Oryctolagus cuniculus (rabbit): 100358505
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Entry
100358505 CDS
T03373
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100358505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
HTH_32
HTH_48
Rad26-like_N
PC4
Motif
Other DBs
NCBI-GeneID:
100358505
NCBI-ProteinID:
XP_008252991
Ensembl:
ENSOCUG00000017908
LinkDB
All DBs
Position
2:complement(169652481..169747197)
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AA seq
1248 aa
AA seq
DB search
MNSAKIEARTNIKFMVKLGWKNGEIIDALRKVYGDSAPKKSAVYKWITRFKKGRDNVEDE
ARSGRPSTSICEEKISLVRALIEEDRRLTAEAIANTIDISTGSAYTILTEKLKLSKLSAP
WVPKVLHPDQLQTRAELSMEVLNKWDQDPDAILRRIETGGRTWLYQYNPVCKAHSKQWLP
RDGIGPVKAKVDRSRTKLLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQP
IMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRD
AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQ
ASPTEVVERLGPSTNPPEGLGPLPNPTTNKPLVEDFSNPETQNLDAMEQVGLDSLQFDYP
GNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSA
GLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQ
QAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPSQGQQGQQAESLAAAAAANPTLA
FGQSLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGTPVRLMAPTPVLISSAAAQAAA
AAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQQQPSTNLQSNSFYGSNSLTNSSQSSSL
FSHGPGQPGSTSLGFGSSSSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRS
SSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNG
SGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNR
FPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNY
VIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELD
GHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCT
AEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA
SNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRK
IIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgctaaaattgaagcacgaacaaacatcaagtttatggtgaagcttgggtgg
aagaacggtgaaattattgatgctttacgaaaggtttatggggacagtgccccaaagaaa
tcagcagtttacaaatggataactcgttttaagaaagggcgagacaatgttgaagatgaa
gcccgcagcggcagaccttccacatcaatttgtgaggaaaaaattagtcttgttcgtgcc
ctaattgaggaggaccgaagattaacggcagaagcaatagccaataccattgacatctca
actggttcagcttacacaattttgactgaaaaattaaagttgagcaaactttctgccccc
tgggtcccaaaagtattgcacccagatcagctgcagacaagagcagagctttcaatggaa
gttttaaataagtgggatcaagatcctgatgcaattcttcgaagaattgaaacgggaggt
cgaacctggctttaccagtacaatcctgtatgcaaagcacattcaaagcagtggttacca
agagatgggattggtccagtcaaagcaaaagtggaccggtcaagaacaaagcttttgcca
accaaaaagttttgggaacctgatgattcaacaaaagatggacaaaaaggcatatttctt
ggggatgatgaatggagagagactgcatggggaacttctcaccattcaatgtcccagcct
attatggtacagagaagatctggacagggttttcatggaaacagtgaagtaaatgcaata
ctgtctccgcgatcagaaagtggaggccttggtgtgagcatggtagaatatgtattaagt
tcttctcctgctgataaattggattctcgatttaggaagggaacttttggcactagagat
gctgaaacagatggacctgagaaaggagatcaaaaaggcaaggcttctccatttgaggag
gaccaaaacagagatcttaaacaaggagatgatgatgattctaaaataaatggcagaggt
ttgccaaatggaatggatgctgattgcaaagattttaatcgtactcctggaagtcgtcaa
gcctctccaactgaagtagttgagcgcctaggccccagtactaatcctccagagggattg
gggcctcttcctaatcctacaactaataaaccacttgttgaagacttttctaatcctgaa
actcagaatctggatgccatggaacaagttggtctggattccttacagtttgactatcct
ggtaatcaggtaccaatggactcttcaggagctactgtgggcctttttgactacaattcc
caacagcagctctttcagaggactaatgcactcacagttcagcagttgactgcagctcag
cagcagcagtatgcgttagcagcagctcagcagccccacatagctggagtattctcagca
ggccttgctccagctgcatttgtgccaaatccatatattattagtgctgctcctccagga
actgatccatatactgcagcaggattggctgcagcagcaacattagcaggtccagcagtg
gttccacctcagtattatggtgttccgtggggggtgtatccagccaacttatttcagcaa
caagctgcagctgcggcaaacaacacagccagtcagcaagcagcatcacaggctcagcct
ggacagcagcaggttctccgtgctggagcaggtcaacgtcctcttactcccagtcagggt
cagcaagggcagcaagcagaatcacttgcagcagctgcagcagcaaatccaactctggct
tttggtcagagtcttgctacgggcatgccaggctatcaagtactagctccaactgcctat
tatgatcagactggtgccttagtggttggccctggagcaagaactggccttggaactcca
gttcgattaatggctccaacacctgttttaattagttcagcagcagcacaagctgcagca
gcagcagcagcagctggaggaactgcaaatagtcttacaggcagcacaaatggtctgttt
cggccaattggcactcagccaccgcagcagcagcagcagcagcagccaagcactaatctg
cagtctaattcattctatgggagcaattctttaactaacagctcccagagcagttcttta
ttctctcatggacctggtcaacctggaagtacatcgcttggctttggaagcagtagctct
ttgggtgctgctataggctcagccctcagcggatttggttcttcagttggcagttctgca
agtagtagtgccacaaggagagagtctctatctactagctctgacttgtacaaaagatct
agtagcagcctagcacccatagggcaaccattttacaatagtctgggattttcctcctct
ccaagtccaataggcatgcctctgccaagccaaactccaggacattcacttacgccaccg
ccatcactttcatcacatggatcctcatccagtttgcatttaggaggactgacaaatggt
agtggtcgctatatctctgcagcacctggagcagaagcaaaataccgaagtgcttcaagc
acttccagtctcttcagctccagcagccagctcttccctccttctcggcttcgatataac
aggtctgacattatgccttcgggccgcagtagattactcgaagatttcagaaacaaccgc
ttcccaaaccttcagcttagagacttgattggacatattgttgagttttctcaagaccag
catggttctagatttatacagcaaaagctagagagagctactccagctgagcgacaaatg
gtatttaatgaaattctacaggcagcctatcaattaatgacagatgtttttggaaactat
gttatacagaaattttttgagtttgggagtttggatcaaaagttagccctggctactcgt
attcgtggtcatgttctgccccttgccctgcagatgtatggctgccgtgttattcaaaaa
gcattagaatctatttcttctgaccagcaggtaattagtgaaatggtaaaggagctagat
ggtcatgtactcaagtgtgtgaaagatcagaatgggaaccatgttgtacaaaaatgtatt
gaatgtgttcagccacagtctctacagtttatcattgatgctttcaaaggacaagtattt
gtgctttcaactcatccttatggctgcagagtgattcagcgcatcctagagcattgcaca
gcagaacagaccttacctatcttagaagagctccaccaacacacagaacagttggtacag
gatcagtatggcaattatgttattcagcatgtactggaacatggtcgacctgaagacaag
agcaaaattgtttctgaaatcagagggaaggtcttagccctgagtcaacacaaatttgcc
agcaacgtagttgaaaagtgtgttacgcacgcctcccgtgctgagagggctttgctgatt
gatgaggtttgctgccagagtgatggtccccacagtgccttatacaccatgatgaaggac
cagtatgccaattatgtggtccagaagatgattgatatggctgaacctgctcagagaaag
ataatcatgcacaagattcgacctcacatcactactttgcgcaaatacacgtacgggaag
catatactggccaagttggaaaaatactatttgaaaaatagcccagatctagggcctatt
ggaggaccaccaaatggaatgctataa
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integrated database retrieval system