Ochotona curzoniae (black-lipped pika): 121161698
Help
Entry
121161698 CDS
T11174
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04151
PI3K-Akt signaling pathway
ocz04510
Focal adhesion
ocz04512
ECM-receptor interaction
ocz04820
Cytoskeleton in muscle cells
ocz04974
Protein digestion and absorption
ocz05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121161698 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121161698 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121161698 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121161698 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121161698 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
121161698 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocz00535
]
121161698 (COL9A3)
Proteoglycans [BR:
ocz00535
]
Extracellular matrix (ECM) proteoglycans
Others
121161698 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
121161698
NCBI-ProteinID:
XP_040844197
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MASSLGHLPTPSRLLQWMGGCTSGCRWWLLESYDLGDVSAPPGLQQGHLALPTGVAFSLL
SADVAKHRLWADLRVRTGRYPPGTRGLGAWRRSASHRVPVGPRHWGRATKGVFLPPTAPG
PGNFNSGAGLGTPQPGSPPPRWARLNGGLVHAAPAPGPPRARPRLSPRRRRHRRALRAQS
AAMARAPALLLLLLGQLLAAGAAQKAGPRGPPGPQGPPGKPGKDGVDGEAGPAGLPGPPG
PKGAPGKPGAPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGP
PGEAGVSGLPGGSGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPPGP
PGPPGMPGFKGPAGYKGEQGETGKDGEKGDPGPPGPPGLPGTVGLQGPRGSQGLPGPLGP
PGDRGPIGFRGPPGIPGAPGRVGDRGERGLDGFRGPKGDLGRAGPKGIPGVAGPGGEPGT
PGKEGRDGVPGLDGEKGEAGRSGAPGEKGPDGLPGLPGRAGSKGEKGELGRAGELGEAGP
SGEPGVPGDVGVPGERGEAGHRGSAGALGPQGPPGPPGIRGFQGQKGSMGEPGLPGPQGL
RGDTGDRGLGGAAGPKGEQGVAGSDGLPGDKGELGPSGPIGQKGDSGSRGEPGPKGIQGS
NGTSGVQGVPGPPGPLGIQGEQGIPGITGKPGVPGKAASEQRIRELCGGMVSERIAQLAA
HLRQPLAPGATGRPGPAGPPGPPGPPGSIGHPGTRGPPGYRGPPGELGDPGPRGSPGDRG
DKGAAGAGLDGPDGDQGLPGPQGVPGISRDGQDGAHGEPGLPGDPGLPGAVGAQGTPGIC
DTSACQGAVLGGNGEKSGPRSS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacttgggcacctcccaacaccgtcacgactgctgcagtggatggggggg
tgcacatctgggtgcaggtggtggttgctggaatcctatgacctgggggatgtgagcgcg
cccccaggcctccagcagggccacctggccctccccactggtgtcgcattttcacttctg
agtgctgacgtggccaagcaccggttgtgggcagatctcagggtccgtactgggcgctac
ccgcctggtactcgtgggctgggggcgtggcgccgcagcgcttcccacagggtccctgtc
ggcccccgccactgggggcgcgcgacaaagggtgtctttcttccccccaccgcgccaggc
ccgggtaattttaactctggcgccggcctggggacgccgcagcccgggtcccctccgccc
aggtgggcccggctgaatgggggtcttgtgcacgccgcccccgcccccggcccgccccgg
gcccgcccccggctgtcgcctcgacgccgccgccatcgccgggcgctcagagcgcagagt
gcagccatggcccgcgcgcccgccctgctcctgctgctgctcggacagctcctggcggcc
ggcgcggcccagaaagccggaccgagaggcccccctggcccgcagggcccccctgggaag
cctggcaaggacggcgtggatggggaagctggtcctgcgggcctgcccggacccccggga
ccaaagggggcccctgggaagccaggggcgcctggagaggctggactgcccggactgcca
ggcgtggatggtctgactgggcaggatggaccccctggaccaaagggtgctcctggagaa
cgcgggagcctgggacccccggggccacccgggctggggggcaaagggctcccaggacca
ccgggagaggcaggcgtgagtggcttgcctggagggagtggcctacgtggccccccagga
ccctctggattgccaggcctccctggcccccctggcccccctggccccccgggacaccca
ggggtcctccctgaaggtgcaacggacctgcagtgcccttccatctgcccaccaggccct
cccgggccaccaggaatgccagggttcaagggtcctgctggctacaagggggagcaagga
gagaccggcaaggatggtgagaagggtgaccctgggcctcctgggcctcctgggctcccg
ggcactgttgggctacagggcccccggggatctcaaggacttccagggccacttggaccc
cctggggaccggggtcctatagggttccgaggcccccctgggatcccaggagcacctggc
agagtgggtgacagaggcgagagaggcctcgacgggttccgtggccccaagggtgacctt
ggcagagctggtcccaaaggcatccccggagtggctgggcctggcggagagccgggcacg
ccaggcaaagaaggccgggatggtgtgccgggcctcgacggcgagaagggagaggcaggt
cgcagtggtgcccctggagagaagggtcctgacgggctgccgggtctccctggcagagca
ggctccaaaggcgagaagggagaactgggccgagctggggagctaggtgaggctggcccc
tctggagagccgggtgttccgggagatgtcggtgttcccggggagcgcggcgaggctggc
cacaggggctctgcaggggcccttggcccacaaggtcctccagggccccctggcatccga
ggcttccagggccagaagggcagcatgggtgagcctggcctgccaggcccccagggtctt
cgaggagacacaggtgatcggggcctgggaggtgctgcaggtcccaagggagaacaggga
gtggcaggttccgatggtcttcctggagacaaaggcgagctgggacctagcggcccaata
ggacagaaaggagattccggcagtcgaggggagccaggtcccaagggcatccagggctcc
aacggcaccagcggtgtgcagggcgtcccgggccccccaggccccctgggcatccagggc
gagcagggtatcccaggcatcacgggaaagccaggagttccgggcaaagcagccagtgag
cagcgcatccgagagctgtgcgggggcatggtcagcgagcgaattgcacaactggctgca
cacctgaggcagccgctagccccaggcgccactggccggcccggtccagccggtcccccc
ggccccccaggaccccctggctccattggtcaccctggcactcgaggacccccaggatat
cgtggtccccccggagagctgggagatcctggacccagagggagcccaggagaccgaggt
gacaaaggtgcggcaggcgctgggctggacgggcctgacggggaccagggactcccagga
ccacaaggtgtacctggcatcagcagagatggccaagacggcgctcacggtgagcctggg
ctgcctggcgatcctggccttcccggggccgtcggtgctcaggggactccgggcatctgt
gacacgtcagcctgccaaggagccgtgttaggagggaatggggagaagtcgggccccagg
agctcctga
DBGET
integrated database retrieval system
