLWI
KHSNLYLVATTLKNANASLVYSFLYKTVEVGTGVSDELMDFGFPQTTDSKILQEYITQQG
NKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVVESVNLLVNANGSVLLSEIVGTIK
LKVFLSGMPELRLGLNDRVLFELTGRSKSKSVELEDVKFHQCVRLSRFDNDRTISFIPPD
GDFELMSYRLNTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSD
ADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVK
FEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtccgcctcggccgtgttcattctcgacgtgaagggcaagcccctgatcagccgcaac
tacaagggcgacgtggccatgagcgagatcgaccacttcatgcccctgctcatgcagcag
gaggaggaggggtccctggccccgctgctgagccacggccgggtccacttcctgtggatc
aaacacagcaacctctacttggtggccaccacgttgaagaacgccaacgcttccctggta
tactccttcctttataagacagtggaggtaggtactggtgtctcagatgagctcatggac
ttcggcttcccccagaccacggacagcaagatcctgcaggagtacatcacgcagcagggc
aacaagctggagacgggcaagtcgcgggtgccgcccaccgtcacgaacgccgtgtcctgg
cgctccgagggcatcaagtacaagaagaacgaagtcttcatcgacgtcgtggagtcggtc
aacctgctggtcaacgccaacggcagcgtgctgctcagcgagatcgtgggcaccatcaag
ctcaaggtgttcctgtcgggcatgccggagctgcggctcggcctcaacgaccgcgtgctc
ttcgagctcactggccgcagcaagagcaagtcggtggagctggaggacgtgaagttccac
cagtgtgtgcggctctcgcgcttcgacaatgaccgcaccatctccttcatcccgcctgac
ggcgacttcgagctcatgtcctaccggctcaacacccaggtcaagcctctcatctggatt
gagtccgtcatcgagaagttttcccacagccgggtggagatcatggtgaaggccaagggc
cagttcaagaagcagtcggtggccaacggcgtggagatttcggtgcctgtgcccagcgac
gccgactccccccgcttcaagacgagcgtgggcagcgccaagtacgtgcccgagaagaac
gtggtcatctggagcatcaagtccttcccggggggcaaggagtacctcatgcgcgcccac
ttcggcctccccagtgtggagaaggaggaggtggagggccggccccccatcggggtcaag
tttgagatcccgtacttcaccgtctccgggatccaggtccggtacatgaagatcattgag
aagagcgggtaccaggccctgccctgggtccgctacatcacacagagcggcgattatcag
ctccgtaccagctag

KEGG   Oryctolagus cuniculus (rabbit): 100351856
Entry
100351856         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit sigma-2 isoform X1
  KO
K12394  AP-1 complex subunit sigma 1/2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100351856
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100351856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100351856
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100351856
SSDB
Motif
Pfam: Clat_adaptor_s
Other DBs
NCBI-GeneID: 100351856
NCBI-ProteinID: XP_008270604
Ensembl: ENSOCUG00000004302
UniProt: G1SLH9
LinkDB
Position
X:complement(1679363..1709998)
AA seq 160 aa
MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR
YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG
EVQETSKKNVLKAIEQADLLQEKTENMYHSKSFIGCKRAY
NT seq 483 nt   +upstreamnt  +downstreamnt
atgcagtttatgctgctttttagtcgtcaggggaagcttcgactgcagaaatggtatgtc
ccactgtcagacaaagagaagaaaaagatcacaagagaacttgttcagaccgttttagca
cggaaacctaaaatgtgcagctttcttgagtggcgagatctgaagattgtttacaaaaga
tatgcaagtctgtatttttgctgtgccattgaggatcaggacaatgaactaattaccctg
gaaataattcatcgttatgtggaattacttgacaagtattttggaagtgtgtgtgaactt
gatatcatctttaattttgagaaggcttactttattttggatgagtttcttttgggagga
gaagttcaagaaacatccaagaaaaatgtccttaaagcaattgagcaggccgatctactg
caggagaaaacagagaatatgtatcacagcaagagtttcattgggtgtaagagagcgtac
tag

KEGG   Oryctolagus cuniculus (rabbit): 100352212
Entry
100352212         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit mu-1
  KO
K12393  AP-1 complex subunit mu
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100352212
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100352212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100352212
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100352212
SSDB
Motif
Pfam: Adap_comp_sub Clat_adaptor_s DUF5482
Other DBs
NCBI-GeneID: 100352212
NCBI-ProteinID: XP_051691694
LinkDB
Position
Unknown
AA seq 425 aa
MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI
KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF
GYPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVVESVN
LLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGLSGSKSKSVELEDVKF
HQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAK
SQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRA
HFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDY
QLRTQ
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtccgccagcgctgtgtacgtgctggacctgaagggcaaggtgctcatctgtcgcaac
taccgcggcgacgtggacatgtccgaagtggagcacttcatgcccatcttgatggagaaa
gaggaggaggggatgctgtcgcccatcctggcccacggtggcgtccgcttcatgtggatc
aagcacaacaacctctacttggtcgccacctccaagaagaacgcatgcgtgtctctggtc
ttctccttcctctacaaggtggtgcaggtgttctccgagtacttcaaggagctggaggag
gagagcatccgggacaacttcgtcatcatctacgagctgctggatgagctcatggacttc
ggctacccccagaccaccgacagcaagatcctgcaggagtacatcacgcagcagggcaac
aagctggagacgggcaagtcgcgggtgccgcccaccgtcacgaacgccgtgtcctggcgc
tccgagggcatcaagtacaagaagaacgaagtcttcatcgacgtcgtggagtcggtcaac
ctgctggtcaacgccaacggcagcgtgctgctcagcgagatcgtgggcaccatcaagctc
aaggtgttcctgtcgggcatgccggagctgcggctcggcctcaacgaccgcgtgctcttc
gagctcactggcctctcaggcagcaagagcaagtcggtggagctggaggacgtgaagttc
caccagtgtgtgcggctctcgcgcttcgagaatgaccgcaccatctccttcatcccgccc
gatggcgagttcgagctcatgtcctaccggctcaacacgcacgtcaagcccttgatctgg
atcgagtccgtgatcgagaagcactcccacagccgcatcgagtacatgatcaaggccaag
agccagttcaagcggcggtccacagccaacaacgtggagatccacatccctgtgcccaac
gacgcggactcgcccaagttcaagacgaccgtggggagtgtcaagtgggtgcccgagaac
agcgagatcgtgtggtccatcaagtccttccccggtggcaaggagtacctgatgcgggcc
cactttgggctgcccagcgtggaggccgaggacaaggagggcaagcccccgatcagcgtc
aagttcgagatcccctatttcactacctcaggcatccaggtgcgctacctgaagatcatc
gagaagagcggctaccaggccctgccctgggtgcggtacatcacccagaacggagattac
cagctccggacccagtga

KEGG   Oryctolagus cuniculus (rabbit): 100355117
Entry
100355117         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit gamma-1
  KO
K12391  AP-1 complex subunit gamma-1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100355117
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100355117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100355117
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100355117
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptinC2 Cnd1 INTS1_R4 Katanin_con80 DUF5609
Other DBs
NCBI-GeneID: 100355117
NCBI-ProteinID: XP_002711743
Ensembl: ENSOCUG00000004412
UniProt: G1SLS3
LinkDB
Position
5:27725287..27825885
AA seq 822 aa
MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGI
SDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIK
SESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVS
IKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHID
TIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCI
GEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCT
VNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQ
TNGETEPAPLETKPPPSGPQPTSQANDLLDLLGGNDITPVIPTAPTSKPASAGGELLDLL
GDINLTGAPAAAPAPASVPQISQPPFLLDGLSSQPLFNDIAAGIPSITAYSKNGLKIEFT
FERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGTITQ
VIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgccagcccccatcagattgcgggagctgatccggaccatccggacagctagaacccaa
gccgaagaacgagaaatgatccagaaagaatgtgctgcaatccgttcatcttttagagaa
gaagacaatacataccgatgtcggaatgtggcaaaattactgtatatgcacatgcttggc
taccctgctcactttggacagttggagtgcctcaagctcattgcatctcagaaatttaca
gacaaacgcattggctatttaggggcaatgctgctgttggatgaaagacaagatgtccat
cttctcatgaccaactgtatcaagaatgatcttaatcacagcacgcagtttgtgcagggg
ctagcactttgtacccttggctgcatgggctcgtcagagatgtgcagagatcttgcagga
gaggttgagaagcttctgaaaacctccaactcttacttaagaaaaaaggcagcattatgt
gctgttcatgtcatcaggaaggttcctgagcttatggagatgtttttaccagcaacaaaa
aatttattgaatgagaagaaccatggtgtccttcacacatctgtagtcctccttacagaa
atgtgtgagcgcagcccagacatgcttgcacatttcagaaagcttgtgccccaattagtt
cgtattctcaagaacctcattatgtccggatattcaccagaacatgatgtttctggtatc
agtgacccctttttgcaggtacgaattttgcggttattaagaattttaggacgaaatgat
gatgactcaagtgaagctatgaatgatatattagcacaggttgccactaatacagagacg
agtaagaatgtaggaaatgctattctttatgaaacagttttgactatcatggatatcaag
tcagagagtggactgcgagttctagccattaatatcctgggtcgtttcttactgaacaat
gacaagaatattagatatgtagctctgacatccttgttgaagactgtgcaaacagatcat
aatgcagtacagaggcacaggagcacaattgtggactgtctaaaagatttggatgtctca
ataaaacggcgtgcaatggaattgagttttgccctagtaaatgggaataatatccgaggc
atgatgaaggaattactttattttctggattcctgtgagccagaatttaaagcagactgt
gcatctggaatctttcttgctgcagaaaagtatgcaccttccaaacggtggcatatagac
accattatgcgtgttttgacaacggcaggaagttatgttcgtgacgatgcagttcccaat
ttgatccagttaataaccaatagtgtggagatgcatgcctatactgtccagcgcttgtac
aaagcaattcttggtgattattctcaacaacctttggtacaagtggctgcgtggtgtata
ggtgaatatggtgatcttcttgtgtctggccagtgtgaagaggaagaacctattcaggta
acagaggatgaagtgttggatattttagagagtgtcctaatttctaacatgtccacctca
gtgacacgaggttatgccctcactgccattatgaagctttctactcgattcacctgtact
gtaaaccgaattaagaaagtggtttctatctatggaagcagcattgatgtggaactccag
cagagggcagtagaatataatgcactttttaagaaatatgaccacatgaggtctgcccta
cttgaaagaatgcctgtcatggaaaaagtgactacaaatggccctactgaaattgtgcag
acaaatggagagacagaacctgctccactagagaccaaaccaccaccctctgggccacag
cctaccagccaggctaatgatttattggatttattgggaggaaatgacataacacctgtt
atcccaactgcacctacaagcaaacctgcttccgctggtggagaacttcttgatttgctg
ggagacatcaaccttacaggtgctccagctgctgctcctgcccctgcctccgtcccacag
atatcccaacccccattcttgctggatggactttcatcacagcctctcttcaacgatatt
gctgcaggcatcccctccatcacagcatacagtaagaatggcttgaagatagaattcacc
tttgaacggtcaaacaccaaccccagtgtcacagtgataacgatacaggcctccaacagc
acagagctggacatgacggactttgttttccaggctgcagtaccaaagacattccagctg
cagcttctgtctccaagcagcagcattgtcccagcatttaacacagggaccatcacacaa
gtcattaaagttctgaacccacagaagcaacagctgcgaatgcggatcaagctcacatat
aatcacaagggctcagcaatgcaagatttagcagaagtgaacaactttccccctcagtcc
tggcaatga

KEGG   Oryctolagus cuniculus (rabbit): 100355197
Entry
100355197         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit sigma-3 isoform X1
  KO
K12395  AP-1 complex subunit sigma-3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100355197
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100355197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100355197
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100355197
SSDB
Motif
Pfam: Clat_adaptor_s T1RH-like_C DUF6824
Other DBs
NCBI-GeneID: 100355197
NCBI-ProteinID: XP_051705086
Ensembl: ENSOCUG00000010806
LinkDB
Position
7:8329944..8404616
AA seq 154 aa
MIHFILLFSRQGKLRLQKWYTTLPDKERKKITREIVQIILSRGHRTSSFIDWKELKLVYK
RYASLYFCCAVENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
GEIQETSKKTAVKAIEDSDMLQETMEEYMNKPAF
NT seq 465 nt   +upstreamnt  +downstreamnt
atgatacatttcatattgctcttcagtcgacaagggaaattacggctgcagaaatggtat
accactctccccgacaaggagcggaaaaagatcacgcgggaaattgtccagatcattctt
tctcgtggtcacaggacaagcagttttattgactggaaggaactaaaacttgtctataaa
aggtatgctagtttatatttttgctgtgcagtggaaaatcaagacaatgagctgttgaca
ctagagattgtgcatcgttatgtggagttgctggacaaatattttggaaatgtctgtgag
ctggacattatttttaattttgaaaaggcttatttcatccttgatgagtttataataggt
ggagaaattcaggaaacatccaagaaaactgctgtcaaagccattgaagactccgatatg
ttacaagagaccatggaagaatacatgaacaaaccagcattttga

KEGG   Oryctolagus cuniculus (rabbit): 100356922
Entry
100356922         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
  KO
K12392  AP-1 complex subunit beta-1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100356922
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100356922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100356922
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100356922
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 HEAT Alpha_adaptinC2 PDS5 Cnd3 Arm HEAT_EZ XMAP215_CLASP_TOG NELF-A_N Arm_2 API5 FANCI_S3 Transposase_22
Other DBs
NCBI-GeneID: 100356922
NCBI-ProteinID: XP_051682458
Ensembl: ENSOCUG00000009490
LinkDB
Position
21:complement(2565215..2626211)
AA seq 946 aa
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSDLLDLNPQSINKLLTALNECTEWGQIFILDCLANYTPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPSAFVEGGRGVVHKSLPPRTASS
ESTESPETAPAGAPPGEQPDVIPTQGDLLGDLLNLDLGPPVSGPPLATSSVQMGAVDLLG
GGLDSLMGDEPEGIGGTNFAAPPTAAAPASLGAPIGSGLSDLFDLTSGVGSLSGSYVAPK
AVWLPAMKAKGLEISGTFTRQVGAISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQ
VHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGK
MDRQMFLATWKDIPNENEAQFQIRDCPLNAEAVSSRLQSSNVFTIAKRNVEAQDMLYQSL
RLTNGIWVLAELRIQPGNPNLTLSLKCRAPEVSQHVYQAYETILKN
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgactgactcaaagtatttcaccacgaccaagaaaggggagatcttcgagctgaaggcg
gagctcaacagtgacaagaaggagaagaagaaggaggcggtgaagaaagtgatcgcgtcc
atgaccgtgggcaaggacgtcagtgctctcttccccgacgtggtgaactgcatgcagacg
gacaacctggagttgaagaagctggtgtacctgtacttgatgaactacgccaagagtcag
ccagacatggccatcatggccgtcaacacctttgtgaaggactgtgaggaccccaacccc
ctcatccgtgccctggccgtgcggaccatgggctgcatccgcgtcgacaagatcacggag
tatctgtgtgagcctctccgcaagtgcctgaaggacgaagatccctatgtgcgcaaaaca
gcggccgtgtgcgtggccaagctccacgacatcaacgcccagctggtggaggaccagggc
ttcttggacacccttaaagacctcatctctgactctaaccccatggtggtggccaatgcc
gtggctgccctctcagagatcgctgagtcccaccccagcagcgacctgctcgacctgaac
ccgcagtccattaacaagctgctgacagccctgaacgagtgcaccgagtggggccagatc
ttcatcctggactgcctggccaactatacgcccaaggacgaccgcgaggcccagagcatc
tgtgagcgggtcacacccaggctctcccacgccaactctgctgtggtgctgtccgctgtg
aaggtgttgatgaaattcatggagatgctgtccaaggacctggactactacggcacactg
ctcaagaagctggccccgcccctggtcacgctgctctcagccgagcccgagctgcagtac
gtggccctgcgcaacatcaaccttattgtgcagaaaaggcctgagatcctgaagcacgag
atgaaggtcttcttcgtcaagtacaacgaccccatctacgtgaagctggagaagctggac
atcatgatccgcttggcctcccaggccaacatagcccaggtgttggcagagctgaaagaa
tatgcgacagaagtggatgtggactttgtacggaaggctgtgcgtgccatcggccgctgc
gccatcaaggtggagcaatccgcggaacgttgtgtgagcacactgctcgacctcatccag
accaaggtcaactacgtggtccaggaagccatcgtggtcattaaggacatcttccgcaag
taccctaacaaatacgagagcgtgatcgccacgctgtgcgagaacctggactccctggat
gagcctgaggcccgtgctgccatgatctggatcgtgggcgagtacgccgagcggattgac
aacgcggatgagctgctggagagcttcctcgagggcttccatgacgagagcacccaggtg
cagctgcagctgctgacagccatcgtgaagctgtttctgaagaagccaacagagacgcag
gagctcgtgcagcaggtcctcagcttggccacccaggattcggacaacccagatctgcgg
gaccggggctacatctactggcgcctgctttccacggaccccgtggccgccaaggaggtt
gtgttggccgagaagccgctcatctcggaagagacagacctcatcgagcccacgctgctg
gacgaactcatctgctacatcggcacgctggcctccgtctaccacaagccgcccagtgcc
ttcgtggaggggggccggggcgtggtgcacaagagcctgccgccccgcaccgcctcgagt
gagagtactgaaagccccgagacagcccctgccggagcaccccctggtgagcagccagat
gtcatccccacgcagggcgacctgctaggtgacctcctcaacctggacctcggccccccg
gtgagcggcccacccctggccacctcctcagtgcagatgggagccgtggatcttcttggc
ggtggcctcgacagcctgatgggggatgagcctgaagggattgggggcaccaactttgca
gcaccccccaccgcagcagcaccagccagtctcggagctcccattggcagtggcctgagt
gatctctttgacctgaccagtggcgtgggcagcctctcaggatcctacgtggcccccaaa
gcagtctggctcccggccatgaaggctaaggggctggagatctcgggcaccttcacacgc
caggtgggcgccatctccatggacctgcagctcaccaacaaggccctacaggtcatgacc
gactttgcaatccagttcaaccgcaacagctttggcctggcccccgccgcccccctccag
gtccacgcaccactgagccccaaccagactgtggagatctcgctgcctcttaacacggtg
ggctcggtcatgaagatggagcccctgaacaacctccaggtggccgtgaagaacaacata
gacgtcttctacttcagcaccttgtaccctctgcacatcctctttgtggaggacgggaag
atggaccggcagatgttcctggccacgtggaaagatatccccaatgagaacgaagcccag
ttccagatcagagactgccccctcaatgcggaggccgtgagcagcaggctgcagagcagc
aacgtcttcaccatcgccaagcggaacgtggaggcccaggacatgctctaccagtccctg
aggctgaccaatggcatctgggtgctggccgagctgcgcatacagcccggcaaccccaac
ctcacgctgtccctgaagtgtcgagcgccagaggtgtcccagcacgtgtaccaggcctat
gagaccatcctcaagaactga

KEGG   Oryctolagus cuniculus (rabbit): 100357188
Entry
100357188         CDS       T03373                                 
Name
(RefSeq) AP-1 complex subunit sigma-1A
  KO
K12394  AP-1 complex subunit sigma 1/2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04142  Lysosome
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100357188
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100357188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100357188
Membrane trafficking [BR:ocu04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100357188
SSDB
Motif
Pfam: Clat_adaptor_s DEK_C CNOT1_HEAT
Other DBs
NCBI-GeneID: 100357188
NCBI-ProteinID: XP_002722863
Ensembl: ENSOCUG00000010799
LinkDB
Position
Unknown
AA seq 158 aa
MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK
RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMG
GDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
NT seq 477 nt   +upstreamnt  +downstreamnt
atgatgcggttcatgctgctgttcagccggcagggaaagctgcgcctgcagaagtggtac
ctggccacgtccgacaaggagaggaagaagatggtgcgggagctcatgcaggtggttctg
gcccgcaagcccaagatgtgcagcttcctggagtggcgagacctcaaagtcgtctacaag
agatacgccagcctctacttctgctgcgccatcgagggccaagacaatgagctcatcacg
ctggagctgatccaccggtacgtggagctcctggacaaatacttcggcagcgtgtgcgaa
ctggacatcatcttcaacttcgagaaagcctacttcatcttggacgagtttctgatggga
ggagatgtccaggacacttcaaagaagagcgtgctgaaggctattgagcaggctgacctg
ctgcaggaggaggacgagtcgccgcgcagcgtgctggaggagatgggcctggcatag

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