Oryctolagus cuniculus (rabbit): 100351030
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Entry
100351030 CDS
T03373
Name
(RefSeq) DNA polymerase lambda isoform X3
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03410
Base excision repair
ocu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100351030
03450 Non-homologous end-joining
100351030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100351030
Enzymes [BR:
ocu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100351030
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100351030
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
100351030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
NTP_transf_2
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100351030
NCBI-ProteinID:
XP_008268607
Ensembl:
ENSOCUG00000015364
LinkDB
All DBs
Position
18:complement(46516732..46525264)
Genome browser
AA seq
534 aa
AA seq
DB search
MTAALTSLGQKSQEQASMDPGGILKAFPKRKKIHTNSSPKAFAKIPKREEGEAAGEWLHS
LRVHVVPTGIGRARAELFEKQVVQHGGQVCPAQAPGVTHIVVDEDVDCERALRLLRLPRL
PAGARLVKSAWLSLCLQEQRLVDTAGFQVFVPSRYLDQPQPSKADGDSSPPPGTHEALLR
TALSPASPPTRPGALPPKAGKAPSTQAQPASDDEASDGEEPQVSAADLEALLSGHYPTRP
EGDAEPSPAPEALEKWVCAQPSSQKATNHNSHITEKLEVLAKAYSVQGDKWRALGYAKAI
NALKSFPKPVSSYQGFRSLEDIRSQASLTTQQAIGLKHYDDFLERMPREEAAEIEQTVRE
AAQAFNPGLLCVACGSFRRGKATCGDVDVLITHPDGRAHQGIFSRLLDSLRQRGFLTDDL
VSHEENGLQQKYLGVCRLPGPGRRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALAK
TKGMSLSEHTLSMAVVRNSRGCKVAPGQALPTPTEKDVFRLLGLPYREPAERDW
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgctctgaccagcctgggacagaaaagccaggagcaagcttccatggacccc
gggggcatcttgaaggcgtttcccaagcggaagaaaattcataccaactcatcaccaaaa
gcgtttgcaaagattcccaagagggaagaaggagaagcagcaggagagtggctccactcc
ctgcgggtccacgttgtgcccaccggcatcggacgagcccgggcagaactctttgagaag
caggttgtgcagcatggcggccaggtgtgccctgcccaggccccaggggtcactcacatc
gtggtggatgaggacgtggactgtgagcgggccctgcgcctcctgagactgccccggctg
cccgcgggtgctcggctggtgaagtcggcgtggctgagcttgtgcctgcaggagcaaagg
ctggtggacacggctggattccaggtcttcgtccccagcaggtacttggaccaaccgcag
cccagtaaggcagatggagactcatctcctcctcctggcacccacgaggctctgcttagg
acagccctctctcctgcgtcccctcccaccagacccggagctcttcccccaaaggcagga
aaggcaccaagcacccaagcccagcccgcctctgatgatgaagccagcgatggggaagag
ccccaggttagcgctgccgatctggaagccctgctcagcggccactaccctacccgccct
gagggagatgcggagcccagcccagccccggaggccctggagaaatgggtctgtgcacag
ccctcgagccagaaggcaaccaaccacaactcccacatcacggagaagctggaagtgttg
gccaaagcctacagcgtccagggagacaagtggagggctctgggctatgccaaagccatc
aatgccctcaagagcttccccaagcctgtttcctcctaccagggtttccggagcctggaa
gacatccgcagccaggcctctctgactacccagcaggccatcggcctgaagcattacgat
gacttcctggaacgcatgcccagggaggaggcagcagagatcgagcagacggtccgggaa
gctgcccaggccttcaaccccgggctgctgtgtgtggcctgcggctcgttccggcggggc
aaggcgacctgcggcgacgtggacgtgctcatcactcacccggacggccgggcccaccag
ggcatcttcagtcgtctccttgacagccttcggcagcgagggttcctcacagatgacctg
gtgagccacgaggagaacggcctgcaacagaagtacctgggcgtgtgccggctgccgggc
cccgggcggcggcaccggcgactggacatcatcatcgtaccctacagcgagtttgcctgc
gccctgctctacttcactggctccgcccacttcaaccggtccatgcgggccctggccaag
accaagggcatgagcttgtcagagcacaccctcagcatggctgtggtccggaactcccgc
ggctgcaaggtggcgcctggccaggcgctgcccacccccaccgagaaggacgtcttcagg
ctcctaggactgccctaccgagaaccagccgagcgggactggtga
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