KEGG   Oryctolagus cuniculus (rabbit): 100356621
Entry
100356621         CDS       T03373                                 
Name
(RefSeq) aladin isoform X1
  KO
K14320  aladin
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100356621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100356621
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100356621
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st ANAPC4_WD40 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_CAF1B_HIR1 PD40 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th KptA_kDCL
Other DBs
NCBI-GeneID: 100356621
NCBI-ProteinID: XP_002711061
Ensembl: ENSOCUG00000011288
UniProt: G1T108
LinkDB
Position
4:complement(44710110..44720435)
AA seq 546 aa
MCSLGLFPPPPPMGQVTLYEHNNELVTGSSYESPPPDFRGQWINLPVLHLTKDPLKTPGR
LDHGTRTAFIHHREQVWKRCINAWRDVGLFGVLNEIANSEEEVFEWVKTASSWALALCRW
ASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLRVFAWHPHTNKFAVALLDDSIRVYNA
NSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLS
HPGHTPVTSLAWAPSGGRLLSASPVDAAILVWDVSTETCVPLPWFRGGGVTYLLWSPDGS
KVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSPDGNRLLFTVLGEPLIYSLSFPE
HGGEGKGGVGGAKSAAIVADLSETTIQTPAGEQRLGGEAHSMVWDPSGERLAVLMKGNPR
VQDGTPVILLFRTRNSPVFELLPCGIIQGEPGAQAQLIAFHPSFSKGALLSVCWSTGRIA
HIPLYFVNAQFPRFSPVLGRAQEPPAGGGRAVHDVALFTETSPTSAPWDPLPGPPPARTH
SPQLHL
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtgctccttggggttattccctccgccgccgcctatgggccaagtcaccctatatgag
cacaataacgagctggtgacgggcagcagctacgagagcccgcctcccgacttccggggc
cagtggatcaatcttcccgtcctacatctgaccaaggaccccctaaagactcctgggagg
ctagaccatggcacgaggactgccttcatccatcaccgggagcaagtgtggaaaagatgc
atcaacgcgtggcgcgacgtgggcctttttggggtgttgaatgaaattgcaaactcagag
gaagaggtgttcgagtgggtgaagacggcatccagctgggccctggcgctctgccgctgg
gcctcttccctccacgggtccctgttcccccacctgtctctcaggagtgaagatctgatt
gccgaatttgcccaggtcacaaactggtccagctgctgcttgcgggtttttgcgtggcac
ccacacaccaacaagtttgccgtggccctgctggacgactcgattcgtgtgtacaatgcc
aacagcactatagtcccctccctgaagcaccggctgcagcggaacgtggcagccctcgcc
tggaagcccctcagtgcctctgtgctggccgtggcctgccagagctgcatcctcatctgg
acgctggaccctacctccttgtctacccgaccgtcttccggctgcgcccaggtgctgtct
caccccgggcacacgcctgtcaccagcctggcctgggcccccagcggggggcggctgctc
tctgcttcccctgtggacgccgccatcctggtgtgggatgtctccacagagacctgcgtc
ccccttccctggtttcgaggcggtggggttacctacctgctctggtcccccgacggcagc
aaggtcctggcaaccacgccctcagctgtcttccgagtgtgggaggcccagatgtggact
tgtgagaggtggcccaccctctcggggcgctgtcagactggttgctggagccccgacgga
aaccgcctgctgttcaccgtcctgggggagccgctcatttactccctgtccttcccagaa
cacggtggcgagggaaagggcggcgtcggaggtgccaaatccgcagccatagtggcagat
ctctctgagacgaccatccagacccctgcgggggagcagaggctcggcggagaggcccac
tccatggtctgggaccccagcggggagcgtctggctgtgctcatgaaaggaaaccctcgg
gtgcaggacggcacaccagtcattctcctttttcgcacgcgaaacagccccgtgtttgag
ctgctgccctgcggcatcatccagggggagccgggcgcccaggcgcagctcatcgccttc
cacccttccttcagcaaaggggccctgctcagcgtgtgctggtccacaggccggatcgcc
cacatccccctctacttcgtcaacgctcagttcccgcgcttcagcccagtgctcggcagg
gcccaggagccccccgctggaggcggacgcgccgttcacgacgtggccctctttacggag
acctccccaacctctgccccttgggaccctctcccggggccgccacctgctcggacccac
tcccctcaactccacctgtaa

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