KEGG   Ochotona curzoniae (black-lipped pika): 121158343
Entry
121158343         CDS       T11174                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04151  PI3K-Akt signaling pathway
ocz04510  Focal adhesion
ocz04512  ECM-receptor interaction
ocz04820  Cytoskeleton in muscle cells
ocz04974  Protein digestion and absorption
ocz05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121158343 (COL9A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121158343 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121158343 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121158343 (COL9A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    121158343 (COL9A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    121158343 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ocz00535]
    121158343 (COL9A1)
Proteoglycans [BR:ocz00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   121158343 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 121158343
NCBI-ProteinID: XP_040838977
LinkDB
Position
Unknown
AA seq 920 aa
MKSCWTVPAFFFVCSFLGPWASAAVKRRPRFPVNSNSNGGGELCPKIRNGQDDLPGFDLI
SQFQIDKAASQRTIQRVEGSTTLQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLEKNWNIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTAAFSKLPSLFDSQW
HKVMIGVESSSATLFVDCIKIESLPIKPRSQINVDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPGRETCHELPVVTPSQTTKKRGPPGQPGPPGPPGPPGVPGIDGIDGDRGPKGPP
GPPGPVGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIPG
PPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRSG
YPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGVVGDKG
EKGARGLDGEPGPRGLPGAPGDQGQRGPPGEAGPKGDKGPQGSRGIPGPPGPKGDTGLPG
MDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGLPGAKGVAGEKGNTGAPGKPGQLG
NSGKPGPQGPPGEVGPRGPRGLPGSRGEVGPAGAPGLPGKLGSVGSPGLPGLPGPPGLPG
MKGDRGVVGETGPKGEQGASGEEGEAGERGELGDIGSPGPKGSVGNPGEPGLRGPEGSRG
LPGIEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRAIQEHFAEMAASL
KRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGLKGPPGALGLRGPKGDLGEKG
ERGLPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPGFC
EPASCTLQAGQRAFSKGPDQ
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgaagagctgctggacagttccagctttcttctttgtatgcagtttcctgggaccatgg
gcatctgcagctgtcaagcgtcggccaagattccctgtcaattcaaattctaatggtgga
ggtgaactgtgtccaaagatcaggaatggccaagatgacttacctgggtttgacctgatt
tctcagttccaaatagataaagcagcatctcaaagaactatccagagagtagagggatca
actacattacaagttgcttacaagttgggaaataatgtagatttcaggattccaaccagg
catttatatcccagtggactgcctgaagaatactcgtttctaactactttccggatgact
ggaagcacacttgaaaagaactggaacatttggcagattcaagattcctcggggaaggag
caagttggtgtgaagattaatggccaaacaaaatctgttgcattttcttataagggactt
gatggaagcctccaaacagcagctttttcaaaattgccctccttgttcgattcccagtgg
cacaaagtcatgattggtgtggaaagcagtagtgctactctctttgttgactgcatcaag
attgaatctttacctattaaaccgaggagccaaatcaatgtcgatggctttgctgtgctg
ggaaaacttgcagataatccccaagtttctgttccatttgaacttcagtggatgctgatt
cattgcgatcccctgcggcctgggagggaaacgtgccatgaactgccagtagtaacgcct
agccagaccactaagaagagaggtcctcctggccagccggggccacccgggcctccagga
ccccctggagttccaggcattgatggcattgatggtgaccgaggtccaaagggtccccca
ggtcctccgggtcctgtaggagaaccggggaaaccaggagctccaggcaagcctggcaca
ccaggagctgatggattaacaggacctgatggatctcctggctctgttggaccaagggga
caaaaaggagaacctggtgtgccgggatctcgtggatttccaggccgtggtattcctgga
cccccgggtcctcctgggacagcaggactccctggagaactcggccgagtaggacctgtt
ggtgatcctgggagaagaggaccacctggcccccctggacctccaggacccagtggaaca
attggctttcatgatggagatcctctgtgtcccaattcctgcccaccaggtcgctctgga
tatccaggcctaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaacca
ggaagacaaggacataagggtgaagaaggtgaccagggagagctgggggaagttggagct
caaggacctccaggagctcaaggtttgaggggcatcaccggtgttgttggggacaaaggt
gaaaaaggtgctcgtggcttggatggagaacctgggcctcggggtcttcctggtgcacct
ggtgaccaaggacagcgagggcctcctggagaagcaggtcccaagggagacaaaggacct
caaggttctagaggaattcctggtccccctggacccaaaggagacacgggcttgccaggc
atggatggccgtgatggaatacctggaatgcctggaacaaagggtgaaccagggaaacct
ggacctcctggtgatgctggtctgcaggggctaccaggtgtacctggacttcctggggca
aagggtgttgctggagaaaagggtaacacaggtgcaccaggaaagcctggccaactggga
aactcgggaaaaccaggcccacaaggacccccaggagaggtgggaccgcgaggacccagg
ggccttcctggcagtagaggagaagtaggaccagctggagccccaggtctaccaggtaaa
ttgggttctgttgggagccctggcctccctggcctgcctggacctcctggacttcctggc
atgaaaggtgacaggggtgtagttggagaaactggcccaaagggtgaacagggggcctct
ggtgaagaaggtgaagcaggagagaggggtgaattgggagacataggatcgcctggccca
aagggatctgtggggaatcctggagagcctggtttgagagggcccgaaggtagccggggg
cttcctggaattgaaggccccagaggaccgcctggcccccgaggtgtacagggagaacag
ggtgccactggcctgcccggcatccagggccctccgggtagagcaccgacagaccagcac
attaagcaggtttgcatgagagccatacaagaacattttgctgagatggctgctagtctc
aagcgtccagattcgggggcttcaggcctccctggaagacctggtccccctggcccccct
ggtcctcctggagagaatggtttccctggccagatgggaattcgtggcctccctggcctg
aaaggcccacctggtgctcttggtttgagaggacctaaaggtgacttgggagaaaaggga
gagcgtggccttccaggaagaggtcccaagggtttgcctggagcaacaggtctcccaggt
gacccaggccctgccagttatgggagaaatggccgggatggggagcgaggcccccctgga
gtggcaggaattcctggtgtacctggtcctcctggcccacctggccttcctggtttctgc
gagccggcctcttgcaccttgcaggctggtcagcgagcatttagcaaagggcctgatcag
tga

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