Oryctolagus cuniculus (rabbit): 100349155
Help
Entry
100349155 CDS
T03373
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
ocu04145
Phagosome
ocu04612
Antigen processing and presentation
ocu05163
Human cytomegalovirus infection
ocu05168
Herpes simplex virus 1 infection
ocu05169
Epstein-Barr virus infection
ocu05170
Human immunodeficiency virus 1 infection
ocu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100349155
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100349155
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100349155
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100349155
05163 Human cytomegalovirus infection
100349155
05169 Epstein-Barr virus infection
100349155
09163 Immune disease
05340 Primary immunodeficiency
100349155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100349155
Enzymes [BR:
ocu01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100349155
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100349155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
ABC_ATPase
AAA_22
AAA_29
AAA_25
AAA_23
AAA_15
AAA_33
AAA_30
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-GeneID:
100349155
NCBI-ProteinID:
XP_002714647
Ensembl:
ENSOCUG00000002135
UniProt:
G1SGW1
LinkDB
All DBs
Position
12:132386989..132396912
Genome browser
AA seq
742 aa
AA seq
DB search
MASSGSPAPCRASLAWLGAPLLLLADWALLRVALPGIFSRLLPPAWPLLRVWAAGLGRWA
VLRLGARAVLEATAGGQGRSARVAGGLAALEPLAAALGLALPGLALFRELVSWGVRRDAG
STRLLHWGSRPDAFALSYAAALPAVALWHLLGSLWRPVRPGGSVDAVRRLLGCLGPDIRR
LPLVLTLLVLSCLGEMAIPFFTGRLTDWIVQDGTAAAFAGNLTLMSILTVASALLEFLGD
GIYNSTMDRSHAHLQGEVFRAVLRQETEFFQQNQTGAITSRVTEDTSTLSESLSEKLSLL
LWYLVRGLCLMGLMLWESLSLTMVTLLTLPLLFLLPKKLGKWYELLEVQVRESLAESSQV
AIEALSAMPTVRSFANEEGEAQKFRKKLQEVKTFNQKQAVAYAVNLWSTSISGMLLKVVI
LYMGGRLVTSGAVSSGNLVTFVLYQIQFTTAVEVLLSTYPHVQKAVGSSKKIFEYLDRTP
CSPPSGQLIPVNLNGIVKFQDVSFAYPNRPEVSVLQGLTLTLRPGEVTALVGPNGSGKST
VAALLQNLYQPTRGRLLLDGKPLPQYEHCYLHRQVAAVGQEPQLFARSLRENIAYGLMET
PTLEEVIAAAVESGAHGFISGLPHGYNTDVGEAGGQLSGGQRQAVALARALIRKPRVLIL
DDATSALDADNQLRVERILYESPGRASRAVLLITQRLSLVEQAHHILFLEGGVVCEEGTH
QQLMEKRGRYWAMVEAPAGAPE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcggggtcgccggctccgtgccgggcgtcgctggcgtggctgggggcgccg
ctgctgcttctggccgactgggcgctgctccgggtggcgctgcccggcatattctcgcgc
ctgctgcccccggcgtggccgctgctccgggtgtgggcggcgggcctgggccgctgggcc
gtgctgcggctgggggcccgcgccgtcctcgaggccacggctggaggccagggccggagt
gcacgtgtcgcgggaggcctggccgctctggagccgctggcggccgcgctgggcttggcc
ctgccaggacttgccttgttccgagagctggtctcatggggcgtccgccgggacgccggc
agcacccggctcctgcactggggaagtcgccccgacgccttcgcgctcagctatgcggcc
gccctgcccgcggtcgccctgtggcacctgctcgggagcctgtggcggcccgttcgcccg
gggggctctgtagacgccgtgcgccggctcctgggctgcctgggcccggacatccgtcgc
ctgccgctcgtcctgaccctgctggtcctctcctgcctaggggagatggccattcctttc
ttcactggccgcctcactgactggattgtccaggatgggacagccgctgccttcgctgga
aacttaactctcatgtccattctcaccgtagccagtgccctgctggagttcctgggtgat
gggatctacaacagcaccatggaccgctcacacgcccacttgcagggagaggtgtttcgg
gccgtcctgcgccaggagacggagtttttccagcagaaccaaacaggtgccatcacatca
cgagtaacagaggacacgtccaccctgagtgagtcgctgagtgagaagctgagcctgttg
ctgtggtacctggtgcgggggctgtgtctcatggggctcatgctctgggagtcactgtcc
ctcaccatggtcacactgctcaccctgcctctgcttttccttctgcctaagaagctggga
aaatggtacgagttgctggaagtgcaggtgcgggaatctctggcagagtccagccaggtg
gccattgaagctctgtccgctatgcctacagtccggagcttcgccaatgaggagggcgag
gcccagaagtttaggaaaaagctgcaggaagtcaagaccttcaaccagaagcaggccgtg
gcctatgcagttaacctgtggagcaccagtatctcagggatgctgctgaaggtggtaatc
ctgtacatgggggggcggctggtgacgagtggggctgtgagcagtgggaacctcgtcacc
tttgttctctaccagatccagttcaccacagctgttgaggtcctgctctccacctatccc
catgtgcagaaggctgtgggctcctccaagaaaatatttgaatacctggaccggacccct
tgcagcccacctagtggtcagttgattcccgtgaacctgaatgggattgtcaagttccaa
gacgtctcctttgcctaccccaaccgtccagaagtctcagtgctgcagggcctgacactc
accctccgtcccggggaggtgacggcgctggtgggacccaacgggtctgggaagagcacg
gtggccgcgctgctgcagaatctgtaccagcccaccagggggcgcctgctactggacggg
aaaccccttccccaatatgagcactgctacctgcacagacaggtggctgcagtggggcaa
gagccacagctatttgcaagaagtcttagagaaaatattgcctacggcctgatggagacg
ccgactctggaggaagtcatcgctgctgcagtggagtcaggggcccatggcttcatttcg
ggactcccgcatggctacaacacagatgtaggggaagctggaggccaactgtcagggggg
cagcggcaggcagtggccttggcccgagctttgatccggaaaccacgagtgctcatccta
gacgatgccaccagtgccctggatgcagacaaccagttacgggtggagcggatcctgtat
gaaagccctgggagggcctctcgcgctgtgctgctcatcacgcagcgcctcagcttggtg
gagcaggcgcaccacatcctctttctggaaggaggcgttgtgtgtgaggagggaacccac
cagcagctcatggagaagaggggacgctactgggccatggtggaagctcctgcaggcgct
ccagaatga
Oryctolagus cuniculus (rabbit): 100351666
Help
Entry
100351666 CDS
T03373
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
ocu04145
Phagosome
ocu04612
Antigen processing and presentation
ocu05163
Human cytomegalovirus infection
ocu05168
Herpes simplex virus 1 infection
ocu05169
Epstein-Barr virus infection
ocu05170
Human immunodeficiency virus 1 infection
ocu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100351666
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100351666
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100351666
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100351666
05163 Human cytomegalovirus infection
100351666
05169 Epstein-Barr virus infection
100351666
09163 Immune disease
05340 Primary immunodeficiency
100351666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100351666
Enzymes [BR:
ocu01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100351666
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100351666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_21
AAA_25
AAA_29
AAA_23
AAA_15
AAA_16
Zeta_toxin
AAA_33
SRP54
Motif
Other DBs
NCBI-GeneID:
100351666
NCBI-ProteinID:
XP_002714655
Ensembl:
ENSOCUG00000002489
UniProt:
G1TNZ8
LinkDB
All DBs
Position
12:132403263..132412088
Genome browser
AA seq
703 aa
AA seq
DB search
MPLPDPRPWASLLVADLALLWLLQGTVGALLPQGLPGLWLEGTLRLGGLWGLLTLGGLSG
LVRTRLPVLCLATPLFFSLRALVAGAASAPAASVASAPWSWLLLGYGAAGLSCAVWAVLS
SPGAAEGAQAREDSRALMWRLLKLSRPDLPFLAAASVFLVFAVLGETVIPHYSGRVIDIL
GSDFEPEAFVSAIFFMCLFSVGSSLSAGCRGGFFTLIMSRINVRVREQLFSSLLRQDLGF
FQETKTGELNSRLSSDTLLMSRWLPLNANVLLRSLVKVVGLYGFMLYASPQLTFLSLLDV
PLTIAAEKVYSSRHQAVLLEIQDAVARAGQVVREAVGGLPTVRSFGAEEHEVCRYKEALE
KCRQLWWRRDLERALYLLLRRLLQLGMQVLMLNCGLRQILAGELTQGGLLSFLFYQEEVG
RYVHTLVYMWGDMLSNVGAAEKVFRYLDRTPNLPPAGTLAPPTLQGLVEFQDVSFAYPSR
PDQPVLQGLTLTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGRLLLDGNPISEYEHH
YLHRQVAVVGQEPVLFSGSVRDNIAYGLVNCGDDQVMAAVRAARADDFIREMERGIFTDV
GEKGSQLAVGQKQRVAIARALVRDPRVLILDEATSALDVQCEQALQDWKSQGDRVVLVIA
HRLQTIQNADQILVLRQGRLLEPAQLREGQDLYSRLVQQQLQD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcccggacccgagaccctgggcttcgctgctggtggcggatttggccttgctc
tggctgcttcaggggactgtgggggctttgctcccccaggggcttccaggactgtggctg
gaggggaccctgcgactcggggggctgtggggactgctaactctgggagggctgtcgggg
ctggtgaggacccggctacccgtgctgtgcctggccacgccactgtttttctcgctgagg
gccctggtcgcaggggcggcgagtgcgcccgcagccagtgtggcttccgcgccgtggagc
tggctgctgttgggctacggggcggcggggctgagctgcgccgtgtgggctgtgctgagc
tccccgggagcggcagagggcgctcaggcccgggaggacagcagagcgttgatgtggaga
ttgctgaagctctccaggccagacctgcctttcctcgccgctgcctccgtcttcctggtg
tttgctgttttgggggagaccgtaatccctcactattccggtcgtgtgattgacatcctg
ggaagtgattttgagcccgaggcatttgtcagcgccatctttttcatgtgcctcttctct
gttggcagctcgctgtctgcaggctgccgaggaggcttcttcacgctcatcatgtccaga
atcaacgtgcgggtccgggagcagctcttctcctcactgctacgccaggacctgggtttc
ttccaggagactaagacaggagagctgaactcacggctgagctccgacaccttgctgatg
agccgctggctgcctctgaacgccaatgtgctcttgcgaagcctggtgaaagtggtgggg
ctgtacggcttcatgctgtacgcgtccccccagctgaccttcctctctctgctcgatgtg
cccctcaccatagcagccgagaaggtgtacagcagccgccaccaggcggtgctgctggag
atccaggacgcggtggcgagggcagggcaggtggtgcgggaggccgtcggagggctgccg
accgtgcgcagttttggggccgaggagcacgaagtctgtcgctacaaggaggccctggaa
aaatgccggcagctgtggtggcgacgagacctggagcgagccctgtacctgctcctgcgc
aggctgctgcaactggggatgcaggtgctgatgctgaactgcgggctgcggcagatcctg
gctggcgagctcacgcagggcgggctgctctccttcctgttctaccaggaggaggtgggc
cgctatgtgcacacactggtgtacatgtggggggatatgctgagcaacgtgggagctgct
gagaaagtgtttcgctacctggaccggacgccaaatctgcccccagcggggaccctggct
cctcccacgctgcaggggctcgtggaattccaagacgtctcctttgcatatcccagtcgc
cctgaccaacctgtgctgcaggggctgacactcaccctccgtcccggggaggtgacggcg
ctggtgggacccaacgggtctgggaagagcacggtggccgcgctgctgcagaatctgtac
cagcccaccggggggcgcctgctgctggacgggaatcccatctcagaatacgagcaccac
tacctgcaccgccaggtggctgtggtcgggcaggagcctgtgctgttctcgggttccgtg
agggacaacatcgcctatgggcttgtgaactgcggggacgaccaggtgatggctgccgtg
cgggctgcgcgggcggacgacttcataagggaaatggagcgtgggatattcacagatgtc
ggggagaaggggagtcagctggctgtgggacagaagcaacgtgtggccatcgcccgggcc
ctggtgcgggacccacgggttctcatcctggatgaggccaccagtgccctggacgtgcag
tgtgagcaggccctgcaggactggaagtcccagggtgaccgagtggtgctggtgatcgcc
cacaggctgcagacaatccagaacgccgaccagatcctggtgctgaggcagggaaggctg
ctggagcccgcccagctccgggagggccaggacctctacagccgcctggtgcagcagcag
ctgcaggactga
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integrated database retrieval system