Oryctolagus cuniculus (rabbit): 100351115
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Entry
100351115 CDS
T03373
Name
(RefSeq) aprataxin isoform X2
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100351115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100351115
Enzymes [BR:
ocu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
100351115
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
100351115
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
100351115
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100351115
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
100351115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
FtsK_SpoIIIE_N
Glycoamylase
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
100351115
NCBI-ProteinID:
XP_002707991
Ensembl:
ENSOCUG00000000738
LinkDB
All DBs
Position
1:34544618..34578144
Genome browser
AA seq
340 aa
AA seq
DB search
MRVCWLVRQDSQHQRIKLPHLEAVVIGRSPETKITDKKCSRQQVQLKAECNKGYVKVKQV
GVNPTSIDSVIIGKDQEMKLYPGQVLCMVNELYPYIVEFEEEAKSSGLETHRKRKRSGNN
DSVERDAAQEAEPGTGLGPGSSPSHCPVPPKKGKDASTNKEPLGHWSQGLKISMQDPKMQ
VYKDEQVVVIKDKYPKARYHWLVLPWASISSLKAVTREHLELLKHMHTVGEKVIADFGSS
KLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIGMVQEAGG
VTVRDGTSELLKLPLRCHECQQQLPSIPQLKEHLRKHWTA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtgctggttggtgagacaggacagccagcaccagcgaatcaaacttccacat
ttggaagcagttgtgattggacgcagcccagagaccaagatcactgataagaaatgttct
cgacagcaagtacagttgaaagcggagtgtaacaagggatatgtgaaggtaaagcaggtg
ggggtcaatcccaccagcattgactcagtcatcattgggaaggaccaagagatgaagctg
taccctggccaggttctctgcatggtgaatgaactttatccatatattgtagagtttgag
gaagaggcaaagagctctggcctggaaacacacaggaagagaaagaggtcaggcaacaat
gattctgttgaaagggatgctgcccaggaagctgagcctggcacagggctcggacctggg
agcagccccagccactgtcctgtgcccccaaagaaggggaaggatgcatctaccaacaag
gaacctctgggtcactggagtcaaggcttgaagatttcaatgcaggaccccaaaatgcag
gtctacaaagatgagcaggtggtagtgattaaggataaatatccgaaggcccgttaccac
tggctggttttaccatgggcctccatttccagtctgaaggctgtgaccagggaacacctt
gaactcctcaaacatatgcacactgtaggggaaaaggtgattgcagattttgggtccagc
aaactccgcttccgactgggctaccacgccattcctagcatgagccatgtacaccttcat
gtgatcagccaggattttgattctccttgccttaaaaataaaaaacactggaattctttc
aatacagaatacttcctagaatcacaagctgtgatcgggatggtgcaagaggctggcgga
gtgactgtccgagatgggacctctgagctcctgaagctgccccttcgttgtcatgagtgc
cagcagcagctgccttccattcctcagctgaaggagcatctcaggaagcactggacagcg
tga
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