KEGG   Oryctolagus cuniculus (rabbit): 100352993
Entry
100352993         CDS       T03373                                 
Name
(RefSeq) lysine-specific demethylase 2A isoform X2
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100352993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocu03000]
    100352993
   04121 Ubiquitin system [BR:ocu04121]
    100352993
   03036 Chromosome and associated proteins [BR:ocu03036]
    100352993
Enzymes [BR:ocu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     100352993
Transcription factors [BR:ocu03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100352993
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     100352993
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100352993
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100352993
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box DUF7885 JmjC Cupin_8 LRR_4 Cupin_1
Other DBs
NCBI-GeneID: 100352993
NCBI-ProteinID: XP_002709273
Ensembl: ENSOCUG00000009988
UniProt: A0A5F9CPA4
LinkDB
Position
1:208319704..208452127
AA seq 1161 aa
MNGFDKYSGEGLLQRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGEEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGRACRNLPSLKKT
LSGDSSSDSSRGSHNGQVWDAQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDDSWMQREVWMSV
FRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSW
TNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRD
LLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQS
SNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHFI
SDLSINSLYCLSDEKLIQKIS
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgaatggttttgacaaatacagtggtgaaggcctccttcagcgtggtaccatgagacgg
cgctatgaagacgatggcatttcagatgatgaaattgaagggaaaagaacttttgatttg
gaagaaaaactccacaccaacaaatataatgccaattttgtaacttttatggaaggaaaa
gattttaatgtagagtatatccagcggggtggcttgagagaccctctaattttcaagaat
tctgatggacttggaataaagatgccagacccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgccgcatggtggatgtcatggatgtgaacacacagaagggcattgag
atgaccatggcccagtggactcgctactacgagaccccagaagaggagcgagagaagctc
tataatgtcatcagcctagagttcagccacaccaggctagaaaacatggtgcagaggccc
tccacggtggatttcattgactgggtagacaacatgtggccaaggcatttaaaagaaagt
cagactgaatctacaaatgccatcttggagatgcagtaccctaaagtgcagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtatcagattgccagcgcattgagctcaagcagggctataccttcgtcattccttca
ggctggattcatgccgtgtatactcctacagacacgttagtatttggaggcaactttctg
catagcttcaacatccctatgcagctaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgctatccattctactatgagatgtgttggtatgtcttggagcgctat
gtgtactgtataaccaaccgttcccacctaacgaaggagtttcagaaagagtccctcagc
atggatctggagttgaatgggttggagtctggaaacggagaagaggaagcagtggatcga
gagccccggcgcctgagcagcaggcgttctgtcctcactagcccggtagctaatggggtc
aacctggattatgatggattgggcagagcctgccgaaatcttccaagtctgaagaaaact
ttgtctggggactcctcctctgactccagccggggctcccacaatggccaagtgtgggat
gcccagtgcagccctcggaaggacaggcaggtgcatctcacccattttgagcttgaaggc
cttcgctgtcttgtcgataagttggaatctctgccactgcataaaaagtgtgtccccacg
gggatcgaagacgaagacgcacttattgccgacgtgaagattttactggaggagcttgcc
aacagcgatcccaagttagccctcactggagtccctatagtgcagtggccaaaaagggat
aagcttaaattccccacccggccaaaggtgcgggtccctaccatccccatcacaaagcct
cacactatgaagccagctccacgcttaacccctgtgaggccagctgctgcatcccctatc
gtgtcaggagccaggcggagacgagtgcgatgtcgaaaatgcaaagcctgtgtgcaagga
gagtgtggtgtttgccactactgcagggacatgaagaagttcggggggcctggacgcatg
aagcagtcctgtgtcctccgacagtgcttggcacccaggctgcctcactcggtcacatgt
tccctctgtggagaggtggatcagaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagatcgtgcatcctggctgcctgcagatggatggagaaggc
ctgcttaatgaggaattgccgaactgctgggagtgccccaagtgctaccaggaggacagc
tcggagaaagcccagaaacggaaaatggaagagagcgatgaagaagccgtacaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacacccccgcctcactcacccact
tccatgctgcagctcatccatgacccggtgtccccccggggcatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgcgatgagcgcttcaagaggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggagaaggagaacaatccg
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaacctgcgccattccccccgtgtgctagtgcagcactgc
ccagcccgcaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggccgg
ggcagttgggctcaggacggagacgacagctggatgcagcgggaggtctggatgtctgtc
ttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtggtat
aaatggtgctgcgacaagagactttggacgaaaattgacttaagtaggtgtaaggccatc
gtaccacaagctctcagtggcatcatcaagaggcaaccagttagcctcgacctcagttgg
accaacatctccaaaaagcagttgacgtggctcgtcaataggctgccagggctgaaagac
ctcctcctagcaggctgctcctggtctgcagtctctgctctcagcacctccagctgcccc
cttctcaggacccttgatctccggtgggcagtaggaattaaggaccctcaaattcgggac
ttgctgactccacccgctgataaaccaggtcaggacaatcgcagcaagctccggaacatg
actgacttccggctggcgggcctggacatcacggacgccacgcttcgcctcatcatccgc
cacatgcccctcctgtctcgcctcgacctcagccactgcagccaccttacagatcagtcc
tccaacctcctcacagccgtcgggtcttccacccgctactccctcacagagctcaacatg
gcaggttgcaataagttgacagaccagaccctgatctacctacggcgcattgccaacgtc
accttgatcgaccttcgcgggtgcaagcagatcactaggaaagcctgcgagcacttcatc
tcagacctgtccatcaacagcctctactgcctgtcagacgagaagctgatacagaagatc
agctag

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