Ochotona curzoniae (black-lipped pika): 121144648
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Entry
121144648 CDS
T11174
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04151
PI3K-Akt signaling pathway
ocz04510
Focal adhesion
ocz04512
ECM-receptor interaction
ocz04518
Integrin signaling
ocz04820
Cytoskeleton in muscle cells
ocz04974
Protein digestion and absorption
ocz05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121144648 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121144648 (COL6A6)
04518 Integrin signaling
121144648 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121144648 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121144648 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121144648 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
121144648 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocz04147
]
121144648 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
ocz00536
]
121144648 (COL6A6)
Exosome [BR:
ocz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121144648 (COL6A6)
Glycosaminoglycan binding proteins [BR:
ocz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121144648 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
121144648 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Radical_SAM
Ku_N
Motif
Other DBs
NCBI-GeneID:
121144648
NCBI-ProteinID:
XP_040818933
LinkDB
All DBs
Position
Unknown
AA seq
2266 aa
AA seq
DB search
MLWILFLLIIYCHVSVNQNSGPQYADVVFLVDSSDHLGIKNFPSVKTFLNKMMASLPIEA
NKYRVALAQYSEQLHSEFQLGTFKGKGPMLNHIRNNFGFMGGSLRLGNALREAHQTYFSA
SAQGRDKKQFPPILVVLASATSEDDVEEAAEALRQDGVRIISVGVQRAAEDDLKAMATAG
FHFHLRTVRDLSTFSQNMTQAIRDAGQYRDAAMDDLIAEVCQGPSVADVVFLLDVAVNGS
QENLDYLKAFLEESLSALDIKENCMRVGLVAYTNDTEVLSALSQGTNRSVLLQHVEDLSP
RAGEAYTGAALQALRKEVFSARGGSRKNRGVPQILVLVTHRASEDNVTEAAVNLRRHGVT
VFTLGIQGASASQLEKIASHPAEHYFTKLPTFSDLAAHNQTFLKKLRNQITHTVTVLSER
TETLKSGCVETEEADIFLLIDGSESIQATEFQEIKTFLSEVVAMFNIAPHKVRVAAVQYA
DGWDLEFDIDKYSNKQDVGKAIENIRQLGGNASLGAALNFTLRLLEKAKKQRANKVPCHL
VVLTNGVSEDSILEPVRRLREQTVRVHAIGVKEANQTQLREIAGEDRRVYYVHDFDALKD
IRNQVVQEICAEEACKDLKADIMFLVDSSGSIGLENFGKMKTFMKNLVSKSQIGADRVQI
GVVQFSHTEKEEFQLDTFTSQSDISNAIDGMAHIGETTLTGHALTFVSQYFSPAKGARPG
VRKYLILITDGEAQDVVKGPAEALRQEGVIIYSVGVFGSNVTQLKEISGRPEMVFYVENF
DILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYNIMKEFMVGLVKKADV
GKSQVRFGALKYADNPEVLFELDDLSTKWEVISKLQNDQPMGGNTYTAKALEFSSHMFTE
AWGSRLHKGVPQVLIVITDGESHDSDKLNATAKALRDKGILILAVGIAGANHVELLAMAG
SSDKYYFVETFGGLKGIFANVSESVCTSSKVECEIEKVDLVFLLDGSNSIDPRDFKKMKE
FLTSVVQDFDVNLHRVQIGAAQFSDTYRPEFPLGMSSGVQEVSLQIANIQQIFGFTHIGD
ALRQVGDYFRADRGSRINTGTPQVLLVLTDGQSQDEVAQAAEELRHKGVDIYAVGIGQVD
DQQLIQITGTAEKKLTVDNFDELRKVKKRIVRNICTSGSETNCFVDVVVGFDVSTYQSGQ
TLFEGQPWMETYLQGILRTISSLNGVSCEVGTETRVSVAFQVTNALGKYSPKFEIYSDNI
LNSLKSITVQGPSLLNTDLLTSLWDAFQNKSAARGKVILLFSDGLDDDIEKLEQKSDELR
KEGLNALLTVALDGAVHSGDLADLLSVEFGKGFEYRTQLTTGMRDLGSRLSKYLVNVAEK
TCCCLFCKCIGEAGAVGEPGPPGKKGALGFKGSAGYLGEEGAAGERGAHGPVGEQGTEGC
QGAKGPKGIRGLDGQKGEDGESGIDGLTGEQGDNGLPGRKGEMGDNGIQGIPGRRGIPGD
RGAKGLHGDPGIPGIDNSIQGPKGLKGERGRQGRRGQLGAPGTPGSRITTVTHGQRGQAG
PQGVPGTPGPDGLEGSQGLRGAQGRRGETGVKGEKGDLGRKGPQGPPGPAGEAGNPGRMG
SQGNKGESGDVGPKGAVGFPGPRGLPGDIGSPGYGGVGSKGKKGQEGFPGESGPKGEMGD
PGSPGEMGPKGARGRTVSTGLPGEPGAPGEPGPPGRKGLKGTQGLAPFSVCELIQYVRDH
SPGGHGSPECPVHPTDLVFALDQSPGVTAQAFARMKEMASAVLRDLRVRTGGCAVGARVA
VLTYGGAGTQQLVRFSDALDQSQLLSSLQAIAHEAAASSGGGLGRAMRFISRHVFKRTLP
GTHTRRVATFFSAGPADPSDAQELTTAAMELGALDIIPVVIAFGAVPAVRRAFAIDDTGT
FQVVVVPPAADYTATLQRLQRCTFCYDVCKPDADCDQGSPAPVQSYIDAAFLLDGSRNSA
SAEFEDLRAFLGALLDHFEITTDPETSVTGDRVALLTHGPPDFLPNTQRSPVRAEFNLTT
YSSKRLMKRHVQESVQQLNGEAFVGHALQWTLDKVFLRTPHLRRNKVIFVISAGETSHLD
TEVLKEESMRAKCQGYALFVLSLGPAWNGDELEDLASRPLDQHLVQLGRIHKPDHKYGVK
FVKSFINSVRRAVNRYPPTNLKARCNRLSSAEPKTPPLRKSPSFVPGPHKPVLKEVVLQK
AKFFQNKKYLSRITRGGRDDAIQKSARNTSYNFQVGYKDIQTPPRR
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggattttgttcttgctcataatttactgccatgtgtccgtgaatcaaaattct
ggccctcagtatgcagacgtggtgttcctggtggacagctccgaccacctgggcattaaa
aacttcccctccgtgaaaaccttcctgaacaaaatgatggccagcctccccatcgaggcc
aacaagtaccgcgtggcgctggcccagtacagcgagcagctccacagcgagttccagctg
ggcacgttcaagggcaagggccccatgctcaatcacatcaggaataacttcggcttcatg
ggcggctccctgcgcctcgggaacgcactcagggaggcgcaccagacctacttctccgcc
tctgctcagggccgggacaagaagcagttcccacccattctggtggtgctggcttctgcc
acatctgaggatgacgtagaagaggcggcagaggccctgcgccaagacggggtgcgaatc
atctccgtgggggtgcagagagctgcggaggacgacctgaaggccatggccacggctggg
ttccacttccaccttcggacagtcagagacctgagcacgttctctcagaacatgacgcaa
gccatcagggacgcagggcagtacagggatgcggccatggatgacctcattgccgaagtc
tgccaaggcccctccgtggctgacgtcgtgttcctgttagatgtggcagtcaacggcagc
caggagaacttggactatcttaaggcgttcctggaagaaagtctctctgcccttgacata
aaggagaactgcatgcgagtgggccttgtggcctacaccaatgacacggaggtcctcagc
gctctgagccagggcaccaatagatcagtgcttctccagcacgtggaagatctcagcccc
cgggctggagaggcttacaccggtgctgccctccaagcgctcaggaaggaggtcttcagt
gcccgaggcggcagccggaagaaccggggtgtgccccagatcttggtgctggtcactcac
agggcttcggaggacaacgtgaccgaggcagctgtgaacctccggcgccacggagtgaca
gtgttcactttgggcatacagggggccagtgccagccagttggaaaagatagcatctcac
cctgctgagcactacttcaccaagctgccaaccttctcggacctggccgcccataatcag
acatttttgaaaaagctgcggaaccagataacccacacggtcactgtcctttccgaacgg
accgaaaccctcaaatccggctgtgtggagacggaggaagcagacatctttctgctcatt
gatggctcagagagcatccaggccacagagttccaggaaataaagaccttcctgtcagag
gtggtggccatgttcaacattgccccccacaaagtgcgggtcgcggctgtgcagtacgcc
gacggctgggacttggaatttgacatcgataagtactccaacaagcaggatgtgggaaag
gccattgagaacatcaggcagctgggtgggaacgcaagcttgggggcagcgctgaatttc
acactgaggctgttggagaaggcaaagaagcaacgagcaaacaaagtgccgtgtcacctg
gttgtcctgacaaatggcgtgtctgaggacagcatcttggagcctgtgagaagactgaga
gagcagactgtccgtgtccatgctattggggtcaaggaggccaatcagacacagctgcga
gagattgcgggcgaggataggagagtatattatgtgcatgactttgatgccttaaaagac
ataagaaatcaagttgttcaggaaatctgtgctgaagaagcctgcaaagacttgaaagcc
gacatcatgtttctggtggacagttcgggaagcataggactcgagaactttggcaaaatg
aaaacatttatgaaaaacctggtgagcaaatctcagattggggcagatcgtgtacagatt
ggagttgtccaattcagccacaccgagaaggaggagtttcagctcgacacgtttacatca
cagagtgacatctcaaatgcaatagatggaatggctcatattggcgagaccaccctgact
ggccacgccctaacctttgtgtctcagtacttcagccctgccaagggggcccggcccggc
gtcaggaaataccttatcctcatcacggatggcgaagcccaggatgtagtgaagggtcct
gcggaagcacttcggcaagaaggtgtgattatctactcggtgggagtgtttggttccaat
gtcacccagctcaaggagatcagtgggaggccagagatggttttttatgttgagaatttc
gacattctgcagcacatagaagatgacctggtttttggaatctgcagtccccgtgaagag
tgtaaacggatcgaagtgctggatgttgtatttgtcatcgatagctctggcagcattgac
catgatgaatacaacattatgaaggaattcatggttggcttagtgaagaaggctgatgtc
ggcaaatcacaggtccgctttggggctctgaagtatgctgacaacccagaggtgctgttt
gaactggatgacttaagcaccaagtgggaggtgatttccaagctgcagaacgaccagccc
atggggggcaatacctacactgccaaggcactggagttctcaagccacatgttcactgag
gcctggggcagccgcctgcacaaaggggtgccccaggtcctcattgtgatcactgacggg
gaatcccacgatagtgataaactcaatgccaccgcgaaggccttgcgcgacaagggcatc
ctcatcctggctgtgggcattgctggcgccaaccacgtggagctgttggccatggcgggt
tcaagtgacaagtactacttcgtggagacttttggaggcctgaaggggatatttgccaat
gtgtcggagagtgtctgtacctcttcgaaagtagagtgcgaaattgaaaaagtagatctt
gttttcctcctggatggttccaacagcattgacccaagagacttcaagaagatgaaggaa
tttttgacgtctgtcgttcaagactttgatgtgaacctgcacagagtgcagatcggagca
gcccagttcagcgacacctaccggcccgagtttccactgggaatgtcctcaggcgtccag
gaggtgtcgcttcagatcgcaaacattcaacagatctttgggttcacacacattggcgat
gccctccgccaggtgggagattacttccgggcagacaggggcagcaggatcaacacagga
actccacaggtgttgctggtcctcacggatggccagtcccaggatgaggtggcccaggct
gccgaggagctgagacacaagggcgtggacatctacgccgtgggcattggccaggtggac
gatcagcagctcatccagatcactggcactgcagagaagaagctcacagtggataacttc
gatgaactgagaaaggtcaagaaaaggattgttcgcaacatttgtacctcggggagtgag
actaattgttttgtggatgttgtggtgggatttgatgtctcaacttatcagagtggacag
actttgtttgaaggccagccgtggatggaaacctaccttcaaggcattttacgaaccatc
agctccctcaatggagtaagctgtgaagtgggcacagagacacgagttagtgtggctttt
caagtgacaaatgccctggggaaatactctcccaagtttgagatctacagtgacaacatc
ctgaacagcttgaagagtataacagttcaaggcccttcactgctcaacacagacctcttg
acgtctctctgggatgcgtttcagaataaatccgctgcccgaggaaaggtgatccttttg
ttttcagatggattggatgatgacattgagaaacttgagcaaaagtctgatgaactcaga
aaagaaggcctgaatgccctcctaaccgtggctttggacggagctgtccactcgggtgac
ctggccgatcttctctccgtggagtttgggaagggatttgagtacaggacacagctcacc
actggcatgagggaccttgggagccggctgtccaagtacctggtcaatgttgccgagaag
acgtgctgctgtctgttctgcaagtgcattggagaagctggcgccgtgggcgagcctggc
cccccggggaaaaagggcgccttgggttttaagggcagtgccggctacctgggagaagag
ggtgctgcaggagaaagaggagctcatgggccagtgggggagcaagggactgaaggatgt
cagggtgccaaaggtcccaagggaatcagaggactggatggacagaagggagaagatggg
gaaagtggaattgatggattgactggagaacagggagataatggtcttcctggaagaaaa
ggagaaatgggtgacaatgggatccagggcatccctggaaggagaggcattcctggtgac
cgcggagccaagggcctgcatggagatcctggaattcctggaattgataatagcatacaa
ggacccaagggcttgaaaggagaacgtggaagacaaggcaggcgaggccagctgggcgcc
cctggaactccaggctccagaataacgacggtgactcatggccaaaggggacaagcaggg
ccacagggagtaccaggcacccccggcccggacggactggaaggctcccagggactcaga
ggcgctcagggccgaagaggagagactggtgtgaaaggagaaaaaggagatctgggaaga
aaaggtccccaggggcctccaggacctgcaggagaagcagggaatccaggccgtatggga
agccaaggcaataaaggagaatctggagatgtggggccaaaaggagctgttggctttcct
ggtcctcggggcttgccgggtgacatcggcagtcctggctacggtggtgtgggcagtaaa
gggaaaaaggggcaagaaggattccctggagagagtggacctaagggtgagatgggggac
cctggtagcccaggagagatgggacccaagggagccagaggcagaacggtgtctactggg
ctgccaggagagcccggggcacctggggagccagggcctccaggacgcaagggtttgaaa
ggcacccaaggcttggcgcccttctcagtgtgtgagctcatccagtatgtgcgggaccac
agtcctggcggacacggaagccccgagtgccctgtgcaccccacggacttggtgttcgcg
ctggaccagtcaccgggcgtcaccgcacaggcattcgcacgcatgaaggagatggcgtca
gccgtgctgcgcgacctgcgtgtgcgcacaggcggctgcgcggtgggcgcacgcgtggcc
gtcctcacttacgggggcgcgggcacccagcagctggtgcgcttctcggatgcgctggac
cagagccagctcctcagctcgcttcaagccatcgctcacgaggcggcagcgtccagcggt
ggcgggctgggccgtgccatgaggttcatctccaggcacgtgttcaaacgcacactgcca
ggcacccacacgaggagggttgccaccttcttcagcgcgggcccggccgacccctcggac
gcgcaggagctcacgacggctgccatggagctgggcgcgctggacatcattcctgtggtg
atcgccttcggggcggtgccggccgtgcggcgggcattcgcgatcgatgacactggcacg
ttccaagtggtggtggttccccctgcagctgactacacagcaacattacagagactccag
cgatgcactttctgctatgatgtgtgcaagccagatgctgactgtgaccaaggcagccca
gcccctgtgcagtcttacatcgatgctgccttcctcctggatggctcccgcaactctgca
agtgctgaattcgaagatctcagagccttcctcggagcactcttagatcactttgaaatc
accacagaccctgagacctctgtcaccggagaccgggtggcgctgctgacccatgggccc
cccgacttcctccccaacactcagaggagtcccgtgagagctgagttcaacctgaccacc
tacagcagtaagcgcctcatgaagaggcatgtgcaagagtcagtgcagcaactcaacgga
gaggcgttcgttgggcacgccttgcagtggacgctggacaaagtctttttaaggacaccc
cacctgagaagaaacaaagtcatatttgtgatctctgctggggaaaccagtcacctggat
acagaagtcttaaaggaagaatccatgcgagccaagtgtcagggctatgccctgtttgtg
ctttcccttggccctgcttggaatggtgacgaactggaagacctggccagccgccctttg
gatcagcacttggtccagcttggccgcattcacaaacccgaccacaagtatggcgtgaag
tttgtgaagtcttttatcaactcggtcaggcgtgcagtcaacagataccccccaacaaat
ctcaaagccaggtgcaacagactgagctcggcagagccgaagacaccacccctacggaaa
tctccaagctttgttcctgggccacataaacctgtcctcaaagaagtcgtattacagaag
gcaaaattcttccaaaataaaaaatacctttcaagaattacaagaggtggcagggatgat
gccattcaaaaatctgccagaaatacatcctataattttcaagtcggatacaaggacata
caaactcctcccagacgataa
DBGET
integrated database retrieval system
