Oryctolagus cuniculus (rabbit): 100343990
Help
Entry
100343990 CDS
T03373
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100343990
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100343990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100343990
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
100343990
Prokaryotic type
Archaeal type
TFE
100343990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Zn_ribbon_OrfB
DUF7385
zf-H2C2_2
Zn_ribbon_PaaD
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
100343990
NCBI-ProteinID:
XP_002716692
Ensembl:
ENSOCUG00000002784
UniProt:
G1SIB1
LinkDB
All DBs
Position
14:complement(99168807..99200572)
Genome browser
AA seq
438 aa
AA seq
DB search
MADPDVLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERD
STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYELLRETEDVNLAYEILEPEPTEIPALKQNKDHATPTAGAAGLPSGHHREAWT
TKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKERPIWLRESTVQGAYGSEEMKEGGI
DMDAFQEREEGRAGPDDNEEVMRALLIHEKKTSSAAAGSVGAAAPAAAANGSDSESETSE
SDDDSPPRPAAVTAHHQEEDEEEDEFEEVADDPIVMVAGRPYSYSEVSQGPELVAQMTPE
EKEAYIAMGQRMFQDLFE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccggatgtcctcactgaggttccagctgcattgaagaggttagccaagtat
gtgatccgaggtttttatggcattgagcacgccttggccttggacatcttgatccgaaat
ccctgtgtgaaagaagaggatatgctggagctgctcaagtttgatcggaagcaacttcgg
tcagttttaaataatttaaagggagacaaattcatcaaatgcagaatgagagtagagact
gctgcagatgggaaaaccactcgtcataactactactttatcaattatcgtactcttgtt
aatgtggtaaaatataaattggaccacatgagaagaaggattgaaaccgatgaaagggat
tccaccaaccgggcttccttcaaatgtcctgtctgcagtagtacttttacagacttagaa
gccaatcagctttttgatcccatgacaggaactttccgctgtactttttgtcatacagag
gtagaagaggatgaatcagcaatgcccaaaaaagatgcacgcacacttttggcaaggttt
aatgaacaaattgaacccatttatgaattgcttcgagagacagaggatgtgaacttggcc
tatgaaatacttgaaccagaacccacagaaatcccagccctgaaacagaacaaggaccat
gcaacacctactgctggagctgctggcctaccaagtgggcaccaccgtgaagcatggact
accaaaggtccctcttatgaggacttatacactcagaatgttgtcattaacatggatgac
caagaagatcttcatcgagcttcactggaggggaaatctgccaaagagagacccatttgg
ttgagagagagcactgtccaaggggcatatgggtctgaagagatgaaagaaggtggtata
gatatggatgcatttcaggagcgtgaggaaggccgtgcggggcctgatgataacgaggag
gtcatgcgagcactactcattcatgagaaaaagacttcttctgctgcagcgggctcagtg
ggggcagccgctcctgctgcagctgccaatggcagtgactctgagagtgagaccagtgag
tcagatgatgactctccaccgcgaccagccgctgtgactgcacatcatcaggaagaggac
gaggaggaggatgagtttgaagaagtagcagatgaccccattgtcatggtggctggccgt
ccatactcctacagtgaagtgagccaggggccagagctggtggcccagatgacacctgaa
gagaaagaagcgtacatagcaatgggacagcgtatgtttcaggacctcttcgagtga
DBGET
integrated database retrieval system
