Oryctolagus cuniculus (rabbit): 100348691
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Entry
100348691 CDS
T03373
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03410
Base excision repair
ocu05166
Human T-cell leukemia virus 1 infection
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100348691
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100348691
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100348691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100348691
Enzymes [BR:
ocu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100348691
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100348691
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
100348691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
100348691
NCBI-ProteinID:
XP_002720811
Ensembl:
ENSOCUG00000001295
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAVHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPIENDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagaccctgaacggcggaatcaccgacatgctcacg
gaactcgctaactttgagaagaacgtgaaccaggctgtccacaagtacaatgcttacaga
aaagcagcatctgttatagccaagtatccacacaaaatcaagagtggggcggaagctaag
aaattgcctggagtaggaacaaaaattgctgaaaagattgatgagtttttagcgactgga
aagttgcgtaaactggaaaagattcgtcaggatgatacgagttcatctattaatttcctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcaggaaaaatgaagataaattgaaccatcaccagcgaattggatta
aaatattttgaggactttgagaaaagaattcctcgggaagagatgctacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgagtacattgctactgtctgtggcagt
ttcaggagaggggcagaatccagtggtgacatggatgtcctgctgacccatccaagcttt
acctcggaatcagccaagcagccaaagctgttacaccgtgttgtggagcagttacaaaag
gtccattttattacagacactctgtcaaagggtgaaacaaagttcatgggtgtctgccag
cttcccattgagaatgatgaaaaggaatacccacacagaagaatcgatatcaggttgata
cccaaagatcagtactactgtggtgttctctatttcactgggagtgatattttcaataag
aatatgagagcccacgccctggaaaagggcttcacaatcaacgagtacaccattcgtccc
ctgggagtcactggagtggctggagaacccctgccagtggatagcgagaaagacatcttt
gactacatccagtggaagtaccgggaacccaaggatcggagcgaatga
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integrated database retrieval system