Ochotona curzoniae (black-lipped pika): 121161634
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Entry
121161634 CDS
T11174
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03082
ATP-dependent chromatin remodeling
ocz05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121161634 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
121161634 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121161634 (SS18L1)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121161634 (SS18L1)
GBAF(ncBAF) complex
121161634 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
121161634
NCBI-ProteinID:
XP_040844083
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQSILDFQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMTLGPGALTQSGPGQGLHAQGSLSDAIGSGLPPTSLLQ
GQIGNGPSHASMQQTAQSTLPTTSMSMSGSGHGSAPGYSHAGPSSQSVPMQGQGPISSYV
SRSNINMPSNPVPMMHQQAATSHYNSAQGGSQHYQAQSSIAMMGQGGQGSGMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGASESMNQQYYPDGHGDYTYQQSSYTEQSYDRS
FDESTQHYYEGGNSQYNQQQAGYQQGTAQQQGYSGQQYPGQQSYPGQQQAYGPTQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtccgcccggccgcgaggcaagggggaggtcacgcagcagacc
atccagaagatgctggatgagaaccaccacttgattcagagcatcctggacttccaaagc
aagggcaagacagccgaatgcacacagtaccagcagattctgcaccggaatctggtgtac
ctggccaccatcgcggactccaaccagaatatgcagtccctgctgcccgcgccaccgacc
cagaacatgaccctgggccctggtgccctgacacagagtggccccggccagggcctgcac
gcccagggcagcctcagcgacgccattggctcaggcctgcccccgacctccctcttacag
ggccagattggcaacggccccagccacgcgtccatgcagcagacggcgcagagcacgctg
cccaccacctccatgagcatgtcaggcagcggccacggctcggcgcctggctacagccac
gcaggaccctcctcgcagagcgtccccatgcaggggcagggccccatcagcagctacgtg
tcccgcagcaatatcaacatgccctctaacccagttcccatgatgcatcagcaggcggcc
acatcgcactacaactcggcgcagggcgggagccagcactaccaggcccagtcatccatc
gccatgatgggccagggcggtcaggggagcggcatgatgggacagcggcccatggcgcca
taccggccatcccagcaaggctcttcgcagcagtacctgggccaggaggagtactacagt
gagcagtacagccacagccaaggcgcctcggagtccatgaaccagcagtactacccagac
ggccatggtgactacacgtatcagcagtcatcctacacggaacagagctacgaccgctcc
tttgatgagtctacacagcactactacgaggggggaaactcccagtacaaccagcagcag
gctggctaccagcagggcactgcccagcagcagggctactctgggcagcagtaccccggc
cagcagagctatcctgggcagcagcaggcctacgggccaacccagggagcaccctcacag
tactccagctaccagcaaggtcaaggccagcagtacgggagctaccgggcctcacagaca
ggaccctccgcccagcagcagcggccctacggctacgagcagggccagtatggaaactac
cagcagtga
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