Oryctolagus cuniculus (rabbit): 100348900
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Entry
100348900 CDS
T03373
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04082
Neuroactive ligand signaling
ocu04721
Synaptic vesicle cycle
ocu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100348900
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100348900
04721 Synaptic vesicle cycle
100348900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100348900
Transporters [BR:
ocu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100348900
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100348900
NCBI-ProteinID:
XP_002713096
Ensembl:
ENSOCUG00000001627
UniProt:
G1SFT3
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Position
9:103209676..103322396
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AA seq
628 aa
AA seq
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MTAEKTLPLGNGKAAEEARESEALAGGDAASARDPRDKAVQERGHWNNKVEFVLSVAGEI
IGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKICP
LFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTERCVEFQKLN
MSNHSHVSLQNATSPVMEFWERRVLAISDGIQHIGNLRWELALCLLAAWTICYFCIWKGT
KSTGKVVYVTATFPYIMLLILLVRGVTLPGAAEGVKFYLYPDLSRLSDPQVWVDAGTQIF
FSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAFEQGVPI
AEVAESGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESLVTAVVDMYP
KVFRRGYRRELLILALSVVSYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCI
GWVYGSNRFYDNIEDMIGYRPVSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYP
AWGYGIGWLMALSSMLCIPLWVAVKMWQTEGSLPEKLRKLTVPSPDLKMRGKLGSSPRTV
TVNDCDAKLKSDGSIGSIAAITEKETHF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagaagacgctgcccctgggcaatggcaaggctgccgaggaggcgcgggag
tcggaggcgctggccggcggcgacgcggcgtctgcgcgcgacccgcgggacaaggcggtc
caagagcgcggccactggaacaacaaggtggagttcgtgctgagcgtggccggggagatc
atcgggctgggcaacgtgtggcgcttcccttacctgtgctacaagaacggaggcggggcg
tttctgattccctacgtggtgttctttatctgctgtggcatccccgtgttcttcctggag
accgccctgggccagttcaccagcgagggcggcatcacgtgctggaggaaaatctgccct
ttatttgaaggcatcggctacgccacgcaggtgatcgaggcccatctgaacgtgtactac
atcatcattctggcctgggccatcttctacctgagcaactgctttaccactgagctcccc
tgggccacctgtgggcacgagtggaacacagagcgctgtgtggagttccagaaactgaac
atgagcaaccacagccacgtgtccctgcagaacgccacctcccctgtcatggaattctgg
gagcgcagggtcctggccatctcggatgggatccagcacatcgggaacctgcgctgggag
ctggccttgtgtctcctggcagcgtggaccatctgctacttctgtatctggaaggggacc
aagtccacgggaaaggtcgtctatgtcaccgccaccttcccctacatcatgctgctcatc
ctcctggtgcgaggggtcacgctgccgggggccgctgaaggcgtcaagttctacctgtac
cctgacctctcacggctctccgacccccaggtctgggtggatgccggcacgcagatcttc
ttctcctatgccatctgcctgggctgtctgacggcgctgggaagttacaacaattacaac
aacaactgctacagggactgcatcatgctctgctgtctgaacagcggcaccagcttcgtg
gccggctttgccatcttctcggtcctgggcttcatggcgttcgagcagggagtccccatc
gccgaggtggcggagtcaggtcctggcctggccttcatcgcctaccccaaggctgtcacc
atgatgcccctctccccgctgtgggccgccttgttcttcatgatgctcatcttcctgggc
ctggacagccagtttgtgtgcgtggaaagcctggtgaccgctgtggtagacatgtacccc
aaggtcttccggaggggctaccggcgtgagctgctcatcctggcgctgtcggtcgtctcc
tactttctgggcctcgtgatgttgaccgagggcggcatgtacatcttccagctcttcgac
tcctacgccgccagcgggatgtgcctcctcttcgtggccatctttgagtgtgtctgcatt
ggctgggtgtacggaagcaaccggttctatgacaacatcgaagacatgattggctatcgg
cccgtgtcacttattaagtggtgctggaaggtcgtgactcctgggatctgcgcgggcatc
ttcatcttcttcctggtcaagtacaagccactcaagtacaacaacgtgtacacctaccca
gcctggggctacggcatcggctggctcatggccctgtcctccatgctctgtatcccactc
tgggttgccgtcaagatgtggcagacggaaggctccctgcccgagaaactgcggaagctg
acggtccccagccccgacctgaagatgcgtggcaagcttggctcaagcccacggacggtg
acggttaatgactgtgacgccaagctcaagagcgacggctccatcggctccatcgcggcc
atcacagagaaggagacgcacttctga
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