Ochotona curzoniae (black-lipped pika): 121150878
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Entry
121150878 CDS
T11174
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
121150878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocz04040
]
121150878
Ion channels [BR:
ocz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121150878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
121150878
NCBI-ProteinID:
XP_040827998
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYLNKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEVNITSLFNNSL
DGNGTIFNRTMNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGV
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKAEVVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRTKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRTSRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPTGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPNSRQRAMSIASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINFTTGEMFDVSV
VNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQIFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKSKEGDGTPIKEEILIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tccctcgctgctattgaacaacgcattgcagaagagaaagccaagagacccaagcaggag
cgcaaggatgaggatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaag
tctcttccatttatttatggagacattcctccagagatggtgtcagagcctctggaggac
ctggacccctactatcttaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcggttcagtgccacctctgccctgtacattctaactcccttcaaccctattagaaaa
ttagctataaagattttggtacattctttattcaatgtgctcattatgtgcactattttg
accaactgtgtgtttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttattaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggatccatggaattggctggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccatagtgggggcc
ttgatccagtcggtgaagaagctctctgacgtcatgatcctgaccgtgttctgtctgagc
gtgtttgctctaatagggctgcagctgttcatgggcaacctgaggaacaagtgtttgcag
tggcccccagataactcttcctttgaagtaaacatcacttctctctttaataactctctg
gatggaaatggcaccattttcaacaggacaatgaatatgtttaactgggatgagtatatt
gaggataaaagtcacttttactttttggaagggcaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgcccagaaggttacatctgtgtgaaggctggtaggaatccc
aactacggctacacaagctttgacacctttagttgggctttcttgtccttatttcgcctc
atgactcaagacttttgggaaaacctttatcaactgacgttacgtgctgctggaaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctacctaatcaatctgatc
ctggctgtggtggccatggcctatgaggaacagaatcaggccaccctggaagaggctgaa
cagaaagaagctgagtttcagcagatgcttgagcagttgaaaaagcagcaagaagaagct
caggcagcagctgcagcggcctccgctgaatccagggatttcagtggtgcgggcggggtt
ggcgttttctccgagagttcttcggtggcatcgaagttgagctccaagagcgagaaggag
ttgaaaaacagaaggaagaaaaagaagcagaaagaacagtccggagaagaagagaaggca
gaagtagtcagaaaatctgaatctgaggacagcataagaagaaagggtttccgcttttcc
ttagaaggaagtaggctgacatatgaaaagaggttttcttctccacaccagtcgttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggcaagccttttcagcttc
agagggagaacaaaggatattggctctgaaaatgactttgctgatgatgagcacagtact
tttgaggacaatgacagccgaagagactctctgtttgtgccacacaggcatggagaacga
cgtcacagcaatgtgagccaggctagccgcacctccagggtgctccccattctgcccatg
aatgggaagatgcatagtgctgtggattgcaatggagtggtatccctggttgggggacct
tctgcgctcacatctcccacaggacagctcctgccagagggcacaactactgaaacagaa
ataagaaagcgacggtccagttcttatcatgtttccatggatttgttggaagatcccaat
tcaaggcaaagagcaatgagtatagcgagtattttaaccaacaccatggaagaacttgaa
gaatcaagacagaaatgtccaccttgttggtataagtttgctaacatgtgcttgatttgg
gactgctgcaaaccatggctaaaagtgaagcatcttgtcaacttggtcgtgatggaccct
tttgttgacctggccatcaccatctgcattgtcttaaatactctcttcatggccatggag
cactatccaatgacagagcagttcagcagtgtattgtctgttggaaatctggtcttcact
gggatcttcactgcagaaatgtttctcaagatcattgccatggacccatattattacttt
caagaaggctggaatatttttgatggttttattgtgagccttagtttaatggaactcggt
ttagccaatgtggaagggttgtccgttcttcgatcatttcgtctgctcagagttttcaag
ttggcaaagtcctggcccacactaaatatgctgattaagatcattggcaattccgtgggg
gctctgggaaatctcaccttggtgttggccatcattgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatctccagtgattgtgaa
cttccccgctggcacatgcatgacttctttcactccttcctgatcgtgttccgtgtgctg
tgtggagagtggatagagaccatgtgggactgtatggaggtcgctggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtgatcggaaacctagtggttctgaacctgtttctg
gccttgctcttaagttccttcagctctgacaaccttgctgccactgatgatgataatgaa
atgaacaacctccagattgctgtgggaaggatgcagaaaggaattgattttgttaaaaga
aaaatacgtgaatttattcagaaagcttttgttagaaagcagaaagctctagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgcatttccaaccataccaccata
gaaataggcaaggatcttaactatctcaaagacggaaatggcactaccagtggcataggc
agcagcgtggagaagtatgtcgtggacgaaagtgattacatgtcatttataaacaacccc
agcctcacggtgacagtaccaattgctgttggggaatctgactttgaaaacttgaatact
gaagaattcagcagtgaatcagatatggaagaaagcaaagagaagctaaatgcaactagt
tcatcagaaggcagcactgtggatattggagctcccgccgagggagaacaacctgaagct
gaacctgaagaatcccttgaacctgaagcctgctttacagaagactgtgtacggaagttc
aagtgctgtcaaataagcatagaagaaggcaaagggaaactctggtggaacctgagaaaa
acttgctataagatagtggagcacaattggtttgaaaccttcattgtcttcatgattctg
ctcagcagtggggctctggcctttgaagatatttacattgaacagcgaaaaaccattaag
accatgttagaatatgctgacaaggtgttcacgtatatattcatcctagagatgctttta
aagtgggttgcgtatggttttcaaatgtattttaccaatgcctggtgctggttagacttc
cttattgttgatgtttcattggttagcttaactgccaatgctttgggttattcagaactt
ggtgccatcaaatccctcagaacactaagagctctgagaccattgagggccttatcccgc
tttgaaggaatgagggtggttgtaaatgctcttttaggagccatcccatccataatgaat
gtcctactggtctgtctgatcttttggctaatattcagtatcatgggagtgaatcttttc
gctggcaagttttaccactgcattaacttcaccacaggagagatgtttgatgtaagcgta
gtcaacaactacagtgaatgtcaagccctcatagaaagcaatcaaacagcaaggtggaaa
aacgtgaaagtgaactttgacaatgtgggacttgggtatctttccctgctccaagtagcc
acatttaaaggatggatggatatcatgtatgccgctgtcgactcacgaaatgtagaattg
caacccaagtatgaagacaatctgtatatgtatctttattttgtcatcttcatcattttt
ggttcattttttaccttgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaggacatttttatgacagaagaacagaagaaatattacaat
gcaatgaaaaaacttggttcgaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaaggcatggtcttcgattttgtcaccaagcaaatctttgacatcagcatcatgatt
ctcatctgcctcaacatggtcaccatgatggtggaaacagacgaccagagtcaagaaatg
acaaatattctgtactggattaatctggtgtttattgtgctgttcactggagaatgtgtg
ctaaagctaatttcccttcgctactattatttcacaattggatggaatatttttgatttt
gttgtggtcattctctccattgtaggtatgtttctcgctgagctgatagagaaatatttt
gtgtcacctaccctgttccgagtgatccgactggccaggattggccgaatcctacgtctg
atcaaaggagcaaaggggatccgtaccctgctctttgctttgatgatgtcccttcctgca
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctatgccatcttcgggatg
tccaactttgcctatgttaagagagaagtagggattgatgacatgttcaactttgagact
tttggcaatagcatgatctgcctgttccagataaccacctctgctggctgggatggactg
ctagcacctatcctcaatagtggcccacccgactgtgaccctgagaaagatcaccctggg
agctcagttaagggagactgcgggaacccatctgttggaatcttcttttttgtcagttac
atcatcatatccttcctggtggtggtgaacatgtacattgctgtcatcctggagaacttc
agtgttgctaccgaggaaagtgcagagcccctgagtgaggatgactttgagatgttctac
gaggtttgggagaagtttgacccagatgccacccagtttatagagttctccaagctctct
gattttgccgctgccctcgaccctcctcttctcatagcaaaaccaaacaaagtacagctc
attgccatggacctgcccatggtcagtggcgaccggatccactgcctggacattttgttt
gcttttacaaagcgtgttttaggtgagagtggagagatggacgcccttagaatacagatg
gaagaacgattcatggcctcaaatccttccaaggtctcttatgagcccatcacaaccact
ctgaaacgcaagcaagaggaggtgtctgctatcgttatccagagggcttacagacgctac
ctcttgaagcaaaaggttaaaaaggtttcatccatatataagaaagacaaaagcaaggaa
ggtgatgggacacctattaaagaagagatcctcattgacaaactaaatgagaattcaact
ccagagaaaaccgacgtgacaccatccaccacttctccgccgtcatacgatagtgtgaca
aaaccagaaaaggaaaaatttgaaaaagacaaatcagaaaaggaagacaaaggaaaagat
atcagggaaagtaaaaagtga
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integrated database retrieval system
