Oryctolagus cuniculus (rabbit): 100346748
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Entry
100346748 CDS
T03373
Name
(RefSeq) estrogen receptor beta
KO
K08551
estrogen receptor beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu01522
Endocrine resistance
ocu04081
Hormone signaling
ocu04915
Estrogen signaling pathway
ocu04917
Prolactin signaling pathway
ocu04929
GnRH secretion
ocu05200
Pathways in cancer
ocu05207
Chemical carcinogenesis - receptor activation
ocu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
100346748
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100346748
04915 Estrogen signaling pathway
100346748
04917 Prolactin signaling pathway
100346748
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100346748
05207 Chemical carcinogenesis - receptor activation
100346748
09162 Cancer: specific types
05224 Breast cancer
100346748
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100346748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100346748
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocu03310
]
100346748
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
100346748
Nuclear receptors [BR:
ocu03310
]
3. Estrogen like
3A. Estrogen receptor
100346748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
SCFA_trans
Motif
Other DBs
NCBI-GeneID:
100346748
NCBI-ProteinID:
XP_017204881
Ensembl:
ENSOCUG00000005083
LinkDB
All DBs
Position
20:complement(11606394..11663718)
Genome browser
AA seq
542 aa
AA seq
DB search
MSLRASCCKEFTQLLPSQDMDIKNSPSSLHSPASYNCSQSVLPLEHGPLYVPASYVENHH
EYPAMTFYSPAMMNYSVPSGASEADRGPGRQPTSPDVLWPTPGHLSPLAIRCQSSLLYPE
PQKPSWCEVRPLEHTSPVNREALKRKVSGDSCASPVTSSKKDARFCAVCSDYASGYHYGV
WSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRER
CGYRIVRRRRSSGELHCPSRARKNGGPVTRVKDVLLSALSPEQLVLTLLEAEPPHVLVSR
PSSPFTETSMMLSLTKLADKELVHMIGWAKKIPGFVELSLLDQVRLLESCWMEVLMVGLI
WRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMV
LLNSSMCPLAAAAQEAESSRKLTHLLNAVTDALVWVIAKSGISAQQQSVRLANLLMLLSH
VRHASDKGMEHLLSMKCRNVVPVYDLLLEMLNAHTLRGHRPAATAPGPAEDRKGAEGPQN
PQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccgtgcctcgtgttgcaaggagtttacacagctgctacctagtcaagacatg
gatatcaaaaactcaccatccagccttcactctcctgcctcctacaactgcagtcagtct
gtcttacccctggagcacggccccctctacgtccctgcctcctacgtagagaaccaccac
gagtaccccgccatgaccttctacagccctgccatgatgaattacagcgtccccagcggc
gccagtgaggcggaccgtgggccggggcgacagcccacaagtccagatgtgctgtggccg
actcctggccacctgtctcctttagccatccgttgtcagtcgtcacttctgtacccagaa
cctcagaagccttcgtggtgtgaagtgcgaccgctggagcacacctcgcctgtgaacaga
gaggccctgaagaggaaggttagtggagacagttgcgccagccccgtgacaagttcgaag
aaggatgcccgcttctgtgccgtctgcagcgactatgcgtcgggatatcactacggagtc
tggtcgtgtgaagggtgtaaggccttctttaaaaggagcattcaaggacataatgattac
atttgtccagctacaaatcagtgcaccatagataagaaccggcgcaaaagctgccaggcc
tgccgacttcggaagtgctatgaagtggggatggtgaagtgtggctcccggagagaaagg
tgtgggtaccgcatagtgcggagacggagaagttccggcgagctgcactgcccgagcaga
gccaggaagaacggaggccctgtgacgcgcgtcaaggacgtgctgctgagcgccctgagc
ccggaacagctggtgctcaccctgctggaggcagagccgccccacgtgctggtgagccgc
cccagctcgcccttcaccgagacctccatgatgctgtccctcaccaagctggccgacaag
gaattggtgcacatgatcggctgggccaagaaaatccccggctttgtggagctcagcctg
ttggaccaagtgcgcctcttggagagctgctggatggaggtgttaatggtggggctcata
tggcgctcgatcgaccaccccggcaagctcatctttgccccagacctcgtgctggacagg
gatgaggggaaatgcgtagaaggaattctggaaatctttgacatgctcttggcgacaact
tcgaggttccgtgagctaaagctgcaacacaaggagtacctctgcgtgaaggccatggtc
ctgctcaactccagtatgtgccctctggctgcggccgcccaggaggctgagagcagccgg
aaactgactcacctgctgaacgccgtgaccgacgctttggtctgggtgatcgccaagagc
ggcatctcggcccagcagcagtcggtccgcctggccaacctcctgatgctcctctcccac
gtcaggcatgccagtgacaagggcatggaacacctgctcagcatgaagtgcagaaacgtg
gtcccggtgtacgacctgctgctggagatgctgaacgcccacacgctgcgtgggcacagg
cccgcggccacggcgcccggcccggccgaggacaggaagggcgcagaggggccccagaac
ccgcagtga
Oryctolagus cuniculus (rabbit): 100351261
Help
Entry
100351261 CDS
T03373
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu01522
Endocrine resistance
ocu04081
Hormone signaling
ocu04915
Estrogen signaling pathway
ocu04917
Prolactin signaling pathway
ocu04919
Thyroid hormone signaling pathway
ocu04961
Endocrine and other factor-regulated calcium reabsorption
ocu05200
Pathways in cancer
ocu05205
Proteoglycans in cancer
ocu05207
Chemical carcinogenesis - receptor activation
ocu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
100351261
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
100351261
04917 Prolactin signaling pathway
100351261
04919 Thyroid hormone signaling pathway
100351261
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100351261
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100351261
05205 Proteoglycans in cancer
100351261
05207 Chemical carcinogenesis - receptor activation
100351261
09162 Cancer: specific types
05224 Breast cancer
100351261
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100351261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100351261
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocu03310
]
100351261
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
100351261
Nuclear receptors [BR:
ocu03310
]
3. Estrogen like
3A. Estrogen receptor
100351261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ESR1_C
Motif
Other DBs
NCBI-GeneID:
100351261
NCBI-ProteinID:
XP_008261916
Ensembl:
ENSOCUG00000004829
LinkDB
All DBs
Position
12:complement(13792600..14263325)
Genome browser
AA seq
600 aa
AA seq
DB search
MTMTLHTKASGMALLHQIQGNELEPLNRPQLKMPLERPLSEVYVDSSKPAVYNYPEGAAY
EFNAAAAAAAAATAPVYSQSGLAYGPGSEAAFGSNGLGGFPQLNSVSPSPLMLLHPPPQL
SPFLHPHSQQVPYYLENEPSGFGVREPGPPAFYRPSSDNRRQGGRERLASTGDKGGMAVE
SAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGNRHNDYMCPATNQCTIDKNRRK
SCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRNETGPPGDMRAANLWPSP
LLIKHTKKNSPALSLTADQMVSALLEAEPPIIYSEYDPTRPFSEASMMGLLTNLADRELV
HMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQG
KCVEGMVEIFDMLLATSSRLRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHI
HRVLDKITDTLIHLMAKAGLTLQQQHRRLAQLLLILSHIRHMSNKGMEHLYNMKCKNVVP
LYDLLLEMLDAHRLHAPANRGGVPMEEPAQGQLTTTSAASAHSLQTYYIPGEAEDFPSTI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaccctccacaccaaagcatccggcatggccctgctccaccagatccaaggg
aatgagctggagcccctgaaccgcccgcagctcaagatgcccctggagcggcccctgagc
gaagtgtacgtggacagcagcaagccggctgtgtacaactaccccgagggtgccgcgtat
gagttcaacgccgcagcggccgccgctgccgccgccaccgcgccggtctacagccagtcc
ggcctcgcctacggcccgggctcggaggcggcattcggctccaacggcctggggggcttc
ccccagctcaacagcgtgtctccgagcccgctgatgctgctgcaccctccgccacagctc
tcgcccttcctgcacccccacagccagcaggtgccctattacctggaaaacgagccaagc
ggcttcggcgtgcgcgagcccggccctccagcgttctacaggccaagttcagataaccga
cgccaaggtggccgggagagattggccagcactggtgacaaaggaggcatggccgtggaa
tctgccaaggagacgcgctactgtgcagtgtgcaatgattatgcctcaggctaccattac
ggagtctggtcctgtgagggttgtaaggccttcttcaagagaagtattcaaggtaatagg
cataatgactacatgtgtccagctaccaaccagtgcacaattgacaaaaacaggaggaag
agctgccaggcctgcaggcttcgaaaatgctacgaagtgggaatgatgaaaggtggtata
cggaaagaccgaagaggagggagaatgttgaaacacaagcgccagagagatgatggggaa
ggcaggaatgaaacagggccccctggagacatgagggctgccaacctctggccaagccct
ctgttgatcaagcacactaagaagaatagcccagccttgtctctgacggccgatcagatg
gtcagtgccttgttggaagctgagccccccatcatctattctgagtacgaccctaccaga
cccttcagtgaggcctcgatgatgggcctactgaccaacttggcagacagagagctagtt
cacatgatcaactgggcaaagagggttccaggctttgtggatttgacccttcatgatcag
gtccaccttctggaatgtgcctggctagagatcctgatgatcggtcttgtctggcggtcc
atggagcacccagggaagcttctatttgctcctaacttactcctggacaggaaccagggg
aaatgtgtagagggcatggtggaaatctttgacatgttgctggctacatcgtctcggtta
cgtatgatgaatttgcagggagaggaatttgtgtgcctcaaatctatcattttacttaat
tctggagtgtacacatttctgtccagcaccctcaaatctctggaagagaaggaccatatc
catcgtgtcctggacaagatcacagacaccttgatccacctgatggccaaggcgggtctg
actctgcaacagcaacaccggcgcctggcccagctcctcctcatcctctcccacatccgc
cacatgagtaacaaaggcatggaacatctgtacaatatgaagtgcaagaacgtggtgccc
ctgtatgacctgttgctggagatgctggatgcccaccgcctgcatgctccagccaaccgt
gggggtgtgcccatggaggagcccgcccagggccagctgactaccaccagcgctgcttca
gcacattccttgcaaacctattatatccctggagaggctgaggatttccccagcacaatc
taa
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integrated database retrieval system