KEGG   Oryctolagus cuniculus (rabbit): 100345046
Entry
100345046         CDS       T03373                                 
Name
(RefSeq) protein patched homolog 1 isoform X1
  KO
K06225  patched 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04024  cAMP signaling pathway
ocu04340  Hedgehog signaling pathway
ocu04360  Axon guidance
ocu05200  Pathways in cancer
ocu05205  Proteoglycans in cancer
ocu05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    100345046
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100345046
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100345046
   05205 Proteoglycans in cancer
    100345046
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    100345046
SSDB
Motif
Pfam: Sterol-sensing Patched
Other DBs
NCBI-GeneID: 100345046
NCBI-ProteinID: XP_051703119
Ensembl: ENSOCUG00000002973
LinkDB
Position
1:complement(88462998..88529346)
AA seq 1450 aa
MASAGNAAEPQDRGGGGGGALGRPAGGGRRRRIGGLRRAAAPDRDYLHRPSYCDAAFALE
QISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLET
NVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGADVLTTEALLQHLDSAL
QASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQS
GTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKADVGRGYMDRPCLNPADPD
CPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVRNSSGKLVSAHALQTM
FQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVSANSTQKVLSFT
TTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAA
GLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKR
TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR
EDRRLDIFCCFTSPCVSRVIQVEPQAYTEAHDSTRYSPPPPYSSHSFAHETQITMQSTVQ
LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL
EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR
ETREYDFIAAQFKYFSFYNMYVVTQKADYPNIQHLLYDLHKSFSNVKYIMLEENKQLPKM
WLHYFRDWLQGLQDAFDSDWETGRIMPNNYKNGSDDGVLAYKLLVQTGSREKPIDISQLT
KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI
PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRAICNNYTSLGLSSYPNGYPFLFWEQYIG
LRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV
VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS
EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLHRLPTPSPEPPPG
VVRFAVPPSHTNNSDSSDSEYSSQTTVSGLSEELRHYEAERGAGGPAHQVIVEATENPVF
ARSTVVHPEARHHHHPPFNPRQQPHLDSGPLSPGRQSQQPRRDAPREGLRPPPYRPRRDA
FEVSTEGHAGPSHRDRSGPRGARPHHPGNTASAAGAGSVPGYRQPITTVTASASVTVAVH
PPPVPGPGPGRNPRGGLCPGYEGYPETDHGLFEDPHVPFHVHCERRDSKVEVIELQDVEC
EEQPRGGSSN
NT seq 4353 nt   +upstreamnt  +downstreamnt
atggcctcggctggtaacgccgccgagcctcaggaccgcggcggcggcggcggcggggcc
ctgggccggccggccggcggcgggaggcgtagacggatcggggggctgcgccgcgccgcc
gcgccggaccgggactatctgcaccggcccagctactgcgacgccgccttcgctctcgag
cagatttccaaggggaaggctactggccggaaagcgccgctgtggctgagagcgaagttt
cagagactcttatttaaactgggttgttacattcaaaaaaactgcggcaagttcttggtg
gtgggcctcctcattttcggggccttcgcggtgggattaaaggcagctaacctcgagacc
aacgtggaggagctctgggtggaagttggtggacgagtgagtcgtgaattaaattatact
cgccagaagattggggaagaggctatgttcaatcctcaactcatgatccagaccccgaaa
gaagaaggtgctgatgtcctgaccacagaagcactccttcaacacctggactcggcgctc
caggccagccgagtccacgtctacatgtacaacaggcagtggaaattggaacatttgtgt
tacaaatcaggagaactgatcacagagacaggttacatggatcagataatagaatacctt
tacccgtgtttaattattacacctctggattgcttctgggaaggtgctaagctccagtcc
gggacggcttacctcctggggaaacctcctttgcggtggacaaattttgaccctttggaa
ttcctggaagagttaaagaagatcaactatcaagtggacagctgggaggagatgctgaac
aaggctgacgtcggccgtgggtatatggatcgaccctgcctcaatccagcagacccagac
tgcccggccacagcccccaacaaaaactcaaccaaaccgctcgatatggcccttgttttg
aatggtgggtgtcatggattatcccgcaagtatatgcactggcaggaggagttgattgtg
ggtggtacagtccgaaacagcagtggaaagcttgtcagcgcccacgccctgcaaaccatg
ttccagctaatgacgcccaagcaaatgtacgagcacttcaagggctacgaatacgtctct
cacatcaactggaacgaggacaaggcggcagccatcctggaggcctggcagaggacatat
gtggaggtggtccatcagagcgtttccgccaactccacgcagaaggtgctgtcttttacc
accaccacactggacgacatcctcaagtcgttctccgacgtcagcgtcatccgcgtagcc
agcggctacctactcatgcttgcctacgcctgtttaaccatgctacgctgggactgctcc
aagtctcagggggccgtggggctggctggcgtcctgttggtggccctgtccgtggctgca
ggcttgggcctgtgctccttgattgggatctcctttaatgctgcaacaactcaggtcttg
ccattcctcgccctcggagtcggcgtggacgacgtcttccttctggcccacgcgttcagt
gagacggggcagaacaaaagaatcccgtttgaggaccggaccggggagtgcctcaagcgc
acgggcgccagcgtggcgctcacatccatcagcaacgtcaccgccttcttcatggccgcg
ctaatcccaattcccgctctgcgagccttctcgctccaggctgcagtggtggtggtcttc
aatttcgccatggtcctgctcatcttccctgcaatcctcagcatggatctgtatcgccgg
gaagacaggagactggacattttctgctgtttcacaagcccctgcgtcagcagagtgatt
caggtggagccgcaggcctacaccgaggcccacgacagcacgcgctacagccccccgcca
ccctatagcagccacagcttcgcccacgaaacgcagatcaccatgcagtccaccgtccag
ctccgcaccgagtacgacccccacacgcacgtgtactacaccacggccgagccgcgctcc
gagatttctgtgcagcctgtcactgtgacccaggacaccctgagctgccagagcccggag
agcactagctccacgagggacctgctctcccagttctccgactccagcctccactgcctc
gagcccccctgcaccaagtggacgctctcgtctttcgcggagaagcactacgcgcccttc
ctcctgaagcccaaagccaaggtcgtggtgatcttccttttcctgggcctgctgggggtc
agcctgtacgggaccacccgagtgagggacgggctggacctcacagacatcgtccctcgg
gagaccagagagtacgacttcatcgccgcgcagttcaaatacttctctttctacaacatg
tacgtggtcacgcagaaggccgactacccgaacatccagcacttgctgtacgacctgcac
aagagcttcagtaacgtgaagtacatcatgttggaggagaacaagcagcttcccaaaatg
tggctgcattacttcagggactggctgcaggggctccaggatgcgttcgacagtgactgg
gaaacaggcagaatcatgccgaacaattacaaaaacggatcggacgacggggttctggcc
tacaagctcctggtgcagactggcagccgcgagaagcccatcgacatcagtcagttgacg
aaacagcggctggtggacgccgatggcatcatcaaccccagcgctttctacatctacctg
acggcctgggtcagcaacgaccccgtggcgtacgccgcctcccaggccaacatccggccg
caccggcccgagtgggtgcacgacaaagccgactacatgccagaaaccaggctgagaatc
cctgccgcggaaccgatcgagtacgcccagttccctttctacctcaacggcttgcgagac
acctccgactttgtggaagcgatcgagaaagtgcgagccatttgcaacaactacacgagc
ctgggcctgtccagctaccccaacggctaccccttcctcttctgggagcagtacatcggg
ctgcgccactggctgctgctgtccatcagcgtggtgttggcctgcacgttcctcgtgtgc
gccgtcttcctcctgaacccctggacagccgggatcattgtgatggtcctggccttgatg
acagtcgagctctttggcatgatgggactcatcggcatcaagctgagcgccgtgcccgtg
gtcatcctgatcgcgtctgtcggcataggagtggaattcaccgttcacgttgctttggcc
ttcctgaccgccatcggggacaagaaccgccgggctgtgcttgccctggagcacatgttc
gcgccggtcctggacggcgccgtgtccactctgctgggggtgctgatgctggcggggtcg
gagtttgatttcattgtcaggtatttctttgctgttctggccatcctgacgatcctgggc
gttctcaacggactggtcttgctgccagtcctcttgtctttctttggaccatatcctgag
gtgtctcccgccaacggtcttcaccgactgcccaccccttcccctgagccaccccctggc
gtggtccggtttgccgtgccccccagccacaccaacaactccgactcctctgactcggaa
tacagctcccagacgaccgtgtcgggtctcagcgaggagcttcggcactacgaggctgag
cggggcgctgggggccccgcccaccaggtgatcgtggaagccacggaaaacccagtcttc
gcccgctccacggtggtccatcccgaagcgcgacatcaccatcacccgccattcaaccct
cgacagcagccccacctggactcagggcccctgtcccccggccggcagagccagcaaccc
cgcagggatgcccccagagagggcttgcggccgcccccctacagaccgcgcagagacgct
tttgaagtttctactgaagggcacgctggccccagccacagggaccgctcgggcccccgc
ggggcgcgccctcaccaccccgggaacacggcgagtgctgcgggggccggcagcgtgccg
ggctaccgccagcccatcaccactgtgacggcgtctgcttccgtgactgtggccgtgcac
cccccacccgtgccggggcccggaccggggcggaacccccgagggggcctctgccctggc
tacgagggctacccagagactgaccacgggctgttcgaggatccccacgtgcctttccac
gtccactgtgagaggagggactccaaggtggaggtcatagagctacaggacgtggagtgt
gaggagcagccccggggaggcagctccaactga

KEGG   Oryctolagus cuniculus (rabbit): 100345434
Entry
100345434         CDS       T03373                                 
Name
(RefSeq) protein patched homolog 2 isoform X1
  KO
K11101  patched 2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04340  Hedgehog signaling pathway
ocu05200  Pathways in cancer
ocu05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100345434
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    100345434
SSDB
Motif
Pfam: Sterol-sensing Patched
Other DBs
NCBI-GeneID: 100345434
NCBI-ProteinID: XP_002715724
Ensembl: ENSOCUG00000012489
LinkDB
Position
13:121893329..121907865
AA seq 1202 aa
MARPPPPGYTPPARSAAPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLFLGLLA
FGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTARQEGES
ILTPEALSLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKLFPCVI
LTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDKAQVGQ
AYVGRPCLHPDDLHCPPSAPNHHSRQAPNVAQELSGGCHGFSHKFMHWQEELLLGGTARD
PQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFVQLAQE
ALPENASQQIHAFSSTTLDDMLRAFSEVSAARVLGGYLLMLAYACVTMLRWDCAQSQGAV
GLAGVLLVALAVASGLGLCALLGISFNAATTQVLPFLALGIGVDDIFLLAHAFTEAPPGT
PLQERTGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLV
FPAVLSLDLRRRHCQRLDVLCCFSSPCSARVIQILPQELGDGTVPVGVAHLTTTVQAFTH
CEASSQHVVTILPPQAHLVPPSSDPLGSELFSPGGSTRDLLGQDEGTRQKPAHKSLPCVR
WNLAHFARYQFAPLLLQSRAKAAVLVLFGALLGLSLYGATLVQDGLALTDVVPRGTKEHA
FLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPAPQAPRTWLHYY
RNWLLGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLIQTGDAQEPLDFSQLTTRRLV
DKEGLIPPELFYVGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPL
EFAQFPFLLRGLRKTADFVEAIEGARAACAEAGRAGVRAYPSGSPFLFWEQYLGLRRCFL
LAVCILLVCTFLVCALLLLNPWTAGLIVLVLAMMTMELFGIMGFLGIKLSAIPVVILVAS
VGIGVEFTVHVALGFLTAQGSRNLRAARALEHTFAPVTDGAVSTLLGLLMLAGSNFDFIV
RYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEVMQMYKESPEALSPTAPREGGLRWGI
SPTLPQSFARVTTSMTVALHPPPLPGAYIHAASDEPTWSPATTPAASGPGSPNSRGPCPA
TE
NT seq 3609 nt   +upstreamnt  +downstreamnt
atggcccgaccgccgccccctggctacacgcccccagctcggtccgcagcaccccagatc
ctagctgggagcctgaaggctcctctctggctccgggcttacttccagggcctgctcttc
tctctgggctgcgggatccagagacactgtggcaaagtgctcttcctgggactgttggcc
tttggggccctggcactgggtctccgcgtggccattattgagacagacctggaacagctc
tgggtagaagtaggcagccgggtgagccaggagctgcattacaccaaagagaagctggga
gaggaggccgcttacacctcccagatgctgatacagaccgcccgccaggaaggggagagc
atcctcacgcctgaggcactcagcctccacctccaggcagccctcactgccagcaaagtg
caagtgtcactctacggaaagtcgtgggatctgaacaaaatctgctacaagtcaggagtt
cctctcatcgaaaatggcatgattgagcggatgatcgagaagctgttcccctgcgtgatc
ctgacgcccctcgactgcttctgggagggagccaaactccagggcggctctgcctacctg
ccgggccgccctgacatccagtggaccaacctggatcctgagcagctgctggaggaactg
ggccccttcgcctcccttgagggcttccgggagctgctagacaaggcgcaggtgggccag
gcctacgtggggcggccctgtctgcacccagacgacctccactgcccacccagtgcgccc
aaccatcacagcaggcaggctcctaacgtggctcaggagctgagcgggggctgccacggc
ttctcccacaaattcatgcactggcaggaggaattgctgctgggaggcacggccagagac
ccccaagggcagctgctgagggcagaggccctgcagagcaccttcctgctgatgagcccc
cgccagctgtacgagcacttccggggcgactaccagacacatgacatcggctggagcgag
gagcaggccggcacggtgctgcaggcctggcagcggcgctttgtgcagctggcccaggag
gccctgcccgagaacgcctcccagcagatccacgccttctcctccaccaccctggacgac
atgctgcgagcgttctcggaagtcagcgccgcgcgcgtgctgggaggctatctgctcatg
ctggcctatgcctgcgtgacaatgctacggtgggactgtgcccagtcccagggtgctgtg
ggccttgccggggtgctgctggtggccctggccgtggcctcaggtctcgggctgtgcgcc
ctgctcggtatctccttcaatgctgccactacccaggtgctgcccttcttggcactgggc
atcggcgtggatgacatattcctgctggcgcacgccttcacagaggctccacccggcacc
cctctccaggagcgcacaggtgagtgtctgcagcgcacaggcaccagtgtcgccctcacg
tccatcaacaacatggtcgccttcttcatggctgccctggttcccatccccgccctgagg
gccttctccctgcaggcagccatagtggttggctgcaactttgcagccgtgatgcttgtc
ttcccagccgtcctcagcctggacctgcgccggcgccactgccagcgccttgacgtcctc
tgctgcttctctagcccctgctctgctcgagtgattcagattctgccccaggagctgggg
gacgggacagtaccggtgggcgttgcccacctcaccaccacggttcaagcctttacccac
tgtgaagccagcagccagcatgtagtcaccatcctacctcctcaagcccacctggtgccc
ccctcttctgacccactgggctctgagctcttcagccctggaggatccacgcgggacctt
ctaggccaggacgagggcacgaggcagaagccggcacacaagtccctgccctgcgttcgc
tggaatcttgcccatttcgcccgctatcagtttgcacccttactgctgcagtcacgtgct
aaggccgcagtgctggtgctgtttggggctcttctgggcctgagcctctacggagccacc
ttggtgcaggacgggctggccctgacagatgtggtgcctcggggcaccaaggagcatgcc
ttcctgagcgcccagctcaggtacttctccttgtacgaggtggccctggtgacccagggc
ggctttgactacgcccactcccaacgcgccctctttgatctgcaccagcgcttcagttcc
ctcaaggctgtgctgcccccacctgccccccaggcgcctcgcacctggctgcactattac
cgcaactggctgctgggaatccaggctgcatttgaccaggactgggcttccggccgcatt
acccgccactcataccgcaatggctctgaggacggggcactggcctacaagctgctcatc
cagactggggatgcccaggagcctctggatttcagccagctgaccacaaggaggctggtg
gacaaggaggggctcatcccacccgaactcttctacgtggggctaaccgtgtgggtgagc
agtgaccccctggggctggcagcctcccaggccaacttctaccccccacctcccgaatgg
ctgcatgataaatacgacaccaccggggagaacctgcgcatccctgcagcccagccgctg
gagtttgcccagttccccttcctgctgcgcggcctccggaagactgcagacttcgtggag
gccatcgagggagcccgggcagcgtgtgcagaggcaggccgggctggggtgcgcgcctac
cccagcggctcccccttcctcttctgggagcaatacctgggcctgcgacgctgcttcctg
ctggctgtttgcatcctgctggtgtgcaccttccttgtctgtgccctgctgctgcttaac
ccctggacagctggactcatcgtgctggtcctggcgatgatgaccatggagctctttggt
atcatgggtttcctgggcatcaagctgagcgccatccccgtggtgatcctcgtggcttcc
gtaggcatcggtgtcgagttcacagtccacgtggctctgggcttcctgacagcccaggga
agccggaacctgcgggctgcccgtgccctggagcacacatttgcccccgtgaccgatgga
gctgtctccacactgctgggtctcctcatgcttgctggttccaacttcgacttcatcgta
aggtacttcttcgtggtgctgacagtgctcacgctcctgggcctcctgcacggacttgtg
ctgctgcctgtactgctgtccatcctgggcccacccccagaggtgatgcagatgtacaag
gagagcccggaggccctgagccccacagctccacgggaaggcgggctcaggtgggggata
tcccccaccctgccccagagtttcgccagagtgactacctccatgaccgtggccctccac
ccacctccgctgcctggtgcctatatccacgccgcctctgacgagcccacttggtcccct
gctaccaccccagctgccagcgggcctggcagccccaattctagaggaccctgtccggcc
actgagtga

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