Ochotona curzoniae (black-lipped pika): 121163531
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Entry
121163531 CDS
T11174
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
ocz04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
121163531 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
121163531 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocz04040
]
121163531 (TRPC4)
Ion channels [BR:
ocz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121163531 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121163531
NCBI-ProteinID:
XP_040846996
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGVRMRHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTIQSANAAKESSNPA
DSEEKSDNEGNSKDKKKNLSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRR
VNFVTDIKNFGLFHRRSKQNTNQIFSVSEEVARQQAAGPLEGTIQLESRGLVSRGDLNIP
GLSEQCVLVDHRERNTDTLGLQVGKRACSFESDKVVVEDTVPIIPKEKHSKEEDSSIDYD
LSLTDTVTHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctactacaaaagaaatgttaacgccccgtacagagaccgcatccctctg
aggatagtaagagcagaatcagaactttccccatcagaaaaggcctatttgaatgcagtg
gaaaaaggagattatgcaagtgtcaagaaatcacttgaagaagctgaaatctatttcaaa
atcaatattaattgcattgatcctcttggaagaactgccctcctcattgccattgaaaat
gagaatttggagctcattgagttgctcttaagcttcaatgtctatgttggagatgcgctg
ctacacgctatcagaaaagaagttgtcggcgctgtggagctgttactgaaccacaaaaag
ccgagtggagagaaacaggtgcctcccatactccttgataagcaattctctgaattcaca
ccggacattacaccaattatcttggcagcccatacaaataattatgagataataaaactc
ttggttcagaaaggagtctcggtaccccgaccccatgaggttcgctgtaactgtgtggaa
tgtgtgtccagctcggacgtggacagcctccgtcactcacgctccaggctcaacatctac
aaggccttggccagtccctctctcattgcgctgtcaagtgaagatccttttctcacagcc
ttccagctgagttgggagctccaagaactgagtaaggtagagaatgaattcaaatcagag
tatgaagaactgtcacggcagtgcaaacaatttgctaaggacctcctggatcagacaaga
agttccagggaactggagataattcttaattaccgagatgacaatagtttgctagaagaa
caaagtggaaatgatctcgcaagactaaaattggctattaagtaccgtcagaaagagttt
gttgcccaacccaattgtcaacaactcctggcatctcgctggtatgatgaattcccaggt
tggaggagaagacattgggcggtgaagatggtgacgtgtttcataataggacttcttttc
cctgtcttctctgtgtgctacctgatagctcctaaaagcccactgggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatttgacttttttgttccttctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccatgggtcctgggctttatatggggagaaattaaacag
atgtgggatggtggacttcaagattacatccatgattggtggaatctgatggattttgtg
atgaattctttatacttagcgaccatctccttgaaaattgttgcatttgtaaagtacagt
gcgctaaatccacgagaatcttgggacatgtggcatcccacgcttgtggcagaggcttta
tttgctattgcaaacatcttcagttccttacgtctgatctcactctttactgcaaattct
cacctgggacctctgcaaatatctctgggaagaatgctcctggacattttgaagttcctg
ttcatatactgcctggtgttgctagcatttgcaaatggcctaaatcaattgtacttctat
tatgaagaaacaaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacacttcaatccctcttttggtcaatatttgggctcatcaat
ttgtatgtgaccaatgtcaaagcacagcatgaattcactgagtttgttggtgccaccatg
ttcgggacatataatgtcatctctttggttgtcctactcaacatgttgatagctatgatg
aataattcttaccaacttattgctgaccatgcagatatagagtggaaatttgctcgaaca
aagctttggatgagctactttgaagaaggagggacgctccctactcccttcaatgtcatc
ccaagccccaagtccctctggtacctggtcaagtggatatggactcatctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaaccataggggtaagaatgcggcataggaga
gctgctgacaatttgaggagacatcaccaatatcaagaagttatgaggaacctggtgaag
cgatacgttgctgcaatgattagagatgctaaaactgaagaaggcctgactgaagagaac
tttaaggaactcaagcaggacatttctagctttcgctttgaagttcttggtttgctcaga
ggaagcaagctttccaccatccaatctgcaaatgctgcaaaggagtcatccaacccggct
gactcggaggaaaagagtgataacgaaggtaatagcaaagacaagaaaaagaatctcagc
ctttttgatttaaccaccctgattcatccaagatcagcagcaattgcctctgaaagacat
aacataagcaatggctctgccctggtggtgcaagagccaccaagggagaagcagaggaga
gtgaattttgtgaccgatatcaaaaacttcgggttgtttcacagacggtcaaagcaaaac
acaaaccaaatcttctctgtttcagaagaagttgctcggcaacaggcggcaggaccactt
gagggaactatccaactggaatcccgaggattagtttcacggggtgatctgaacattcct
ggtctcagtgaacagtgtgtcttagtagaccatagagaaaggaacacggacacgctgggt
ctacaggtaggcaagagagcgtgttcattcgagtcagacaaggtggtggtggaggacacc
gtgcccattataccaaaggagaagcactccaaggaggaggactctagcatagactatgat
ttaagcctcaccgacacagtcacccatgaagattatgtgacaaccagactctga
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integrated database retrieval system
