KEGG   Oryctolagus cuniculus (rabbit): 103345666
Entry
103345666         CDS       T03373                                 
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
ocu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103345666
  09122 Translation
   03013 Nucleocytoplasmic transport
    103345666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    103345666
   03041 Spliceosome [BR:ocu03041]
    103345666
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103345666
Spliceosome [BR:ocu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103345666
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML WD40_Gbeta NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 WDR54 EIF3I Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 103345666
NCBI-ProteinID: XP_051692276
LinkDB
Position
Unknown
AA seq 341 aa
MERAVPLAVPLGQMEVFQALQRLHMTVFSQSISPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVLTFQAHEGPVYSMVSTDRQLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENALILAGGDCQLHTMDLETGSFTRALRGHTDYVHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTVEVYKHEECARPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPVRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgggctgtgccgctcgcggtgcctctgggtcagatggaggtgttccaggccctg
cagcggctgcacatgaccgtcttctcccagagcatctccccctgtgggaagttcctggcg
gccggcaacaactacgggcagatcgccatcttcagcttgtcggccgccttgagctcagaa
gccaaagaagaaagtaagaagccggtgctgaccttccaagctcatgaggggcccgtctac
agcatggtctccaccgatcgccagctgctcagtgcgggggatggggaggtgaaggcctgg
ctctgggcagagatcctcaagaagggctgcaaggagctgtggcgccgtcaacccccgtac
aggaccagcctggaagtgccggagatcaacgcgctgctgctggtgcccaaggagaatgcc
ctcatcctggccggaggggactgtcagctgcacaccatggacctggagaccgggagcttc
acccgggccctgcggggccacacggactacgtccactgcctggcgctgcgggagcggagc
cccgaggtgctgtccggcggcgaggatggggctgtgcggctttgggacctgcgcacggcc
aaggaggtgcagacggtggaggtgtacaagcatgaggagtgtgccaggccccacaatggg
cgctggatcggatgcttggccacggactcagactggatggtgtgcggagggggcccagcc
ctcaccctgtggcacctgcggtcctccacgcccactaccgtcttccccgtgcgggcacca
cagaagcacgtgactttctaccaggacctgattctgtccgcaggccagggccgctgcgtc
aaccagtggcagctgagcggggagctcaaggcccaagtgcctggctcttccccagggctg
ctcagcctcagcttgaaccagcagccagcggcccccgagtgcaaggttctgactgcggcc
ggcaacagctgccgggtggacgtcttcaccaacttgggctaccgggccttctccctgtcc
ttttga

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