KEGG   Oryctolagus cuniculus (rabbit): 100348691
Entry
100348691         CDS       T03373                                 
Name
(RefSeq) DNA polymerase beta isoform X1
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03410  Base excision repair
ocu05166  Human T-cell leukemia virus 1 infection
ocu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100348691
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100348691
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100348691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100348691
Enzymes [BR:ocu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100348691
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100348691
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     100348691
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 HHH Cdd1 HHH_2 NTP_transf_2
Other DBs
NCBI-GeneID: 100348691
NCBI-ProteinID: XP_002720811
Ensembl: ENSOCUG00000001295
LinkDB
Position
Unknown
AA seq 335 aa
MSKRKAPQETLNGGITDMLTELANFEKNVNQAVHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPIENDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaggcgccgcaggagaccctgaacggcggaatcaccgacatgctcacg
gaactcgctaactttgagaagaacgtgaaccaggctgtccacaagtacaatgcttacaga
aaagcagcatctgttatagccaagtatccacacaaaatcaagagtggggcggaagctaag
aaattgcctggagtaggaacaaaaattgctgaaaagattgatgagtttttagcgactgga
aagttgcgtaaactggaaaagattcgtcaggatgatacgagttcatctattaatttcctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcaggaaaaatgaagataaattgaaccatcaccagcgaattggatta
aaatattttgaggactttgagaaaagaattcctcgggaagagatgctacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgagtacattgctactgtctgtggcagt
ttcaggagaggggcagaatccagtggtgacatggatgtcctgctgacccatccaagcttt
acctcggaatcagccaagcagccaaagctgttacaccgtgttgtggagcagttacaaaag
gtccattttattacagacactctgtcaaagggtgaaacaaagttcatgggtgtctgccag
cttcccattgagaatgatgaaaaggaatacccacacagaagaatcgatatcaggttgata
cccaaagatcagtactactgtggtgttctctatttcactgggagtgatattttcaataag
aatatgagagcccacgccctggaaaagggcttcacaatcaacgagtacaccattcgtccc
ctgggagtcactggagtggctggagaacccctgccagtggatagcgagaaagacatcttt
gactacatccagtggaagtaccgggaacccaaggatcggagcgaatga

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