Oryctolagus cuniculus (rabbit): 100345380
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Entry
100345380 CDS
T03373
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04350
TGF-beta signaling pathway
ocu04919
Thyroid hormone signaling pathway
ocu05016
Huntington disease
ocu05169
Epstein-Barr virus infection
ocu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100345380
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100345380
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100345380
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100345380
09164 Neurodegenerative disease
05016 Huntington disease
100345380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345380
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100345380
REST complex
100345380
Heterochromatin formation proteins
Other heterochromatin formation proteins
100345380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
100345380
NCBI-ProteinID:
XP_051690560
Ensembl:
ENSOCUG00000003266
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MKRRLDDPESPVYAAQQRRLPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSSHHHPAAVQPHGGQVVQSHTHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPAPAKVSKPSQLQAHAPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGSYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSPLAEASKHGAGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGAPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAARKHNGVGGSPPKSKLLFSNTAAQKLRGMEDVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENSNGATGGQLSTQTARSLLESTYQRKAEQLMSDENCFKLMFVQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGGSRKPLESVDSLDKLECRFQLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSRWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTGFKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtttggatgaccccgagtcaccggtgtacgcggcccagcagcgtcggctc
cctggcagcacggaggctttcccacaccagcaccgcgtgctcgcgcccgcccctccggtg
tacgaggcagtgtccgagaccatgcagtcagccacgggcatccagtactcagtgaccccc
agctaccaggtgtcagctgtgccgcagagctctggaagtcacgggcccgccatcgcagcg
gtgcacagcagccaccatcaccctgcagctgtacagccccatggaggccaggtggtgcag
agtcacacgcacccagccccgcccgtcgcaccagtgcaggggcagcagcagtttcagagg
ctcaaggtggaggatgcgctgtcttacctggaccaggtgaagctgcagttcggtagtcag
cctcaggtctacaacgatttccttgacatcatgaaggaatttaaatctcagagcatcgac
actccaggagtgattagtcgtgtctcccagctgttcaaaggccaccctgacctgatcatg
ggcttcaacacattcttgccccctggctacaaaattgaggtgcaaaccaatgacatggtg
aacgtgacaactcctggccaggttcatcagatccccacgcacggcatccagccccagcct
cagccaccaccccagcatccttcccagccttcggcacagtcagccccagctcctgcccag
ccggctcctcagcctgcacctgccaaagtcagcaagccttcccagctgcaagcacatgcc
ccagccagtcagcagactcccccgctccctccgtatgcatccccgcgctctccgccggtg
cagcctcacaccccggtgaccatctcgctgggaacggccccgtctctgcagaacaatcag
cctgtggagttcaaccacgccatcaactatgtgaacaagatcaagaaccggttccagggg
cagccagacatctacaaagccttcctggagattctgcacacctatcagaaagagcagcgg
aatgccaaggaagctgggggcagttacactccagcgctgacggagcaagaggtgtatgcc
caggtggctcgtctgttcaaaaaccaggaagacctgctgtccgagtttggacagttcctc
ccagatgccaacagttccgtgcttttaagcaaaacaacagctgagaaggttgattcggtg
agaaatgaccatggaggcaccgtgaagaagccccagctaaacaacaagccgcagaggccg
agccagaacggctgccagatccgcaggcactctggcacgggagccacgcccccggtgaag
aagaaacctaagctgctcagcctaaaggactctcccctggcggaggccagcaagcacggt
gctggcacggagtccttgttttttgataaggtccgaaaggccctgcgcagtgctgaggcc
tatgagaacttcctgcgctgcctggtgatcttcaaccaggaggtgatctctcgggccgag
ctcgtgcagctcgtctcgccttttctggggaaattccctgaactgttcaattggttcaaa
aacttcctgggctataaggagtctgtgcacctggaaaccttcccaaaggaacgcgccacc
gagggcatcgccatggagatcgactacgcctcgtgtaaacggctgggctccagctaccgc
gccctgcccaagagttaccagcagcccaagtgtacagggcggaccccgctctgtaaagag
gttctgaatgacacctgggtctccttcccttcatggtccgaggactccaccttcgttagc
tccaagaagacgcagtacgaagaacacatttaccgctgcgaagatgagcgcttcgagctg
gatgtagttttggagaccaatctggcaaccatccgggttttggaagcaatacagaaaaag
ctttcgcgcttgtctgccgaggagcaggccaagttccgcctggacaacacgcttggcggc
acgtcggaggtgatccaccgcaaagctctgcagaggatatatgccgacaaggccgccgac
atcatcgatggcctgcgcaagaacccctccatcgctgtgcccatcgtcctcaagaggctg
aagatgaaagaggaggagtggcgagaagctcagagaggcttcaacaaggtgtggcgagag
cagaacgagaagtactacctgaagtctctggaccaccagggcatcaacttcaagcagaac
gacacgaaggtgctgcgctccaagagcctgctcaacgagatcgagagcatctacgacgag
aggcaggagcaggctacggaagagaacgctggtgcacctgtaggcccacacctgtcgctc
gcctacgaggacaagcagatcctggaggacgcggctgctctgatcatccaccacgtgaag
cggcagacgggcatccagaaggaggacaagtacaagatcaagcagatcatgcatcacttc
attcccgacctgctcttcgctcagcgaggtgacctctcggatgtggaggaggaggaggag
gaggagatggatgtggatgaagctaccggggccgccaggaagcacaacggtgtcgggggc
agccccccgaagtccaagctgctgttcagtaacacagcagcccagaagctgcgggggatg
gaggacgtgtacaacctgttctacgtcaacaacaactggtacatcttcatgcggctgcac
cagatcctctgcttgcggctgctgcggatctgctcccaggccgaacggcagattgaagaa
gagacccgcgagagagagtgggagcgagaggtgttgggcataaaacgagacaagagcgac
agtcctgccatccagctacgcctcaaggagcccatggatgttgacgtagaggattattac
ccggcgttcctggacatggtgcggagcctgctggacggcaacatagacgcgtcgcagtat
gaagactcgctgcgggagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcattgtgcgacagctgcagcacatcgtgagtgatgagatctgtgtgcag
gtgaccgacctctacctggcagaaaacagcaacggggccaccggaggccagctcagcacc
cagacggccaggagcctgctggagtcgacgtatcagcgcaaggccgagcagctcatgtca
gatgagaactgtttcaagctcatgttcgtccagagccaaggccaggtccagctgactatc
gagcttctggacacagaggaggagaactcggatgaccctgtggaggcagagcgctggtcg
gactacgtggagcgatacatgaactccgacaccacctctcctgagctccgcgagcacctg
gcccagaagcccgtgtttctcccgaggaatctgcggcggatccggaagtgccagcgtggc
cgcgagcagcaggagaaggaagggaaggagggcggcagcaggaagccgctggagagcgtg
gacagcctggacaagctggagtgcaggttccagctgaactcgtacaagatggtgtacgtc
atcaagtcggaggactacatgtaccgccgcaccgccctgctgcgcgcccaccagtcccat
gaacgcgtaagcaaacggctacatcagaggttccaggcctgggtagacaaatggaccaag
gagcatgtgccccgggagatggcggccgagaccagcaggtggctcatgggcgaggggctg
gagggcctggtgccctgcaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgcgtcaagtacggcaccggcttcaaggccccgtaa
DBGET
integrated database retrieval system
