Oryctolagus cuniculus (rabbit): 100341629
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Entry
100341629 CDS
T03373
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04390
Hippo signaling pathway
ocu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100341629
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100341629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100341629
Transcription factors [BR:
ocu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100341629
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100341629
NCBI-ProteinID:
XP_008264779
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Position
14:78524463..78526954
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AA seq
328 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGGGGGGGGGNGAAAAAGGNQKNSPDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNG
SYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMSSSQTYMNGSPTYSMSYSQ
QGTPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAP
SRLHMSQHYQSGPVPGTAINGTLPLSHM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagctgaagccgccgggcccgcagcagacttcggggggc
ggcggcggcggcggcggcggcggtggcggtggcggcggcggcaacggcgcggcggcggcg
gcgggcggcaaccagaagaacagcccggaccgcgtcaagcggcccatgaacgccttcatg
gtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcg
gagatcagcaagcgtctgggcgccgagtggaaacttttgtcggagacggagaagcggccg
ttcatcgacgaggccaagcggctgcgagcgctgcacatgaaggagcacccggattataaa
taccggccccggcggaaaaccaagacgctcatgaagaaggataagtacacgctgcccggc
gggctgctggcccccggcggcaacagcatggcgagcggggtcggggtgggcgccggcctg
ggcgcgggcgtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggc
agctacagcatgatgcaggaccagctgggctacccgcagcacccgggcctcaacgcgcac
ggcgccgcgcagatgcagcccatgcaccgctacgacgtgagcgcgctgcagtacaactcc
atgagcagctcgcagacctacatgaacggctctcccacctacagcatgtcctactcgcag
cagggcacccccggcatggcgctcggctccatgggctcggtggtcaagtccgaggccagc
tccagcccccccgtggttacctcttcctcccactccagggcgccctgccaggccggggac
ctccgggacatgatcagcatgtacctccccggcgccgaagtgcccgagcccgccgccccc
agcagactccacatgtcccagcactaccagagcggcccggtgcctggcacggccattaac
ggcacactgcccctctcgcacatgtga
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