KEGG   Oryctolagus cuniculus (rabbit): 100346739
Entry
100346739         CDS       T03373                                 
Name
(RefSeq) nucleoprotein TPR isoform X2
  KO
K09291  nucleoprotein TPR
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
ocu05014  Amyotrophic lateral sclerosis
ocu05200  Pathways in cancer
ocu05216  Thyroid cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100346739
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100346739
  09162 Cancer: specific types
   05216 Thyroid cancer
    100346739
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100346739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100346739
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100346739
SSDB
Motif
Pfam: TPR_MLP1_2 Seryl_tRNA_N Intein_splicing
Other DBs
NCBI-GeneID: 100346739
NCBI-ProteinID: XP_008266965
Ensembl: ENSOCUG00000012261
LinkDB
Position
16:complement(1487051..1550539)
AA seq 2360 aa
MAAVLQQVLERAELNKLPKAVQSKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVHETRECQSLRTELEKLNNQLKVLTEKNKELESAQDRTTAIQNQLTRTKEEL
EAEKRDLIRTNERLSQELEYLSEDIKRVNEKLKESNTTKGELQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQM
NGLKTSNEHLQKHVEDLLTKSKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKELLEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVEAQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLRLESSLTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLEDISLMSTPKRSSTSQTVSTPAPGPVI
ESTEAIEAKAALKQLQEIFENYKKEKADNEKVQNEQLEKLQEQVTDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSNQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKE
IATLKQHLSNVEVQLASQSSQRTGQSSDKEDVDDLLSQLRQAEEQLNDLKERLKTSASNV
EQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDK
RKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKMAVEAQNKY
ERELMLHAADVEALQAAKEQVSKMASARQHLEETTQKAESQLLECKASWEERERMLKDEV
SKCMSRCEDLEKQNRLLHDQIENLSDKVVASMKEGAQGPLNVSLSEEGKSQEQILEILRF
IRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEEL
MKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQ
AEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEVGRLKAEI
ARSNASLTNNQNLIQSLKEDLNKIRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYK
TQYEELKAQQDKVMETSAQSSGDHQEQHVSMQEMQELKETLNQAETKSKSLENQVENLQK
TLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKS
KIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQE
RHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKVT
AAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFG
STSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVVQ
SSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDNAIEAPDQVSDDTVEMPLPKKLKSV
TPVGTEEEAMAEESTDGEVEPQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGP
LQTDQQTTTSSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEEDEEDDDDDEDDTGMG
DEGEDSNEGTGSADGNDGYEADDAEGGEGTDPGTETEESMGGGESNQRAADSQNSGDGNT
GPAESFSQEISREQQPSSASERQAPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQM
TRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPR
FRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVT
VFTESTTSDASEHASQSVPMVTTSTGALSTTNETAAADDGDEVFVEAESEGISSEAGLEI
DSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFNR
QRGVSHAMGGRGGINRGNIN
NT seq 7083 nt   +upstreamnt  +downstreamnt
atggcggccgtgctgcagcaagtcctggagcgcgcggagctcaacaagctgcccaaggcc
gtgcagagcaaactggagaagtttctcgccgaccagcagtcggagatcgacggcctgaag
gggcggcacgagaagttcaaggtggagagcgaacaacagtactttgagatagagaagagg
ctgtcccacagtcaggagagacttgtgcatgagacccgagagtgccagagcctaaggacg
gagctggagaagctgaacaatcaactgaaggtactgactgagaaaaacaaagagttggaa
agtgctcaagaccgcactactgccattcagaaccaacttacaagaacaaaggaagaatta
gaagctgagaaaagagacttgattagaaccaatgaaagactatctcaagaacttgaatat
ttatcagaggacattaaacgtgtaaatgaaaaactgaaagaaagcaatactacaaagggt
gaacttcagttaaaattggatgagcttcaagcttctgatgtttctgttaagtatcgggaa
aagcgcttggagcaagaaaaggaattgctacataatcagaatacatggctaaatacagag
ttgaaaaccaaaactgatgaacttctggctcttggaagagaaaaaggaaatgagattcta
gagcttaagtgtaatcttgaaaataaaaaagaggaggtttccaggctggaagaacagatg
aatggcttgaaaacatcaaatgagcatctccaaaagcatgtggaagatctgttgaccaaa
tcgaaagaggccaaggaacaacaggccagcatggaagagaaattccacaatgaattaaat
gctcacataaaactctctaacctatacaagagtgctgctgatgactcagaagcaaagagc
aatgaactaacccgtgcggtagatgaactgcacaaacttttgaaagaagcgggagaagcc
aacaaagcaatacaagatcatcttctagaggtggaggaatctaaagatcaaatggaaaaa
gaactgcttgagaaaatagggaaattggagaaggaactggaaaatgcaaatgacctcctg
tctgccacaaaacgtaaaggagctatactgtctgaagaagagcttgcagccatgtctcct
actgcagcagccgtagctaagatagtgaaacctggcatgaaattaactgagctgtataat
gcttacgtggaagctcaagatcagttgcttttggagaaactagaaaacaaaagaattaat
aagtatctagatgaaatagtgaaggaagttgaagctaaagcaccaattttgaaacgccag
cgtgaggagtatgaacgtgcacagaaggctgtggcaagtttatctgttaagcttgaacaa
gctatgaaggagattcaacgattgcaggaggatactgataaggccaataaacattcatct
gtacttgaaagagacaatcaaagaatggaaatacaagtaaaagatctttcacagcagatt
agagtgcttctgatggaacttgaagaagcaaggggcaaccatgtgatccgtgatgaggaa
gtgagttctgctgacataagcagttcatcagaagtgatatcacagcacctggtgtcctac
agaaacattgaagagctccagcagcaaaaccagcggctcttagtggctcttagggaactt
ggggaaaccagagaaagagaagaacaagaaactacgtcatccaagatcactgagcttcag
ctcagacttgagagctccctcacggagctggagcagctccgcgagtcgcgacagcatcag
atgcagctggtcgattccatagttcgtcagcgagacatgtaccgtattttattgtcgcag
acaacaggagttgtcattcctttacaagcttccagtttggaagatatttctctcatgtcc
actccgaaacggtcaagcacctcacagactgtttctactcctgctcctgggcctgttatt
gaatcaacagaggctatagaagccaaggctgctctcaaacagttgcaggaaatttttgag
aactacaaaaaagaaaaagcagataatgagaaagtacaaaatgaacaacttgagaaactt
caagaacaagttacagatttgcgatcacaaaacaccaaaatttctacccagctagatttt
gcttctaaacgttatgaaatgctacaagataatgttgaaggatatcgtcgagaaataaca
tccctccatgagagaaatcaaaaactcactgcaacaactcaaaagcaggagcagatcatc
aatacgatgactcaagacttgagaggagcaaatgaaaagctcgctgttgcagaagtaaga
gcagaaaatttgaagaaggaaaaggaaatgcttaaattatcagaagttcgtctttcccag
caaagagagtctctgttagctgaacaaagagggcaaaacctgctgctaactaatctgcag
acaattcagggaatactagagcgatctgaaacagaaaccaaacaaagacttagtaaccag
attgaaaaactcgaacatgagatctctcatctaaagaagaagttagaaaatgaggtggaa
caaaggcatacactcactaggaatctagatgttcaacttttagatacaaagagacagttg
gatactgagataaatcttcacctgaacacaaaagagctattaaaaaatgctcagaaggaa
attgctacattgaaacagcacctcagtaacgtggaagtccagcttgcttctcagtcctca
cagagaactggtcagtctagtgacaaagaagatgtagacgatcttctaagtcagcttagg
caggcagaagagcaattgaatgacttgaaggagagactcaaaacaagtgcaagtaatgtg
gaacagtatcgagcaatggttacaagtttagaagaatccctgaacaaggaaaagcaggtg
acagaagaagtacgtaagaacattgaagttcgtttaaaagaatcagctgagtttcagaca
cagttggaaaagaagttgatggaagtagaaaaggaaaaacaagaacttcaggatgacaag
agaaaagctatagaaagcatggaacaacagttatctgagttgaagaaaacactttctagt
gtgcagaatgaagtgcaggaagctcttcagagagccagcacagctttaagtaatgaacag
caggccagacgtgactgccaggagcaggccaagatggctgtggaggcccagaacaagtac
gagagagagctcatgctgcatgccgcggatgtggaggctctgcaggctgccaaggagcaa
gtttcaaaaatggcctcagcccgtcagcatctggaagaaacaacccagaaagcggaatca
cagttgctggagtgtaaagcatcttgggaggagagagagagaatgttaaaggatgaagtt
tctaagtgcatgtctcgctgtgaggatctggagaaacaaaatagattacttcatgatcag
attgaaaatttaagtgacaaggttgttgcctcgatgaaggagggtgcacagggtccattg
aatgtctctctcagtgaagaaggaaaatcacaagagcagattctagaaatcctcagattt
atacgaagagaaaaagaaattgctgaaactagatttgaagtggctcaggtggaaagtcta
cgttatcgacaaagggttgaactgttagaaagagagctgcaggaactgcaagacagtcta
aatgctgagagggagaaagtccaggtgactgcaaaaacgatggctcagcatgaagaactg
atgaagaaaactgaaacgatgaatgtagttatggagaccaataagatgctacgagaagaa
aaggagaggctagaacaggatctgcagcaaatgcaagcaaaggtgaggaaacttgagcta
gatattttacccttacaagaagcaaatgccgagctcagtgagaagagtggtatgttgcag
gcagagaagaagttgttggaagaggacgtcaaacgttggaaagcacgtaaccagcatcta
gtaagtcaacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaa
gttcatactaagcgtattcaacagttgactgaagaagttgggagactgaaagctgaaatt
gcaagatcgaatgcatccttaactaacaaccagaatttaatccagagtctgaaggaggat
ttaaataaaataagaactgaaaaggaaactattcagaaggatttagatgccaaaataatt
gatatccaagaaaaagttaaaactattactcaagtgaagaaaattggacgcagatataag
actcagtacgaagaactgaaagcacagcaggataaggtcatggagacttcagctcagtct
tctggagaccatcaggaacagcatgtctcaatgcaggaaatgcaggagctcaaggaaacc
ctcaaccaagctgaaacaaagtcaaaatcacttgagaatcaagtagagaatctgcagaag
acattatcagaaaaagagacagaggcaagaaatcttcaggagcagactgttcagcttcag
tctgaactgtcccgactccgtcaggatcttcaggacagaaccacacaggaagagcagctc
cgacagcagataactgaaaaggaagaaaaaacaagaaaggctattgtagcagcaaaatca
aaaattgcacacttagctggtgtgaaagatcagttaactaaagaaaatgaggaacttaaa
caaaggaatggagccttagatcagcagaaagatgaattggacgttcgcatgactgccctt
aagtcccagtatgaaggtcgaattagtcgcctggaaagagaactcagggagcatcaggag
agacaccttgagcagcgggatgagcctcaggaacccactaataaggtcccagaacaacag
aggcagatcacattgaaaacgactccagcttctggcgaaagaggaattgccagcacgtca
gacccaccaacagccaatattaagccaactcctgttgtgtctactccaagtaaagtgaca
gctgcagctatggctgggaataagtcaacacccagggctagcatccgtccaatggtcaca
cctgcgaccgtcacaaaccctactaccaccccaacagctacagtgatgcccaccacacag
gtggaatcacaagaagctatgcagtcagaggggcctgttgaacatgttccagtatttggc
agcacaagtggatctgttcgttccacaagccctaatgtccagccttccatctctcagccc
attttaactgttcagcaacagacacaggctacagccttcgtacaacccactcaacagagt
catcctcaaattgaacctgcaaatcaggagctgtctcccaacatagtagaggttgttcag
agttcaccagttgagcggccttctacttccacagcagtgtttggcactgtttcggccact
ccaagttcttctttgccaaagcgcacacgtgaagaagaagaggataatgccatagaagca
ccagaccaagtctctgatgatacagtagaaatgcctcttccgaagaagctgaaaagcgtg
acacctgtgggaactgaggaagaagctatggcagaagaaagtactgatggggaggtagag
ccacaagtgtataaccaggattctcaagattccattggagaaggagtcacccagggagat
tatacacccatggaagacagcgaagaaacctctcaatctctccaaatagatctgggccca
cttcagacagatcagcagacaactacttcatcccaggatggtcaaggcaaaggagatgat
gtcattgtaattgatagtgatgatgaagaggaggaggaggatgaaaatgatggagaacat
gaggactatgaagaggatgaggaagatgatgatgatgatgaagatgacacagggatggga
gacgagggtgaagatagtaatgaaggaactggtagtgcagacggtaatgacggctatgaa
gctgatgatgccgagggtggtgaggggactgatccgggtacagaaacagaagaaagtatg
ggtggaggtgagagtaatcagagagctgctgattctcaaaacagcggtgatgggaataca
ggtccggcagagtccttttcccaggagatttctagagaacagcagccgtcatccgcatct
gaaagacaagcccctcgagcaccccagtccccacgacgcccaccacaccccctcccccct
cgactgaccattcatgctcccccacaggagctgggaccaccagtccagagaattcagatg
acacggaggcagtctgtagggcgtgggcttcagttgactccaggaataggtggcatgcag
cagcatttttttgacgacgaagacagaactgttccaagtactccaactcttgtggtgcca
catcgcactgatggatttgctgaagcgattcattccccacaggttgctggtgttcctaga
ttccggtttgggccacctgaagatatgccacaaacaagttctagtcactccgatcttggc
cagctcgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctggctcacgaa
gaagagtcagggggccgaagtgttcccacgactcctctgcaagtagcagccccagtgact
gtgtttactgagagtaccacctctgatgcctcggaacatgcttcccagtctgtcccaatg
gtgacaacatccactggtgctttatccaccacaaatgaaactgctgcagctgatgatgga
gatgaagtatttgtggaggcagaatcggaaggtattagctcagaagccggcctagaaatc
gatagccagcaagaagaggaacccgttcaggcatctgatgagtcagatctcccgtccacc
agccaggaccctccttccagttcttccgtagataccagcagtagtcaaccaaagcctttc
agacgagtcagacttcagacaacgttgagacaaggtgtccgtggtcgtcagtttaacaga
cagagaggtgtgagccatgcaatgggaggaagaggaggaataaatagaggaaatattaat
taa

KEGG   Oryctolagus cuniculus (rabbit): 100349893
Entry
100349893         CDS       T03373                                 
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
  KO
K09290  tropomyosin 3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04260  Cardiac muscle contraction
ocu04261  Adrenergic signaling in cardiomyocytes
ocu04814  Motor proteins
ocu04820  Cytoskeleton in muscle cells
ocu05200  Pathways in cancer
ocu05216  Thyroid cancer
ocu05410  Hypertrophic cardiomyopathy
ocu05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    100349893
   04820 Cytoskeleton in muscle cells
    100349893
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100349893
  09162 Cancer: specific types
   05216 Thyroid cancer
    100349893
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    100349893
   05414 Dilated cardiomyopathy
    100349893
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100349893
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     100349893
SSDB
Motif
Pfam: Tropomyosin Laminin_II TMF_DNA_bd TMP_N CLZ HR1 CENP-F_leu_zip PUMA_CC DUF745 WS_DGAT_cat MAD BORCS7 LptF_LptG
Other DBs
NCBI-GeneID: 100349893
NCBI-ProteinID: XP_002708655
LinkDB
Position
1:complement(130097094..130099203)
AA seq 248 aa
MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
EADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQ
KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
TLLDLNEM
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccgggatcaccaccatcgaggcggtgaagcgcaagatccaggttctgcagcagcag
gcggatgatgcagaggagagggcggagcgccttcagcgggaggtggagggggaaaggcgg
gcccgagagcaggctgaggctgaggtggcttccttgaaccgcaggatccagttggtggaa
gaggagctggatcgtgctcaggagcgcctggccactgccctgcaaaagttggaagaagca
gaaaaagctgctgatgagagtgagagaggtatgaaggttattgaaaaccgggccttaaaa
gatgaagaaaagatggaactccaggaaatccaactcaaagaagctaagcacattgcagaa
gaggcagacaggaagtatgaagaggtggctcgtaaattggtgattattgaaggagacttg
gaacgcacagaggaacgagctgagctggcagagtcccgttgccgagagatggatgagcag
atcagactgatggaccagaacctgaagtgtctgagtgctgctgaggaaaagtactctcaa
aaagaggacaaatatgaggaagaaataaagattctcaccgataaactcaaggaggcggag
acccgtgctgaatttgctgagagatcggtagccaagctggaaaagacaattgatgatttg
gaagataaactgaaatgcaccaaagaggagcacctctgtacacaaaggatgctggaccag
actctgcttgacctgaacgagatgtag

KEGG   Oryctolagus cuniculus (rabbit): 100351420
Entry
100351420         CDS       T03373                                 
Name
(RefSeq) LOW QUALITY PROTEIN: tropomyosin alpha-3 chain
  KO
K09290  tropomyosin 3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04260  Cardiac muscle contraction
ocu04261  Adrenergic signaling in cardiomyocytes
ocu04814  Motor proteins
ocu04820  Cytoskeleton in muscle cells
ocu05200  Pathways in cancer
ocu05216  Thyroid cancer
ocu05410  Hypertrophic cardiomyopathy
ocu05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    100351420
   04820 Cytoskeleton in muscle cells
    100351420
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100351420
  09162 Cancer: specific types
   05216 Thyroid cancer
    100351420
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    100351420
   05414 Dilated cardiomyopathy
    100351420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100351420
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     100351420
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ Crescentin TMF_DNA_bd PUMA_CC DUF745 DUF3450 XhlA Lebercilin CENP-F_leu_zip ATG16 SlyX Laminin_I DUF1664
Other DBs
NCBI-GeneID: 100351420
NCBI-ProteinID: XP_051713218
LinkDB
Position
13:38652092..38679988
AA seq 284 aa
MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKY
SEALKDAQEKLELAEKKAADAEGEVASLNRRXQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccataaagaaaaagatgcagatgctcaagctggacaaggagaatgctctggac
cgtgctgagcaagctgaagcggagcagaagcaggcagaagaaagaagtaaacagctggaa
gatgagctggcggccatgcagaagaagctgaaagggacagaggatgagctggacaagtat
tctgaagccctgaaggatgcccaggagaaactggagctggcagagaagaaggcagctgac
gctgagggtgaggtggcttccttgaaccgcagantccagttggtggaagaggagctggat
cgtgctcaggagcgcttggccactgccctgcaaaagttggaagaagcagaaaaagctgct
gatgagagtgagagaggtatgaaggttattgaaaaccgggccttaaaagatgaagaaaag
atggaactccaggaaatccaactcaaagaagctaagcacattgcagaagaggcagacagg
aagtatgaagaggtggctcgtaaattggtgattattgaaggagacttggaacgcacagag
gaacgagctgagctggcagagtctaagtgttctgagctggaggaggagctgaagaatgtc
accaacaacctcaagtctcttgaggctcaggcggagaagtactctcaaaaagaggacaaa
tatgaggaagaaataaagattctcaccgataaactcaaggaggcggagacccgtgctgaa
tttgctgagagatcggtagccaagctggaaaagacaattgatgatttggaagatgagctc
tatgcccagaaactgaagtacaaggccattagcgaggagctggaccacgccctcaatgac
atgacctctatataa

KEGG   Oryctolagus cuniculus (rabbit): 100354292
Entry
100354292         CDS       T03373                                 
Name
(RefSeq) high affinity nerve growth factor receptor
  KO
K03176  neurotrophic tyrosine kinase receptor type 1 [EC:2.7.10.1]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04010  MAPK signaling pathway
ocu04014  Ras signaling pathway
ocu04020  Calcium signaling pathway
ocu04151  PI3K-Akt signaling pathway
ocu04210  Apoptosis
ocu04722  Neurotrophin signaling pathway
ocu04750  Inflammatory mediator regulation of TRP channels
ocu05200  Pathways in cancer
ocu05202  Transcriptional misregulation in cancer
ocu05216  Thyroid cancer
ocu05230  Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    100354292
   04151 PI3K-Akt signaling pathway
    100354292
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100354292
  09157 Sensory system
   04750 Inflammatory mediator regulation of TRP channels
    100354292
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100354292
   05202 Transcriptional misregulation in cancer
    100354292
   05230 Central carbon metabolism in cancer
    100354292
  09162 Cancer: specific types
   05216 Thyroid cancer
    100354292
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ocu01001]
    100354292
Enzymes [BR:ocu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     100354292
Protein kinases [BR:ocu01001]
 Receptor tyrosine kinases (RTK)
  TRK family [OT]
   100354292
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase LRRCT_2 I-set LRR_8 Ig_3 TrkA_TMD ig LRR_NXF1-5 HTH_32
Other DBs
NCBI-GeneID: 100354292
NCBI-ProteinID: XP_008262512
Ensembl: ENSOCUG00000010696
LinkDB
Position
13:complement(36381568..36400023)
AA seq 797 aa
MLRGGRRWQLGWHSQATGPGTLLAWLMLASAGAALCPDVCCPRGPSGLLCTRPGALDRLR
HLPGIENLTELYLENQNLQHLTLGDLRGLRELRNLAIVNSGLQSVATDAFRFTPRLSHLN
LSFNALESLSWKTVQGLPLQELVLSGNSLRCSCALRWLQRWEEEGLAGVREQKLRCSESE
PLALMPNASCGMPTLKVQMPNGSVDVGDSVFLQCQVEGQGLEKAGWSLTELEELATVMIQ
KSEDLPTLRLTLANVTSDLNRKNVTCWAENDVGRTEVSVQVNVSFPASVQLHTAVEMHHW
CIPFSVDGQPAPSLHWLFNGSVLNETSFIFTEFLEPAANETMRHGCLRLNQPTHVNNGNY
TLLATNPSGQAAASIMAAFMDNPFEFNPEDPIPVSFSPVDANSTSGDPVEKKDETPFGVS
VAVGLAVFACLFLSTLLLVLNKCGRRNKFGINRPAVLAPEDGLAMSLHFMTLGGSSLSPT
DGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHHLLPEQDKT
LVAVKALKEASESARQDFQREAELLTMLRHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR
FLRSHGPDAKLLAGGEDVAPGPLRLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG
QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFSTESDVWSFGVVLWE
IFTYGKQPWYQLSNTEVIECITKGRELERPRACPPEVYAIMQGCWQWDPQQRHSIKDVHA
RLQALAQAPPVYLDVLG
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgctgcgaggcggacggcgctggcagcttggctggcacagccaggcgacggggccgggc
accttgctggcgtggctaatgctggcatccgcgggtgccgcgctctgccccgatgtctgt
tgcccccgcggcccctcggggctgctctgcacccgtcctggagccctggacaggctccgc
cacctgccgggcatcgagaacctgacagagctctacctggagaaccagaacctgcagcat
ctcacgctcggtgacctgaggggcctgcgggagctgagaaacctcgccatcgtgaacagc
ggcctccaatccgtggcgacagatgccttccgcttcactccccggctgagtcacctgaat
ctctccttcaatgctctggagtctctctcctggaaaaccgtgcagggcctccctttacag
gaactggtcctgtcggggaactctctgcgctgctcctgtgccctgcgctggctgcagcgc
tgggaggaggaggggctggccggcgtgcgggaacagaagctgcggtgctccgagtcagag
ccccttgccctcatgcccaacgccagctgcggtatgcccacgctgaaggtccagatgccc
aatggctcggtggatgtaggggacagtgtgttcctgcagtgccaggtggaggggcagggc
ctggagaaagctggctggagcctcacggagctggaggagctggccacagtgatgatccag
aaatctgaggatctgcccaccctgaggctgactctggccaatgtcaccagtgaccttaac
aggaagaacgtgacctgctgggcggagaatgatgtgggccggaccgaggtctccgttcag
gtcaacgtctccttcccggccagcgtgcagctgcacacggcggtggagatgcaccactgg
tgcatccccttctccgtggatggccagccagctccctccctgcactggctcttcaatggc
tccgtgctcaacgagaccagcttcatcttcaccgagttcctggagccagcggccaatgag
accatgcggcacggctgcctgcgcctcaaccagcccacccacgtcaacaacggcaactac
acgctgctggccaccaacccctcgggccaggctgctgcctccatcatggctgccttcatg
gacaaccctttcgagttcaaccctgaggaccccatccctgtttccttctcgccagtggat
gccaacagcacctctggagacccggtggagaaaaaggacgaaacgccttttggggtctcg
gtggctgtgggcctggctgtctttgcctgccttttcctttccacactgcttctcgtcctc
aacaaatgtggacggaggaacaagtttgggatcaaccggcctgcggtgctggctccagaa
gatggactggccatgtccctgcatttcatgacattgggtggcagctctctgtcccctact
gatggcaaaggctccgggctccaaggccacatcattgagaacccacagtacttcagcgat
gcctgtgtccatcatattaaacgccgggacatcgtgctcaagtgggagctgggcgagggc
gcctttgggaaggtcttcctggccgagtgccaccacctgctgcccgagcaggacaagacg
ctggtggcggtcaaggcgctgaaggaggcgtctgagagcgcgcggcaggacttccagcgc
gaggccgagctgctcaccatgctgcggcaccagcacatcgtgcgcttcttcggcgtgtgc
accgagggccgcccgctgctcatggtctttgagtacatgcggcacggagacctcaaccgc
ttcctccgctcccatgggcctgacgccaagctgctggctggcggggaggacgtggcccca
ggtcccctgcgcctgggccagctgctggccgtggccagccaggtggccgcggggatggtg
tacttggcgggtctgcacttcgtgcaccgggacctggccactcgcaactgcctggtgggt
caggggctcgtggtcaagattggtgatttcggcatgagcagagatatctatagcaccgac
tactaccgcgtgggaggccgcaccatgctgcccatccgctggatgccgcccgagagcatc
ctctaccgcaagttcagcacggagagcgacgtgtggagcttcggcgtggtgctctgggag
atcttcacctatggcaagcagccctggtaccagctctccaacaccgaggtgatcgagtgc
atcacgaagggacgtgagctggagcggccgcgtgcctgcccgccggaggtctacgccatc
atgcagggctgctggcagtgggatccccagcagcgccacagcatcaaagatgtgcacgcc
cgactgcaagccctggcccaggcgccacccgtctacctggacgtcctgggctag

KEGG   Oryctolagus cuniculus (rabbit): 100359064
Entry
100359064         CDS       T03373                                 
Name
(RefSeq) protein TFG isoform X1
  KO
K09292  protein TFG
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu05200  Pathways in cancer
ocu05216  Thyroid cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100359064
  09162 Cancer: specific types
   05216 Thyroid cancer
    100359064
SSDB
Motif
Pfam: PB1
Other DBs
NCBI-GeneID: 100359064
NCBI-ProteinID: XP_008265257
Ensembl: ENSOCUG00000005327
UniProt: U3KLW8
LinkDB
Position
14:complement(120922348..120963749)
AA seq 401 aa
MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD
EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL
DSLEPPGEPGPPTSIPDNDTVDGREEKPTASDSSGKQSTQVMAASMSAFDPLKNQDEINK
NVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI
EGQLYQQYQQQAGYGAQQPQAPPQPPQQYGVQYSASYSQQTGPQQPQQFQGYGQQPTSQA
PAPAFSGQPQQLPAQPPQQYQASSYPPQTYTTPTSQPTNYTVAPACQPGMAPSQPGAYQP
RPGFTSPPGGTVAPPTSGPNPYVRSRPPFGQSYVQPGPGYR
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgaatggacagttggacctaagcggaaagctaatcatcaaagctcaacttggggaggat
attcgacgaattcccattcataatgaagatattacttatgatgaattagtgctaatgatg
caacgagttttccgaggaaaacttctgagtaatgatgaagttacaataaagtataaagat
gaagatggagatcttataacaatttttgatagttctgacctttcctttgcaattcagtgt
agtaggatactgaaactgacattgtttgttaatggtcaacccagaccccttgaatcaagt
caggtgaaatacctccgtcgagaactgatagagcttcgcaataaagtgaatcgcttattg
gacagcttggagccacctggagagccaggacctcccaccagtattcctgacaatgatact
gtggatggtagggaagaaaaacctactgcttctgattcttctggaaaacagtctactcag
gttatggcagcaagtatgtcagcttttgaccctttgaaaaaccaagatgaaatcaataaa
aatgttatgtcagcatttggcttaacagatgatcaggtttcagggccaccaagtgctcct
gcagaagatcgatcaggcactcctgacagcattgcttcctcctcctcagcagctcaccca
ccaggagtccagccgcagcagccaccgtacacaggagctcagacacaagcaggtcagatt
gaaggccagctgtaccaacagtaccagcaacaggctggttatggtgcgcagcagccgcag
gccccacctcagccacctcagcagtatggtgtgcagtattcagccagttatagtcaacag
actggaccccagcagcctcagcagttccagggatatggccaacaaccaacttctcaggcg
ccagctcctgccttttctggtcagcctcaacaactgcctgctcaaccgccacagcagtac
caggcgagcagttatcctccacaaacgtacactaccccaacgtctcagcctaccaattac
actgtggctcctgcctgtcaacctggaatggctccaagccaacctggggcctatcaacca
agaccaggctttacttcaccccctggaggtaccgttgcccctcctacaagtgggcccaac
ccttatgtacgttctcgtcctccctttggtcagagctatgtccagcctggacctggttat
cgataa

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