Oryctolagus cuniculus (rabbit): 100353006
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Entry
100353006 CDS
T03373
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X6
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100353006
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocu01002
]
100353006
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100353006
03036 Chromosome and associated proteins [BR:
ocu03036
]
100353006
Peptidases and inhibitors [BR:
ocu01002
]
Metallo peptidases
Family M1
100353006
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100353006
Coactivators
SAGA/TFTC/STAGA complex
100353006
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100353006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
RPN2_C
AP3D1
Motif
Other DBs
NCBI-GeneID:
100353006
NCBI-ProteinID:
XP_008254081
Ensembl:
ENSOCUG00000017950
LinkDB
All DBs
Position
3:complement(135266923..135403245)
Genome browser
AA seq
1050 aa
AA seq
DB search
MVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLAIGPFEILVDPYMHEVTHFCLP
QLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFIDEAYVEVAAYASMSIFSTNLLH
SAMIIDETPLTRRCLAQSLAQQFFGCFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNEY
RHWIKEELDRIVAYELKTGGVLLHPIFGGGKEKDNPASHLHFSIKHPHTLSWEYYTMFQC
KAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVS
GKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYTSPGTQKYVGPLKVTVQEL
DGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRID
PDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLALTDILEQEQCF
YRVRMSACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCKTCPNIVKTNNFMSFQSYFLQK
TMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVS
VNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDP
ALFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQTDPVPYVRHKILNMLT
KNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLPLPE
LGLVLNLKEKKAVLNPTIIPEAIAGTQETTSNPGSHAQLVAFQNPFSNSQDEEEIDMDTV
HDSQAFISHHLNMLERPSTPGLSKYRPTTSRSLTSQHSSGCDGTPSTKPQWSMELARKGT
GKEQAPLEMSMHPVAAAPLSVFAKESASSKHSEHHHHHHHEHKKKKKKHKHKHKHKHKHD
SKDKDKEPFAFSSPASGRCMRQQNGGKYNFICKYFQTAFHFKVKVGKKLVNIPSTSMSYF
PVTELLGILVFLYRTVPYCIGHFTSLVAAH
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgtttccaatggagatctggtggagacagtatatacccacgatatgaggaag
aagaccttccattatatgctcaccattcctacagcagcatcaaatatttccttggccatt
ggaccttttgaaatacttgtagatccatatatgcatgaggttactcatttttgtttacca
caacttcttccactgcttaaacatacaacatcatatcttcatgaagtctttgaattttac
gaagaaattcttacatgtcgatacccatattcctgttttaagaccgtgttcattgatgag
gcttatgttgaagtggctgcttatgcttccatgagcattttcagtacaaatcttttacac
agtgccatgattatagatgagacacctttgactagaaggtgtttagctcagtccttggct
cagcagtttttcggatgtttcatatctagaatgtcttggtctgatgaatgggtgctaaaa
gggatttcaggatatatttatggactttggatgaaaaaaacttttggtgttaatgagtac
cgccattggattaaagaggaactagacagaatagtggcgtatgaactgaaaactggtgga
gttttactacatcccatatttggtggcggaaaagaaaaggataatccagcatcccatcta
catttttcaatcaagcatccacatacattgtcctgggaatattatactatgtttcagtgt
aaagctcaccttgtgatgagattgattgaaaatagaatcagtatggaattcatgctacaa
gttttcaataaactgctaagtctagccagcactgcttcatctcagaagttccagtcacat
atgtggagtcagatgttggtttccacatctgggtttttgaaatccatttcaaatgtctct
ggcaaagacatccagcctttaataaagcagtgggtagaccagagtggggtggtaaaattt
tatggaagttttgcatttaacagaaaacgaaatgtcttggaattggaaataaagcaagat
tatacatctcctggaactcagaaatatgtgggaccacttaaagtgacagtgcaggaatta
gacggatcctttaatcatacattgcaaatagaagaaaacagccttaagcatgatattccc
tgccattctaaaagcagaaggaataagaaaaaaaagatcccactgatgaatggagaagaa
gtggacatggatctttctgcaatggatgctgattcccctttgctgtggataaggatagat
ccagatatgtcagtattaaggaaggtagaatttgagcaggctgattttatgtggcagtat
caactccgctatgagagggatgttgttgctcagcaggaatccatattggccttggaaaaa
tttcccactccagcatctcggcttgcactcactgacatattagaacaagagcagtgtttc
taccgagtaagaatgtcagcttgcttctgccttgcaaagattgcaaattcaatggtgagc
acatggacaggaccaccagccatgaagtcactgtttactagaatgttttgttgcaaaact
tgtccaaacattgtgaaaacaaacaactttatgagctttcaaagttactttctacagaag
actatgccagttgcaatggctttattaagagatgttcataacctttgtcccaaagaagtc
ttaacatttattttagacttgatcaaatataatgacaacagaaaaaacaagttttcagat
aattattaccgtgcagaaatgattgatgccctggccaactctgttactcctgcagttagt
gtgaataatgaggttagaactttggataacctcaatcctgatgtgagactcattcttgaa
gaaatcactaggtttctgaatatggaaaaacttctcccaagttatagacataccatcact
gtcagttgtttgagagccatacgggtgcttcagaagaatggacatgtgccaagtgatcca
gctctttttaaatcttatgctgaatatggccactttgtggatattaggatagcagcttta
gaagcagttgttgattatactaaagtggacaggagttatgaagaactgcaatggctactt
aatatgattcagaccgatcctgtaccctatgtaaggcacaaaattctgaacatgttgact
aagaaccctccatttacaaagaacatggagtctcccttatgcaatgaggccctggtggat
caactttggaaactcatgaattctggtacttcacatgactggaggttgcgatgtggtgct
gtggacttgtacttcactctgtttggccttagtagaccttcgtgtttacccttgccagag
cttggattggttcttaatctaaaggagaaaaaagctgttctgaatcctaccattattcca
gaggccatagcaggcacccaggaaactacaagtaatccaggcagccatgcacaactggtt
gcatttcagaatcctttttcaaattctcaagatgaagaggaaattgatatggatactgtt
catgatagccaggccttcatttctcatcatctgaacatgcttgaaaggccatccactcca
gggctctctaagtatcggccaactacctcccggtctttaacatcccagcattcatcaggc
tgtgatggcacaccctccacaaaaccccagtggagtatggaacttgcacggaagggaaca
ggtaaagaacaagcgcctttggaaatgagcatgcatccagtggcagcagctccgctctcg
gtgtttgctaaggagtctgcatcctccaaacacagtgagcaccatcaccaccatcaccac
gagcacaagaaaaagaagaagaagcacaagcacaagcacaagcacaagcacaagcatgac
agcaaagacaaggacaaggagcccttcgctttctccagccctgccagcggcaggtgtatg
agacaacaaaatggaggtaagtataatttcatttgcaaatatttccaaacagcctttcat
tttaaagtaaaagttggcaagaagctggtaaacattccctctacatctatgtcatacttt
ccagtgacagaattgttgggcattttggtttttttgtataggactgtcccatactgtatt
ggacattttacatctctggttgctgcccactga
DBGET
integrated database retrieval system
