Oryctolagus cuniculus (rabbit): 100343959
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Entry
100343959 CDS
T03373
Name
(RefSeq) homeobox protein MSX-2
KO
K09341
homeobox protein MSX
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100343959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100343959
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100343959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Pacs-1
Motif
Other DBs
NCBI-GeneID:
100343959
NCBI-ProteinID:
XP_002710436
Ensembl:
ENSOCUG00000009161
UniProt:
G1SWN5
LinkDB
All DBs
Position
3:55480006..55485899
Genome browser
AA seq
268 aa
AA seq
DB search
MASPSKGNDLFSSDEEGPAVVAGPGPGPGGAEGAGEERRVKVSSLPFSVEALMSDKKPPK
EASPLPADSASVGATLRPPLLLPGHGAREAHSPGPLVKPFETASVKSENSEDGAAWMQEP
GRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSL
SLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSGFSLPFPINSPLQATSLYGAS
YPFHRAVLPIPPVGLYATPVGYGMYHLS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccgtccaaaggcaatgatctgttttcgtccgatgaggagggcccggccgtg
gtggccgggccgggcccggggcctgggggcgccgagggagccggcgaggagcgccgcgtc
aaggtctccagcctgcccttcagcgtggaggcgctcatgtcggacaagaagccgcccaag
gaggcgtcgcccctgccggccgacagcgcctcggtcggggccaccctgcggccgccgctg
ctgctgccgggacacggcgcccgggaagcgcacagccccgggcctctggtcaagcccttc
gagaccgcctcggtcaagtcggagaactcagaggacggcgcggcgtggatgcaggagccc
ggccgatactcgccgccacccagacacatgagtcctaccacctgcaccctgaggaagcac
aagaccaatcggaagccacgcactcccttcaccacctcccagctcctggctctggagcgc
aagttccgtcagaaacagtacctctccatcgccgagcgcgccgagttctccagctcgctg
agcctcacagagacccaggtcaaaatctggttccagaaccgaagggccaaggcaaaaaga
ctgcaggaggcagaactggaaaagctgaaaatggccgcgaaacccatgctgccctcgggc
ttcagcctccccttccccatcaactcgcccctgcaagccacgtccctttacggagcctcc
tacccgttccatagagctgtgctccccatcccgcccgtcggactctacgccacgccagtg
ggatacggcatgtaccacttgtcctaa
Oryctolagus cuniculus (rabbit): 103345887
Help
Entry
103345887 CDS
T03373
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
103345887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
103345887
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
103345887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
103345887
NCBI-ProteinID:
XP_051685695
LinkDB
All DBs
Position
2:complement(439496..443252)
Genome browser
AA seq
303 aa
AA seq
DB search
MAPAADMTSLPLGVKVEDSAFGKPAGAGAGQAPSAAAATAAAMGADEEGAKPKVSPSLLP
FSVEALMADHRKPGAKESVLAASEGAPAAGGSAQPLGARPGGLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKPERTPWMQSARFSPPPARRLSPPACTLRKHKTNRKPRTPFT
TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKM
TAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGYSMY
HLT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgacatgacttctttgccactcggtgtcaaagtggaggactcagcc
ttcggcaagccggcgggagcaggcgcgggccaggcccccagcgccgctgcggccacggcg
gccgccatgggcgcggacgaggagggggccaagcccaaagtgtccccttcgctgctgccc
ttcagcgtggaggcgctcatggccgaccacaggaagcccggggccaaggagagcgtcctg
gcggcctccgagggcgcgccggcggcgggaggctcggcgcaaccgctgggcgcccggccc
ggggggctcggcgcgccggacgccccctcctcgccgcggccgctgggccatttctcggtg
gggggactcctgaagctgccagaagatgcgctcgtcaaagccgagagccccgaaaagccc
gagaggaccccgtggatgcagagcgcccgcttctccccgcccccggccaggcggctgagc
cccccggcctgcaccctgcgcaagcacaagaccaaccgcaagccgcggacgcctttcacc
acggcgcagctgctggcgctggaacgcaagtttcgtcagaagcagtacttgtccatcgcg
gagcgcgctgagttctccagctcgctcagcctcaccgagacgcaggtgaagatctggttc
cagaaccgccgcgccaaggccaagagactgcaggaggcggagctggagaagctgaagatg
accgccaagcccatgctgccgccggccgccttcggcctgtctttccctcttggcggcccc
gcagccgtagcggccgccgccggcgcctcgctctacagcgcctcgggccccttccagcgg
gccgcgctgcccgtggcgcccgtgggactctacacggcacacgtaggctacagcatgtac
cacctgacatag
DBGET
integrated database retrieval system