Oryctolagus cuniculus (rabbit): 100356621
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Entry
100356621 CDS
T03373
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100356621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100356621
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100356621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_CAF1B_HIR1
PD40
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
KptA_kDCL
Motif
Other DBs
NCBI-GeneID:
100356621
NCBI-ProteinID:
XP_002711061
Ensembl:
ENSOCUG00000011288
UniProt:
G1T108
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All DBs
Position
4:complement(44710110..44720435)
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AA seq
546 aa
AA seq
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MCSLGLFPPPPPMGQVTLYEHNNELVTGSSYESPPPDFRGQWINLPVLHLTKDPLKTPGR
LDHGTRTAFIHHREQVWKRCINAWRDVGLFGVLNEIANSEEEVFEWVKTASSWALALCRW
ASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLRVFAWHPHTNKFAVALLDDSIRVYNA
NSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLS
HPGHTPVTSLAWAPSGGRLLSASPVDAAILVWDVSTETCVPLPWFRGGGVTYLLWSPDGS
KVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSPDGNRLLFTVLGEPLIYSLSFPE
HGGEGKGGVGGAKSAAIVADLSETTIQTPAGEQRLGGEAHSMVWDPSGERLAVLMKGNPR
VQDGTPVILLFRTRNSPVFELLPCGIIQGEPGAQAQLIAFHPSFSKGALLSVCWSTGRIA
HIPLYFVNAQFPRFSPVLGRAQEPPAGGGRAVHDVALFTETSPTSAPWDPLPGPPPARTH
SPQLHL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccttggggttattccctccgccgccgcctatgggccaagtcaccctatatgag
cacaataacgagctggtgacgggcagcagctacgagagcccgcctcccgacttccggggc
cagtggatcaatcttcccgtcctacatctgaccaaggaccccctaaagactcctgggagg
ctagaccatggcacgaggactgccttcatccatcaccgggagcaagtgtggaaaagatgc
atcaacgcgtggcgcgacgtgggcctttttggggtgttgaatgaaattgcaaactcagag
gaagaggtgttcgagtgggtgaagacggcatccagctgggccctggcgctctgccgctgg
gcctcttccctccacgggtccctgttcccccacctgtctctcaggagtgaagatctgatt
gccgaatttgcccaggtcacaaactggtccagctgctgcttgcgggtttttgcgtggcac
ccacacaccaacaagtttgccgtggccctgctggacgactcgattcgtgtgtacaatgcc
aacagcactatagtcccctccctgaagcaccggctgcagcggaacgtggcagccctcgcc
tggaagcccctcagtgcctctgtgctggccgtggcctgccagagctgcatcctcatctgg
acgctggaccctacctccttgtctacccgaccgtcttccggctgcgcccaggtgctgtct
caccccgggcacacgcctgtcaccagcctggcctgggcccccagcggggggcggctgctc
tctgcttcccctgtggacgccgccatcctggtgtgggatgtctccacagagacctgcgtc
ccccttccctggtttcgaggcggtggggttacctacctgctctggtcccccgacggcagc
aaggtcctggcaaccacgccctcagctgtcttccgagtgtgggaggcccagatgtggact
tgtgagaggtggcccaccctctcggggcgctgtcagactggttgctggagccccgacgga
aaccgcctgctgttcaccgtcctgggggagccgctcatttactccctgtccttcccagaa
cacggtggcgagggaaagggcggcgtcggaggtgccaaatccgcagccatagtggcagat
ctctctgagacgaccatccagacccctgcgggggagcagaggctcggcggagaggcccac
tccatggtctgggaccccagcggggagcgtctggctgtgctcatgaaaggaaaccctcgg
gtgcaggacggcacaccagtcattctcctttttcgcacgcgaaacagccccgtgtttgag
ctgctgccctgcggcatcatccagggggagccgggcgcccaggcgcagctcatcgccttc
cacccttccttcagcaaaggggccctgctcagcgtgtgctggtccacaggccggatcgcc
cacatccccctctacttcgtcaacgctcagttcccgcgcttcagcccagtgctcggcagg
gcccaggagccccccgctggaggcggacgcgccgttcacgacgtggccctctttacggag
acctccccaacctctgccccttgggaccctctcccggggccgccacctgctcggacccac
tcccctcaactccacctgtaa
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