Oryctolagus cuniculus (rabbit): 100344446 Help Entry 100344446         CDS       T03373                                  Name (RefSeq) LOW QUALITY PROTEIN: beclin-1-like   KO K08334   beclin Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04136   Autophagy - other ocu04137   Mitophagy - animal ocu04140   Autophagy - animal ocu04215   Apoptosis - multiple species ocu04371   Apelin signaling pathway ocu05010   Alzheimer disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05022   Pathways of neurodegeneration - multiple diseases ocu05167   Kaposi sarcoma-associated herpesvirus infection Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100344446    04136 Autophagy - other     100344446    04137 Mitophagy - animal     100344446   09143 Cell growth and death    04215 Apoptosis - multiple species     100344446  09160 Human Diseases   09172 Infectious disease: viral    05167 Kaposi sarcoma-associated herpesvirus infection     100344446   09164 Neurodegenerative disease    05010 Alzheimer disease     100344446    05014 Amyotrophic lateral sclerosis     100344446    05016 Huntington disease     100344446    05017 Spinocerebellar ataxia     100344446    05022 Pathways of neurodegeneration - multiple diseases     100344446  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100344446    03029 Mitochondrial biogenesis [BR:ocu03029]     100344446 Membrane trafficking [BR:ocu04131]  Autophagy   Autophagosome formation proteins    PI3K complex     100344446 Mitochondrial biogenesis [BR:ocu03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     100344446 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  APG6 APG6_N BH3 MT V_ATPase_I DUF1140 FapA Motif Other DBs NCBI-GeneID:  100344446 NCBI-ProteinID:  XP_051692214 LinkDB All DBs Position Unknown AA seq 437 aa AA seqDB search MQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLATAQVKPGDPQEEEANSGEEAFIE TRQDGFSRRFMPPARVMSTESANSFTLIREASDSSTMENLSRRLKVTGDLFDIMSGQTDV DHPLCEECTDTLLDQLDTQLHVTENECQNYKRCLEILEQMNEVDSEQLQKELRELALEEE RLVQELEDVEKNRRTVAENLEKVQAEAEWLDQEEAQYXREYSEFKRQQLELDDELKSVEN QMHYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVL LLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKEVPLYCSGGLRFFWDKFDHAMVAFL DCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFML TNLKWGLAWVSSRFYNK NT seq 1314 nt NT seq  +upstreamnt  +downstreamnt atgcaggtgagctttgtgtgccagcgctgcagccagcccctcaagctggacacgagcttc aagatcctggaccgggtcaccatccaggagctcacagctccattacttgccacagcccag gtcaaaccaggagacccccaggaggaagaggctaactcaggagaggaagcatttattgaa actcgccaggatggtttctctcgcagattcatgcccccagccagggtgatgtctacagaa agtgccaacagcttcactctgatcagggaggcgtccgacagcagcaccatggagaacctc agccgaagactgaaggtcactggggacctttttgacatcatgtcgggccagacagacgtg gatcacccactgtgtgaggaatgcacggatactctcttagaccagctggacactcagctc catgtcaccgaaaatgagtgtcagaactacaagcgctgtttggagatcttggagcagatg aacgaggttgacagtgagcaactgcagaaggagctgagggagctggccctggaggaggaa cggctggtccaggaactggaagatgtggaaaagaaccgcagaacggtggcagaaaacctg gagaaggtccaggctgaggctgagtggctggatcaggaggaagctcagtatnncagagaa tacagtgaatttaaacgacaacagctggagctggatgatgagctgaaaagtgtggaaaat cagatgcattatgcccagatgcagctggacaagctgaagaagaccaacgtcttcaatgcg accttccatatctggcacagtgggcagtttggcacaatcaacaacttcaggctgggccgc ctgcccagtgttcctgtggaatggaatgagattaatgctgcttggggccagacagtgttg ctgcttcatgccctggccaataagatgggtctgaaatttcagaggtatcgactggtgccc tatggaaatcactcgtatctggagtctctgacagacaaatctaaggaggtgccattatac tgttctggggggttgcggtttttctgggacaagtttgaccatgcaatggtggctttcctg gactgtgtgcagcagtttaaagaagaggttgaaaagggcgagacacgtttttgtcttcca tacaggatggatgtggagaaaggcaagattgaagacacaggaggcagtggcggctcctat tccatcaaaacccagttcaattctgaggaacagtggacaaaagctctcaagttcatgctg acaaacctcaagtggggtcttgcttgggtgtcctcacgattttataacaaatga

Oryctolagus cuniculus (rabbit): 100352353 Help Entry 100352353         CDS       T03373                                  Name (RefSeq) beclin-1 isoform X1   KO K08334   beclin Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04136   Autophagy - other ocu04137   Mitophagy - animal ocu04140   Autophagy - animal ocu04215   Apoptosis - multiple species ocu04371   Apelin signaling pathway ocu05010   Alzheimer disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05022   Pathways of neurodegeneration - multiple diseases ocu05167   Kaposi sarcoma-associated herpesvirus infection Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100352353    04136 Autophagy - other     100352353    04137 Mitophagy - animal     100352353   09143 Cell growth and death    04215 Apoptosis - multiple species     100352353  09160 Human Diseases   09172 Infectious disease: viral    05167 Kaposi sarcoma-associated herpesvirus infection     100352353   09164 Neurodegenerative disease    05010 Alzheimer disease     100352353    05014 Amyotrophic lateral sclerosis     100352353    05016 Huntington disease     100352353    05017 Spinocerebellar ataxia     100352353    05022 Pathways of neurodegeneration - multiple diseases     100352353  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100352353    03029 Mitochondrial biogenesis [BR:ocu03029]     100352353 Membrane trafficking [BR:ocu04131]  Autophagy   Autophagosome formation proteins    PI3K complex     100352353 Mitochondrial biogenesis [BR:ocu03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     100352353 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  APG6 APG6_N BH3 MT HAUS-augmin3 EzrA V_ATPase_I DUF4200 Exonuc_VII_L FapA NAPRTase_C Motif Other DBs NCBI-GeneID:  100352353 NCBI-ProteinID:  XP_051681649 Ensembl:  ENSOCUG00000015964 LinkDB All DBs Position 19:complement(41044615..41058737) Genome browser AA seq 448 aa AA seqDB search MEGSKTPSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLATAQVKPGDPQEEE ANSGEEAFIETRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRFQVTGDL FDIMSGQTDVDHPLCEECTDTLLDQLDTQLHVTENECQNYKRCLEILEQMNEDDSEQLQK ELRELALEEERLVQELEDVEKNRRTVAESLEKVQAEAERLDQEEAQYQREYSEFKRQQLE LDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNE INAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWD NKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSE EQWTKALKFMLTNLKWGLAWVSSQFYNK NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt atggaggggtccaagacgcccagcagcaccatgcaggtgagcttcgtgtgccagcgctgc agccagcccctcaagctggacacgagcttcaagatcctggaccgggtcaccatccaggag ctcacagctccattacttgccacagcccaggtcaaaccaggagacccccaggaggaagag gctaactcaggagaggaagcatttattgaaactcgccaggatggtgtctctcgcagattc atccccccagccaggatgatgtctacagaaagtgccaacagcttcactctgatcggggag gcgtccgacggcggcaccatggagaacctcagccgaagattccaggtcaccggggacctt tttgacatcatgtcgggccagacagacgtggatcacccactgtgtgaggaatgcacggat actctcttagaccagctggacactcagctccatgtcaccgaaaatgagtgtcagaactac aagcgctgtttggagatcttggagcagatgaacgaggatgacagtgagcagctgcagaag gagctgagggagctggccctggaggaggaaaggctggtccaggaactggaagacgtggaa aagaaccgcagaacggtggcagaaagcctggagaaggtccaggctgaggctgagcggctg gatcaggaggaagctcagtatcagagagaatacagtgaatttaaacgacaacagctggag ctggacgacgagctgaaaagtgtggaaaaccagatgcgttatgcccagatgcagctggac aagctgaagaagaccaacgtcttcaacgcgaccttccatatctggcacagtggacagttt ggcacaatcaataacttcaggctgggccgcctgcccagtgttcctgtggaatggaatgag attaatgctgcttggggccagacagtgttgctgcttcatgccctggccaataagatgggt ctgaaatttcagaggtatcgactggtgccctatggaaatcactcgtatctggagtctctg acagacaaatctaaggagctgccattatactgttctggggggttgcggtttttctgggac aacaagtttgaccatgcaatggtggctttcctggactgcgtgcagcaatttaaagaagag gttgaaaagggcgagacacgtttttgtcttccgtacaggatggatgtggagaaaggcaag attgaagacacaggaggcagtggcggctcctattccatcaaaacccagttcaattctgag gaacagtggacaaaagctctcaagttcatgctgacaaacctcaagtggggtcttgcttgg gtatcctcacaattttataacaaatga

Oryctolagus cuniculus (rabbit): 100354712 Help Entry 100354712         CDS       T03373                                  Name (RefSeq) beclin-2   KO K08334   beclin Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04136   Autophagy - other ocu04137   Mitophagy - animal ocu04140   Autophagy - animal ocu04215   Apoptosis - multiple species ocu04371   Apelin signaling pathway ocu05010   Alzheimer disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05022   Pathways of neurodegeneration - multiple diseases ocu05167   Kaposi sarcoma-associated herpesvirus infection Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100354712    04136 Autophagy - other     100354712    04137 Mitophagy - animal     100354712   09143 Cell growth and death    04215 Apoptosis - multiple species     100354712  09160 Human Diseases   09172 Infectious disease: viral    05167 Kaposi sarcoma-associated herpesvirus infection     100354712   09164 Neurodegenerative disease    05010 Alzheimer disease     100354712    05014 Amyotrophic lateral sclerosis     100354712    05016 Huntington disease     100354712    05017 Spinocerebellar ataxia     100354712    05022 Pathways of neurodegeneration - multiple diseases     100354712  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100354712    03029 Mitochondrial biogenesis [BR:ocu03029]     100354712 Membrane trafficking [BR:ocu04131]  Autophagy   Autophagosome formation proteins    PI3K complex     100354712 Mitochondrial biogenesis [BR:ocu03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     100354712 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  APG6 APG6_N GAS CCDC22_CC FapA Motif Other DBs NCBI-GeneID:  100354712 NCBI-ProteinID:  XP_002717697 LinkDB All DBs Position 16:59939814..59941079 Genome browser AA seq 421 aa AA seqDB search MSPIFICQRCSQPLKLSEPLEMLASTQGEQGESQETGTSSEKMRGSEKLQVGASGGALPE DSNTSEDSGGFTLLGDVCSVGTLSSLQEATVQIFDILSGQKDVEHPLCEECTDNLLEQLD SQLTLVELDTQNYKRCLESGELQVEPETESLQAELRALELEEARLARELEDVDKGCARVA AALQEAEAETQELEQRERQSHREYSALKWQQLELCDQLGSIENQLWYAQAQLHWLNKTSI FQVTFEIREEGSVGIINNLRLGCLPIGPVDWNEINAAWGQVALLLLALSNTIGLEFQRYQ LIPCADHSYLKPLTGNSALLPLFSDGSQNVFLSNKFDRAMIAFLDCLQQFKEKAEKGKQG LRLPYRIRVEEGLLEDSTGSGECCALRSHLNTREQWTRALKFMLVNLKCSLAWASLRYRK S NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgtctcctatcttcatctgccagcgttgcagccagccgctgaaactgagcgagcccctg gagatgctggcctcaacacagggggagcaaggagagagccaggaaaccggcacctcctcc gaaaagatgagagggagtgaaaaactacaggtgggtgcctccggaggagcccttcccgaa gacagcaacacatcggaggacagcggcggcttcaccctgcttggggacgtttgctccgtg ggaaccttgagtagcctccaagaggccaccgtgcagatttttgacatcctctccgggcag aaagatgtggagcatccactgtgtgaggagtgtaccgacaacctcctggagcagctggac tcccagctcaccctcgtcgaacttgacactcagaactacaaacgctgcctggagtctggg gagctgcaggtggagcctgagaccgagtcgctgcaggcggagctgcgggccctggaactg gaggaggcccggctggcccgggagctggaggacgtggacaagggctgtgcaagggtagca gcggctctccaggaggccgaggcagagacacaggagctggagcagcgggagaggcagtcc cacagggagtacagtgcgctgaagtggcagcagctggagctgtgtgaccagctggggagc atagagaatcagctgtggtacgcccaggcgcagctgcactggctgaataaaaccagcatc ttccaagtcacgtttgaaatccgggaggagggctccgtgggcatcatcaacaacctccgc ttgggctgcctccccatcggccctgtggactggaacgagatcaacgctgcctggggacag gtggccttgctgctgctcgctctgtccaacacaattggcctggagttccagaggtaccag ctcatcccttgcgcagaccactcctatctgaagcctttgacaggtaactcggctctgcta cccttgttctctgatgggagccagaatgttttcctgagcaacaagttcgaccgcgccatg attgccttcctggactgcttgcagcagttcaaggaaaaggctgagaaagggaagcagggc cttcggctgccctacaggatccgagtagaggaaggcctgctggaggactccacaggcagt ggggaatgctgtgccctcaggagccatctgaacaccagggagcagtggacacgggcgctc aaattcatgcttgtcaatttgaaatgtagccttgcttgggcctccttaagatatcgtaaa agttaa

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