Ochotona curzoniae (black-lipped pika): 121160332
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Entry
121160332 CDS
T11174
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121160332 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121160332 (TTC37)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
121160332 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_12
ANAPC3
TPR_9
TPR_15
Fis1_TPR_C
ARM_TT21_C
TPR_5
ARM_TT21_5th
BTAD
TPR_30
Sel1
TPR_6
ARM_TT21_2nd
DUF7017
TPR_20
HAT_Syf1_M
HrpB1_HrpK
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
121160332
NCBI-ProteinID:
XP_040841994
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MSSKEVKTALKSARDAIKNKEYKEALKHCKTVLKQEKNNYNAWVFIGLAAAELEQPDQAL
GAYRKAAELEPDQLLAWQGLASLYEKSNHINAKDDLPGVYQKLLDLYESANKEKWCDVCK
KLVDLYHQEKKHLEVARTWHRLIKTRQEDGADNKELHQLWRKLTQLLAESAQDQNNETQQ
LLLTAFENALNLSEEIPSEDHQALYKHFIHCLSKCPHESARLKAACEGMIGIYPTVQYPL
EVLCLHLIQSGCLTEEGQQYCCRLLEMDSKSGPGLIGLGVKALQDKKYEAAIKNLSEGLR
ESPLCTTGWYHLAEAQVKIHKPKEAVLSCNEALKHVEKLGASGSSLQQKNLCLRLKAEAL
IQASDCDSAEEAVRTLNQVSDANNVPELLVLKGLAYLNKGSLDEATKIMEDLLSSYPDLA
AVHALEALIHFTRKDYLQAEKCFQAAVEKAADVAEYHYQLGLTYWLMSEETRKDKTKALT
YFLKAARLDTYMGKAFCYLGHYYRDVVGDKNRARGCYRKAFELDEADSEAGAAAVDLSVE
LEDMETALAILTAVTQKAGAGTVKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGSYTTALKSFTKASELNPESVYSVFKVAAIQQILGKYKEAIAQFQLIIK
RKEDYVPALKGLGECHLLMARAALVDYLDGKAVDHIEKALEHFTWALQHRADVSCLWKLI
GDACTCLHAVSPSKVNVRVLGVLLGQKEGKQALKKSELLNLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAEAGSSESDLQELLEKSLHCLKKAVRLDSSNHVYWNALGVVACYSGI
RNYALAQHCFIKSIQSEQINAVAWTNLGVLYLGNEHIEQAHEAFKMAQALDPSYLICWIG
QALIAEAVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AIPAAQVVLCKYIERIQNYAPAFTMLGYLNEHLQLKKQAADAYQRAVLLSAEDKDTYNAT
VRHYGRLLCSIGEYDKAIQAFKSTPLEELEDIVGFALALFMKGLYKESGKAYEKALSVVE
SEQDKAHILTALAITEYKQGKLDAAKTLLFKCSILKEQTPESLQALCALGLAMQDATLSK
AALNELLKHSQHKGSGYQRCLLTSAIHALQGRSVAVQRQMSKAVHSNPADPALWSLLSRV
VAQHAQRNAKGGAVAGTVAHILDSNHGKKALLYTAVNQLAMGSRSAEDERNIALKTIQKA
ALLAPGDPAVWAGLMAACHADDKLALVNNSPPKRMDLYLALLSAVSASIKDKEFLENYKQ
SLEKWSLSQAVTGLVDTGRTAEAEALCTKTLKSNPDQPAVVLLLRQVQCKPLLESRKLLP
DAVLEELQKTVMSNSASVPAWQWLAHVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLSS
LLRLALLALEVCRADVSSDHWPSLVQEATTEAMKLCFCPLAVLLQALLQFRRKMGARDTR
RLLERVVYQPGYPPSVVSTARWYLLRHLHAKNDYELIDVLIKNAETHSDTRALELNQKLS
SQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtgaagacagctctaaaaagtgccagagatgcaatcaagaacaaa
gagtacaaagaagctttgaagcattgtaagacagtgttgaaacaagagaaaaataactat
aatgcctgggtttttattgggcttgccgcagctgagctggaacagcctgaccaggccctg
ggcgcctataggaaagctgctgagctagaaccagaccagttgctagcatggcagggatta
gcaagtttatatgagaaaagcaatcacataaatgctaaggatgacttacccggggtttac
cagaagcttctggatctttatgaaagtgctaataaggagaagtggtgtgatgtctgtaag
aaacttgtggatctatatcaccaagaaaagaaacatctggaggtggctcgaacatggcac
agactgatcaagacacggcaggaagatggtgcagacaacaaggagctccatcagctgtgg
cggaagctgacccagctgcttgcagagagcgcccaggaccagaacaacgagacccagcag
ttgcttttaactgcatttgagaatgcactgaacttgtcagaggagattcctagtgaggat
caccaagcgctttataagcatttcatccactgtttatccaaatgtcctcatgagtcggcc
cggttgaaggcggcctgtgaaggaatgataggcatctatcccacggtgcagtatccattg
gaagtgctttgcttgcacttaattcaatcaggatgtcttactgaggagggacagcagtac
tgttgcagactgttagaaatggattcaaaaagtggtccaggccttatcggattaggtgtc
aaagcactgcaagacaaaaagtatgaagctgctattaagaacctatcagaaggattaagg
gagagccctctctgcacaactggatggtatcatctggcagaagcccaagtcaaaattcat
aagcccaaggaagctgttctttcatgcaatgaagcgttgaagcatgtagagaagcttggt
gcatctgggagcagtctacagcagaagaatctgtgtctgcgtttgaaagcagaggctttg
attcaagcctcagactgtgactctgctgaggaagcagtccgtaccctgaaccaggtttct
gatgcaaataatgtcccagaacttctggttctcaaaggcttggcctatctgaacaaaggc
tcattggatgaagctacaaagattatggaagaccttctctcttcttatcctgacctagct
gcagtccacgcgcttgaagctttaattcattttaccagaaaggactacctccaagcagaa
aaatgttttcaggcagcagtggagaaggctgctgatgttgctgaatatcattaccaactt
gggctaacatattggttaatgagtgaagaaacaagaaaagataaaacaaaggctcttacc
tactttctgaaggccgcaagactggatacatacatgggcaaagctttctgctatttgggt
cattattacagagatgtggtgggagataaaaacagagcccgcggatgttacaggaaagct
tttgaattagacgaagcggatagtgaagcaggagctgctgcagttgatctgagtgtggag
cttgaagacatggaaacggccctagctatcctaacagcagtaactcagaaagcaggtgct
ggaacagtgaagtgggcctggcttaggcgtggactgtactatttgagagcgggtcaacat
tctcaagcagtggctgatttacaggcagcactgagggcagacccaaaggactttaattgt
tgggagtcattaggagaagcatacttaagcagagggagctatacgacggccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccgtatacagtgtgtttaaggttgcagca
atacaacaaatcctaggcaaatacaaggaggctatagctcaattccagctgatcattaaa
aggaaagaagattatgtgcctgccctgaaaggtttgggcgaatgccatctcctgatggcc
agagcagctctcgtggattatcttgatggaaaagctgtggatcacatagaaaaagcactg
gaacatttcacttgggccctgcagcaccgagctgacgtgtcctgcctttggaagctgatc
ggtgatgcctgcacctgcctgcatgctgtctccccatccaaagtgaacgtccgtgtcttg
ggagtgctactaggccagaaagaaggaaaacaagcactgaagaaaagtgagctcctgaat
ctgggaggaaggtgttatggtcgtgcattgaagctaatgtctacttctaatacatggtgt
gatcttgggatcaattactatcgccaagtgcagcaccttgcggaagcgggcagcagtgaa
agtgatcttcaagagttgctggagaaatctctgcattgtctgaagaaggcggtgagactc
gacagcagcaatcacgtgtactggaatgctcttggtgtggttgcctgttatagtggtatt
agaaattatgcccttgctcagcattgcttcatcaaatcaatccagtcagaacaaattaat
gctgttgcatggaccaacttgggagtgttgtacctgggcaacgagcacattgagcaagct
catgaagctttcaaaatggctcaggcccttgatccatcttacttaatttgctggattgga
caagctcttattgcagaggcagttggaagttacgataccatggatctcttcaggcacacc
acagagctcagtatgcacacggagggagccataggttatgcgtactgggtgtgcacaaca
ctgcaagataagagcaaccgagagacggagctgtaccagtacaacattctccagatgaat
gctatcccagcagcacaggttgtcttgtgcaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacctaaatgaacacctgcaattgaagaagcaagcggca
gatgcctaccaaagagcagttttgctatctgcggaagacaaagatacatataatgctaca
gtaagacattatggcagattgttatgttccattggtgaatatgataaagctatccaggct
tttaagtctacgccactggaagagttagaagacatcgtaggttttgcattggctttattt
atgaaggggctgtataaagagagcggcaaagcttatgagaaagccttgtctgttgttgaa
tcagagcaagacaaagcccatattttaacagccctggcaatcacggagtataaacaaggg
aaactggatgcagctaagacattgctgttcaaatgctctatcttaaaggaacaaacccca
gagagcctccaagcactgtgtgctctgggcttggccatgcaggacgccaccctgtcgaaa
gcagccctcaatgagttactgaagcacagccagcacaaaggcagtggttaccagaggtgc
cttctgacctcagccatccatgccctgcaaggccgcagcgtggcggtgcaacggcagatg
tccaaggccgtccacagtaaccctgctgatcctgcgctttggtctctgttgtcccgtgtt
gttgctcagcatgcccaacgaaatgcaaagggaggtgctgtggctggaactgtggctcat
attctggactcaaatcatgggaagaaggcgctactgtacactgcggtcaaccagttggcg
atgggaagcaggtcagcagaagatgaaagaaatattgctctgaagaccattcagaaagca
gcccttcttgctccaggtgaccctgctgtctgggctgggctcatggcagcatgtcacgcc
gatgataaactggctctggtgaacaacagtcccccgaagaggatggatttatatttggcc
ctgctgtctgctgtttctgcttcaattaaagacaaagaattccttgaaaattacaagcag
tctcttgaaaagtggtccctgtcacaggctgtcactggtctagtagacactggaagaaca
gctgaggccgaagctctctgcacaaagactttaaaaagtaatcctgatcagccagctgtt
gttttgcttttaagacaagttcagtgtaaacctctcctggagtcccggaagcttctccca
gatgctgtcctggaagaactgcagaagacggtgatgtccaattcggcctctgttccagcg
tggcagtggctggctcatgtctatcagtcgcaggggatgatgggtgctgccgagatgtgc
tacaggaagagtctccaagtggcctcgcagcagggcagctggagcgggaagctctcgagt
ctgctgagactcgccctgcttgccctcgaagtctgcagggctgatgtttccagtgaccac
tggccatcgttggttcaagaggctaccaccgaagccatgaaactttgtttttgtccattg
gctgttcttttacaagccttgttacagttcagacgcaaaatgggggcaagagacacacgg
cgactgttggagagggtggtctatcagcctggataccccccgtctgtggtatcaactgcg
cgttggtatctgctgcgacacctacacgccaaaaatgactatgagctcattgacgtgctg
atcaagaacgcagaaacccacagcgatacaagggcactggaactgaatcagaaattatcc
tcgcaatag
DBGET
integrated database retrieval system
