Oryctolagus cuniculus (rabbit): 100348211
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Entry
100348211 CDS
T03373
Symbol
SLIT2
Name
(RefSeq) slit guidance ligand 2
KO
K06839
slit 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100348211 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocu00536
]
100348211 (SLIT2)
Glycosaminoglycan binding proteins [BR:
ocu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100348211 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
hEGF
EGF_3
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
100348211
NCBI-ProteinID:
XP_002709418
Ensembl:
ENSOCUG00000009517
LinkDB
All DBs
Position
2:10849860..11247761
Genome browser
AA seq
1525 aa
AA seq
DB search
MRGVGWQTLPLSLGLVLAILSEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNKNHLQLFPE
LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNAIKVIPPGAFSPYKKFRRNVEGHDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF
SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNE
FTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKG
LESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLAN
PFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPL
SRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLLPKELSNYKHLTLIDL
SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA
FNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKK
FTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISN
PCKHGGTCHLKEGEKDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLC
PPEFTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYIGEHCDIDFDDCQDNK
CKNGAHCTDAVNGYTCTCPDGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRMNEPI
CQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKD
HIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKVI
TNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDFRKVP
MQTGILPGCEPCHKKVCAHGTCRPSSQSGFSCECEEGWTGPLCDQRTNDPCVGNKCVHGT
CLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECSSGYVG
DSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCAGGQCCAPLRSKRRKYSF
ECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgttggctggcagacactgcccctgtcgctggggttggtgctggcgatcctg
agtgaggtggcgccgcaggcgtgcccggcgcagtgctcctgctccggcagcacggtggac
tgtcacgggctggcgctgcgcagcgtgcccaggaacattccccgcaacaccgagagactg
gatttgaatggaaataacatcacgcggattacgaagacagattttgctggccttagacat
ctgagagttcttcagcttatggagaataagattagcaccattgaaagaggagcattccag
gatctgaaagaactggaaagactgcgtttaaacaaaaatcaccttcagctgtttcctgag
ttgctgtttcttgggactgcgaagttatacaggctcgatctcagtgaaaatcaaatccag
gcaattccaaggaaggctttccgtggagcagttgacattaagaatttgcagctggattac
aaccagatcagctgtattgaagatggggcatttagggctctccgggacctggaagtgctc
actctcaacaataataacattactagactttctgtggcaagtttcaaccatatgcccaaa
cttaggacttttcgactccattcgaacaacctgtattgtgactgccacctggcctggctt
tccgactggcttcgccaaagacctcgcgtgggcttgtacactcagtgtatgggcccttcc
cacctgaggggccataacgtagctgaggttcaaaaacgagaatttgtctgcagtggccac
cagtcattcatggctccttcttgtagtgttttacactgccctactgcctgcacctgtagc
aacaatattgtagactgtcgtgggaaaggactcactgagatccccacaaacctgccggag
accatcacagaaatacgtttggaacagaatgcaatcaaggtcatccctcctggagctttc
tcaccatacaagaagtttagaagaaatgtggagggacacgacctgagcaataatcagatc
tctgaactcgcgccagatgctttccaaggactgcgctctctgaattcacttgtcctgtat
ggaaataaaattacggaactccctaaaagtttatttgaaggactcttttccttacagcta
ctattattgaatgccaacaagataaactgccttcgggtagatgcttttcaggatctccac
aacttgaaccttctctccttgtatgacaacaagcttcagaccatcgccaaggggacattt
tctcctctccgggccattcaaaccatgcatttggcccagaaccccttcatttgtgactgc
catctgaagtggctggcggattatctccataccaaccccattgagaccagtggtgcccgc
tgcaccagcccccgccgtctggcgaacaaaagaatcggacagatcaaaagcaagaaattc
cgttgttcaggtacagaagattaccgatcaaaattaagtggagactgctttgcagacttg
gcctgccctgaaaagtgccgctgtgaggggaccacagtagactgctccaatcaaaagctc
aacaaaatcccagaccacatcccccagtacactgcagagctgcgtctcaataataatgaa
ttcacagtgttggaagctacaggaatctttaagaaactgcctcaattacgaaaaatcaac
ttcagcaacaataagatcacagatatcgaggagggagcctttgaaggagcttctggtgta
aatgaaatacttctcacaagtaatcgtctggaaaacgtccagcataagatgttcaaggga
ttggaaagcctcaaaaccctgatgttgagaagtaatcgaataagctgtgttgggaatgac
agttttataggacttggttctgtgcgtttgctttctttatatgataatcaaattactact
attgcaccaggggcatttgatacccttcattctttatctactctaaacctcttggccaat
ccttttaactgtaactgccacctggcttggctgggagagtggctccggaaaaaacgaatt
gtcacaggaaatcctcggtgccaaaagccgtacttcctcaaagaaatccccatccaggac
gtggccattcaggacttcacttgtgatgatggaaacgatgacaatagttgctccccactt
tctcgctgtcctacggagtgtacttgtctggatacagtagtccgatgtagcaacaagggc
ctgaaagtcttgccgaaaggtattccaagggatgtcaccgagttatatctggatgggaac
caatttactctgcttcccaaggaactctccaactacaaacatttaacacttatagaccta
agtaacaacagaataagcaccctttcaaatcagagcttcagcaacatgacccagctcctg
actctaattcttagttataaccgtctgagatgtattcctcctcgaaccttcgatggattg
aagtctcttcgactgctttctctacacggaaatgacatttctgttgtgcctgaaggtgcc
ttcaatgatctttctgcactatcacacctagcgattggagccaatcctctttactgtgat
tgtaacatgcagtggttgtccgactgggtgaagtcggaatataaggaacccggaattgct
cgctgtgctggtcctggagaaatggcagataaactgttactcacaactccctccaaaaaa
tttacgtgtcaaggtcccgtcgatgtcaatattcttgctaaatgtaatccctgcttatcc
aatccgtgcaaaaatgatggcacctgtaacaatgatcctgttgacttttatcgatgcacc
tgtccatatggtttcaaggggcaagactgtgacattcctattcatgcttgcatcagtaac
ccgtgtaaacatggaggaacttgccacttaaaggaaggggaaaaagatgggttctggtgt
atttgtgcagatggatttgaaggggaaaattgtgaagtcaatgttgatgattgtgaagat
aatgactgtgaaaataattctacatgtgtcgatggaattaataactatacctgcctgtgc
ccacctgagttcacaggcgagctttgtgaagaaaagcttgacttctgtgcccaggacctg
aacccctgccagcatgactccaagtgtatcctgacaccaaaaggcttcaagtgtgactgc
actccaggatacataggtgagcactgtgacattgactttgacgactgccaggacaacaag
tgtaaaaacggcgcccactgcacggatgcagtgaatggttacacatgcacctgccctgac
ggttacagtggcttgttctgtgagttttctccacccatggtcctccctcgtaccagcccc
tgtgataattttgattgccagaatggagcacagtgcatcatcaggatgaatgagcccata
tgtcaatgtttgcctggttaccagggagagaaatgtgagaaattggtcagtgtgaatttt
gtgaacaaagagtcttatcttcagatcccttcagccaaggtgcggcctcagacaaacatc
acactgcagattgccacagatgaagacagtggcatcctcctgtacaaaggtgacaaagac
catatcgccgtggaactgtaccggggtcgtgtccgtgccagctacgacactggctctcac
ccggcttctgcaatttacagtgtggagacgatcaatgatgggaacttccacattgtggag
ctgcttgccctggatcagagtctctccctttctgtggatggcgggagccccaaagtcatc
accaacttgtcaaagcagtccactctgaattttgactccccactctatgtaggaggcatg
cccgggaagaataatgtggcatcactgcgccaggcccctggacagaatggcaccagcttc
catggctgcatccggaacctatacatcaacagtgagctgcaagacttccggaaggtgccc
atgcaaacaggcatcctgcctggctgtgagccatgccacaagaaggtgtgtgcccatggc
acgtgcaggcccagcagtcagtcaggcttctcctgcgagtgtgaggaaggatggacgggg
cccctctgtgaccagcggaccaatgacccttgtgttggaaataaatgtgtacacggcacc
tgcttgcccatcaatgcattttcctacagctgtaagtgcctggagggtcatggaggagtc
ctgtgtgatgaggaggaagatttgttcaacccctgccaggcaatcaagtgcaagcacggc
aagtgcaggctctctggactcgggcagccctactgtgagtgcagcagtggctacgtcggt
gacagctgtgatcgagaaatctcctgtcgaggggagcgaataagagattactaccagaag
cagcagggctatgccgcctgccagacaaccaagaaagtctcccgtttggaatgcaaaggc
ggctgcgctggaggccagtgctgcgcaccgctgcggagcaagcggcggaaatactctttc
gaatgcacagatgggtcctcgtttgtggacgaggttgagaaggtggtgaaatgcggctgc
acgaggtgtgcatcctaa
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integrated database retrieval system