Oryctolagus cuniculus (rabbit): 100358114
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Entry
100358114 CDS
T03373
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100358114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100358114
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100358114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100358114
NCBI-ProteinID:
XP_051678584
Ensembl:
ENSOCUG00000010822
LinkDB
All DBs
Position
17:complement(42566859..42619699)
Genome browser
AA seq
2590 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGSGDVGN
PSASDLVPPPEETTPTDLPKESAAPAPESLTLHDYTTQPASQEQPAQPVLQTSTPTSGLL
QVSKSQEILSQGNPFMGVSATAVPSSTTGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTTQPLVAGTANGGKVTFTKVLTGTPLRQGVSIVSGNTVLAAKVPGNQAAVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPQQPPATQPLTLSSVQQAQIMGPGQSPGQRLSVPLKMVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPANSAPHTGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKSTGERLKEEKPKKSKTSGASKTKGKSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPIKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSR
HPELKRMNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHAY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSVFDVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWIR
KYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFP
VVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHR
VLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQ
PGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARRE
KQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAM
CRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALC
QPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAP
APSLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKSPEETAAQVPSLESLTLKLEHEVVAR
SRPTPQDYEVRVAPSDTTPLVSRNIPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSS
STDESEDEKEEKLTADHSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRAS
EWPKDRVLINRIDLICQAVLSGKWPSSRRNQEMITGGILGPANHLLESPSLTPGEYGDSP
VPTPRSSSAASMAEEEASAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMA
NGVIGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAP
RRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKADLNCLGMEPIQTANSRNG
KKGHHAETVFNRVLPGPIAPESSKKRARRTRPDLSKMMALMQGGGTGSLSLHNTFQHSSG
GLQSVSSLGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLR
ATGYPSSPATTTSGTALRLPSLQPEEDDDDEDEEDDDDLSQGYDSSERDFSLIDDPMMPA
NSDSSEDADD
NT seq
7773 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagctttaaccaggtcacccaagaccccattgaggaagcacttggactgcca
agctctctggactccttggaccagatgaaccaggatggtggaagtggtgatgtggggaat
ccatcagcaagtgacctggtccccccaccagaggaaacaacccccacagaccttcccaaa
gaatccgcagctccagctcctgaatctttaaccttgcatgattataccactcagcccgcc
agccaggagcagccagcccaacctgtcttacagacatcgacgccaacgtcgggacttttg
caggtctccaagagccaggagatcctgagccaggggaatcctttcatgggtgtctctgct
acagctgttccctctagtaccactggaggacagccacctcagtcagcccctaagattgtt
attcttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacaactcagcccttggtggctggcacagccaatggtggaaaagtc
acttttaccaaagtgctaactggcacaccccttcgacaaggtgtctccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctgctgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctccagccagtgaagggttcagctcctgctgga
aaccctggggccacagggccccctctgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaa
ggacatcggcatgttgtgctagggagcctaccaggcaagatagtattacagggcaaccag
ttggcagccctaactcaagccaagaatgcccaggggcagccagccaaagtagtaactatc
cagctgcaggtgcaacagccacagcaaaaaatccagattgtaccacaacctccatcttcg
caaccacagccccaacagccacctgcaacccagccactgactctgtcctctgtgcagcag
gctcagatcatgggaccaggacaaagtccaggacaaagactttcagtgccactcaagatg
gtgctgcagccacaggctggctcttcccaaggggcctcttctgggctctctgtagttaaa
gttctaagtgccagtgaagtggcagctctgtcatcaccagcaaactctgctcctcacacg
ggaaagacaggaatggaggaaaaccgaaggttggagcaccagaagaagcaagagaaagca
aatcggattgtagcagaggccatcgctagggctcgtgcccggggtgagcagaacatacct
cgtgtcctgaatgaggacgagttgcccagtgttcgacctgaggaggaaggtgagaagaaa
cgtaggaagaagagcactggggagaggctgaaggaagaaaagccaaagaaaagcaaaaca
tctggagcctccaaaacaaagggcaagagtaaactcaacaccatcactcctgtagtgggt
aagaagagaaaacgtaatacctcatctgataattcagatgtggaagtcatgcctgcacaa
tcaccccgggaagatgaagaaagcagcattcagaagagacgctccaatcgccaagttaag
cgaaaaaaatacactgaggacctagatataaaaatcacagatgatgaagaagaagaagag
gtagatgtaactggtccaataaaacctgagcctatcctccctgaacctgtgcaagaacca
gatggggagactttgccttccatgcagttctttgtggagaatcccagtgaagaagatgca
gccattgtagacaaagtgctttctatgcgggttgtgaagaaagagcttccttctggacaa
tacactgaagctgaagaattctttgtcaagtacaagaactactcctatctgcactgtgaa
tgggccacgatctcccagctagagaaagataagaggattcatcagaaactaaaacgcttc
aaaaccaaaatggcacagatgagacacttcttccatgaggatgaagagccctttaatcca
gactacgtagaggtggataggatattagatgagtctcacagtattgacaaggacaatgga
gagcctgtaatttactacttggtgaaatggtgctctctgccctatgaggatagtacatgg
gagctaaaagaggatgttgatgagggcaagattagagaatttaagcggatccagtcaagg
cacccagaactcaaaagaatgaatcgccctcaggcgagtgcctggaagaagttggagcta
tcacatgaatataaaaacagaaaccagttacgggaatatcagttggaaggggtcaattgg
ctgctttttaactggtataacaggcagaactgcatcctggctgatgaaatgggactgggc
aaaactattcagtccattgccttcttgcaggaggtatataatgtgggcatccatggcccc
ttcttagtcattgcccctctgtcaacaatcactaactgggagcgagaatttaatacgtgg
acagagatgaacactattgtgtaccatggcagtctggccagccggcagatgattcagcag
tatgaaatgtactgcaaagattcacgggggcgtctcatcccgggtgcatacaaatttgat
gccctgatcaccacttttgagatgatcttgtcagactgtcctgagctccgtgagattgaa
tggcgttgtgtcatcattgatgaggcccatcgactgaagaaccgtaattgcaagctgctt
gatagtctcaagcacatggacctggaacacaaagtgttactcacaggaacaccactgcag
aatactgtggaggaactgtttagtttacttcatttcttggaaccttcacagtttccttca
gaatcagaattcctcaaggactttggggatctcaagacagaagaacaggttcaaaagcta
caggccattctcaagccaatgatgctgagaaggcttaaagaagatgttgaaaaaaacttg
gcacccaaacaggaaactattattgaagtagagctgactaatatccagaagaaatactat
agggctattttggagaagaatttctccttcttgtccaaaggagcaggtcacaccaacatg
ccaaatcttctcaacacaatgatggagttgcgaaagtgctgcaaccacccgtatctcatc
aatggtgcagaagaaaaaatcctaactgaatttcgggaagcttgccatattatacctcat
gacttccatctgcaggccatggttcgttcagctggcaagttggttcttattgacaagcta
cttccaaaacttaaagctggtggccataaagtgctgatcttctcccagatggtacgctgc
ttagatatcttagaggattatctaatccagagaaggtacttatatgaacgtattgatggg
agggttagaggcaacctccgacaggctgctattgaccgcttcagcaagcctgactcagac
cgctttgtcttcttgttgtgcacccgtgctggtggacttggtattaatcttactgctgct
gatacatgcatcatttttgattcagactggaatccacaaaatgacctccaggcccaagca
cgatgtcatagaattggacagagcaaagctgtaaaagtataccgtctcatcactcgtaat
tcctatgagagagagatgtttgataaggctagcctcaagttgggattggataaggctgta
cttcaatccatgagtggtcgggatggcaacattactggaatccaacaattctccaagaag
gaaattgaagatctcttaagaaaaggagcatatgcagcaataatggaagaagatgatgag
ggctccaagttttgtgaagaagacattgaccaaatcttgttaagacgaactacaactatc
accattgaatctgaaggaaaaggttctacctttgccaaggcaagctttgttgcttctgaa
aatagaacagacatttctctggatgaccccaacttttggcaaaagtgggccaaaaaggct
gacctagacatggatctgctgaatagcaagaacaatttggtgattgacacacctagagta
cgaaaacagacccgccactttagcacgctgaaagatgacgacctagtagagttctctgat
ttggaaagtgaggatgatgagcggccacgctcccgaagacatgaccggcatcatgcctat
gggcgcactgactgctttcgggtggaaaaacacctgctggtatatggttggggacgatgg
cgagatattttgtctcatggacgctttaagcgacgtatgactgaacgagatgtggagaca
atttgccgggccatccttgtctactgtcttctacactaccgtggggatgaaaatatcaaa
ggcttcatttgggacttgattagccccgctgagaatggcaaaaccaaagaattgcaaaat
cattcagtctttgatgtctcccctttcccaggtctatctatccctgtgccccgtggacgc
aaagggaaaaaagtaaagtcacaaagtacttttgatatccataaggcagactggatccga
aagtataaccctgacactttgttccaagatgagagttacaagaagcacttgaaacatcag
tgtaacaaggtactgttgagggtacgaatgctatactacctgaggcaagaggttattgga
gaccaagcagagaaggtgttagggggtgccattgccagtgagattgacatatggttcccg
gtagtggatcagctggaagttccaacaacatggtgggacagtgaggctgataaatccctc
ctcattggagtctttaagcatggctatgagaaatacaatactatgagggcagatccagcc
ttatgcttcctagaaaaggctggccggccagatgataaagccattgcagcagaacatcga
gtgttggataatttctctgacatagtagaaggggttgactttgataaggattgtgaggat
cctgaatataaaccactccagggtccaccgaaggaccaagatgatgagggtgatcccttg
atgatgatggatgaggagatctcagtgattgatggagatgaagcccaggtgacccaacag
ccaggccatctattctggcctccaggctctgccctaacagctaggctccggcgccttgta
acagcctatcagcgcagctacaagagagaacagatgaagatagaggctgcagaacgtggg
gatcggcgacggcggcgttgtgaagcagccttcaagctaaaagaaattgcacgacgtgag
aaacaacaacgatggacaaggcgtgaacaaacggatttctatcgagtagtgtctaccttt
ggtgtggaatatgaccctgacaccatgcagttccattgggatcgcttccgcacttttgcc
cgactagacaaaaaaacagatgaaagccttaccaagtatttccatggctttgtggccatg
tgccgccaagtgtgccgcctgcccccagcagctggagatgaacccccagaccctaatctg
ttcattgagcccatcactgaggagagggcctcacggactctttaccgtattgaattgctt
cgacgcttaagggaacaagttctgtgtcaccctcttttggaagatcggctggcattgtgt
cagcccccaggtcctgaattgcccaaatggtgggagcctgttcggcatgatggggagcta
ctacgaggggcagcccgccatggggtgagccaaacagactgcaacatcatgcaggaccca
gacttctcttttctggctgcccgtatgaattacatgcagaaccatcaggcaggagcacca
gctccatccctgtcacgctgctctactccactgctacaccagcagtatacctcacgcact
gcctcaccgttgcccctgcgcccagatgctcctgtcgaaaagtcacctgaggagacagct
gcccaggtccccagtctggagagtctgactttaaagctagaacatgaggtggtggccagg
agccgaccaaccccacaagactatgaggtgcgagtggccccctctgatactacccctttg
gtttcccggaatattccgccagtcaaactggaggatgaggatgattcagactctgagctg
gacttgagcaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagctcc
agcactgatgagagtgaggacgagaaggaagagaagctaactgcggaccattcccgctca
aagctctatgatgaagagagtctcctgtctcttactatgtcccaagatggattcccaaat
gaagatggtgaacaaatgactcctgagcttttgctgctgcaggaaagacaaagagcttct
gagtggcccaaggatcgtgtcctgataaaccgtattgacctcatctgccaggctgtactc
tcagggaagtggccttctagccgcaggaaccaggaaatgatcacaggaggaattttgggg
ccagccaaccacttgctagagagtccctcattgacccctggagaatatggtgattctcca
gtccccacaccacggagcagcagtgcagcttccatggctgaggaggaagcatctgcagta
accacagcagcagcccaattcaccaaacttcgccgaggcatggatgagaaggagtttacg
gttcagatcaaagatgaggaaggattaaagttaacattccagaagcacaagttgatggct
aatggagtaataggagatggacatccactctttcataagaagaaggggaacagaaagaag
ttagtggagctggaggtggagtgcatggaagagcctaatcaccttgatgtggacctggag
acccggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggatgcccct
cgccgggctgaactggagatgtggttacagggtcatccagagtttgctgttgatccccga
tttctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaataat
aaagctgacttgaactgtttgggaatggaaccaatacagacagctaactctaggaatggc
aaaaagggtcaccatgctgaaactgtgttcaaccgggttttgccagggcctattgcacca
gagagcagcaagaagcgggcccgcaggacgcgaccagacctttctaagatgatggccctg
atgcagggaggaggcactgggtccttatctctacataacaccttccaacacagcagtggt
ggcctacagtctgtgtcatctctgggtcacagcagtgccacttctgcatctttgcctttt
atgccatttgtgatgggtggtgcagcatcatcccctcatgtagactccagcaccatgctt
catcaccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcttgaga
gccactggctacccctcttcaccagcgactaccacctctggtactgccttgcggttgcca
tcactgcaacctgaggaggatgacgacgacgaggatgaggaagatgatgatgatttatct
cagggctatgatagctcagaaagggacttctcactcattgatgaccctatgatgccagcc
aactcagactccagtgaagatgctgatgactga
DBGET
integrated database retrieval system
