Oryctolagus cuniculus (rabbit): 103348023
Help
Entry
103348023 CDS
T03373
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103348023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
103348023
Transcription factors [BR:
ocu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103348023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
103348023
NCBI-ProteinID:
XP_008253755
LinkDB
All DBs
Position
3:69693250..69695486
Genome browser
AA seq
309 aa
AA seq
DB search
MSSPDAGYASDDQSQPRSALPAVMAGLGPCPWAESLSPLGDVKVKGEAAASSGTTAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQATAMGPEAGRVAMDGLG
LPFPEQGFPAGPPLLPPQCRASWRPPAPCTCTTAPWARPRWAAGAASRCSRRRSNISSRR
RSSSTHSTRTRRDPGSRRPLPRRCPAGMERTPASPPSFSGKWTARSLNSTCTSCASPTWG
SPTRHMTPV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtccggacgcgggatacgccagtgacgatcagagccagccccggagcgcgctg
cccgcggtgatggccggactgggcccctgcccctgggccgagtcgctgagtcccctcggg
gacgtgaaggtgaagggcgaggcggcagcgagcagcggaacgacggccggggccgcgggc
cgagccaagggagagtcccgcatccggcgaccaatgaatgccttcatggtgtgggcaaaa
gacgagcgcaagcggctggcgcaacagaacccggacctgcacaacgctgagctgagcaag
atgctaggcaagtcgtggaaggcgctgacgctggcggaaaagcggcccttcgtggaggag
gccgagcggctgcgcgttcagcacatgcaggaccaccccaactacaagtaccggccgcgg
cgccgcaagcaggtgaagcggctgaagcgggtggagggaggcttcctgcacggcctcgcc
gagccgcaggccaccgcgatgggccccgaggccggtcgcgtggccatggacggcctgggc
ctaccattcccggagcagggcttccccgccggcccgccgctgctgcccccgcaatgcagg
gcctcctggcgccccccagcgccctgcacatgtactacggcgccatgggctcgccctcgg
tgggcggcgggcgcagcttccagatgcagccgccgccgcagcaacatcagcagccgccgc
cgcagcagcagcacccacagcacccgcacccgccgggacccgggcagccgtcgccccctc
ccgaggcgctgcccagcagggatggagcggaccccagccagcccgccgagcttctcgggg
aagtggaccgcacggagtttgaacagtacctgcacttcgtgtgcaagcccgacatggggc
tcccctaccagacacatgactccagtgtga
DBGET
integrated database retrieval system