KEGG   Oryctolagus cuniculus (rabbit): 100341629
Entry
100341629         CDS       T03373                                 
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04390  Hippo signaling pathway
ocu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    100341629
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100341629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocu03000]
    100341629
Transcription factors [BR:ocu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100341629
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 100341629
NCBI-ProteinID: XP_008264779
LinkDB
Position
14:78524463..78526954
AA seq 328 aa
MYNMMETELKPPGPQQTSGGGGGGGGGGGGGGGGNGAAAAAGGNQKNSPDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNG
SYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMSSSQTYMNGSPTYSMSYSQ
QGTPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAP
SRLHMSQHYQSGPVPGTAINGTLPLSHM
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagaccgagctgaagccgccgggcccgcagcagacttcggggggc
ggcggcggcggcggcggcggcggtggcggtggcggcggcggcaacggcgcggcggcggcg
gcgggcggcaaccagaagaacagcccggaccgcgtcaagcggcccatgaacgccttcatg
gtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcg
gagatcagcaagcgtctgggcgccgagtggaaacttttgtcggagacggagaagcggccg
ttcatcgacgaggccaagcggctgcgagcgctgcacatgaaggagcacccggattataaa
taccggccccggcggaaaaccaagacgctcatgaagaaggataagtacacgctgcccggc
gggctgctggcccccggcggcaacagcatggcgagcggggtcggggtgggcgccggcctg
ggcgcgggcgtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggc
agctacagcatgatgcaggaccagctgggctacccgcagcacccgggcctcaacgcgcac
ggcgccgcgcagatgcagcccatgcaccgctacgacgtgagcgcgctgcagtacaactcc
atgagcagctcgcagacctacatgaacggctctcccacctacagcatgtcctactcgcag
cagggcacccccggcatggcgctcggctccatgggctcggtggtcaagtccgaggccagc
tccagcccccccgtggttacctcttcctcccactccagggcgccctgccaggccggggac
ctccgggacatgatcagcatgtacctccccggcgccgaagtgcccgagcccgccgccccc
agcagactccacatgtcccagcactaccagagcggcccggtgcctggcacggccattaac
ggcacactgcccctctcgcacatgtga

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