Orrella dioscoreae: ODI_R3272
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Entry
ODI_R3272 CDS
T05133
Name
(GenBank) RND efflux system, outer membrane lipoprotein CmeC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
odi
Orrella dioscoreae
Pathway
odi01501
beta-Lactam resistance
odi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ODI_R3272
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ODI_R3272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
odi02000
]
ODI_R3272
01504 Antimicrobial resistance genes [BR:
odi01504
]
ODI_R3272
Transporters [BR:
odi02000
]
Other transporters
Pores ion channels [TC:
1
]
ODI_R3272
Antimicrobial resistance genes [BR:
odi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ODI_R3272
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
ODI_R3272
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
ODI_R3272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
SOE51204
UniProt:
A0A1C3K577
LinkDB
All DBs
Position
I:complement(3553290..3554720)
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AA seq
476 aa
AA seq
DB search
MTFSFLPLFLALRRALPLATLALAGCGLMRSDYTPPAVTVPVQWQQAQPAQQGPVTQDPW
WTLFQEPALDELVNQALARNNDLAAAAIRVRRAQLQQGLAEDALFPDLGGNANVGRDRAL
RGDRAITRSNNVGLTVSYELDLWNRLGSQRDAARWQALATEEDRASAALSLSATTVNLYW
QLAHINERLVTSQQSIDTARLTLRLVQAQFDAGAVSPLDLAEARRNVAAQEASHTQLLQQ
RVEYLNALAILFDGPPGQAFADPRVLPTGEPPAVRAGVPAEVLARRPDLRAAELRLRGLL
ATVDATRASYYPPLTLTGALGSASTALGNVLQNPVASLGAGLTLPFLRWNEMRLNTRVSE
ADFDEAVVNFRQSLYQSLADVENALSAREQSTRQNAWLAQALADAREAERLYEIRYRAGA
VALRVWLEAQEQRRTAEIALADNRLQRLLNQVTLYQALGGSDQPVAAEGATPAATP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgactttttctttcctgcccctgttcctcgcgctgcgccgcgccttgcccctggccacc
ctggcgctggcgggttgcggcctgatgcgcagcgactacaccccgcccgccgtgaccgtg
ccggtgcaatggcagcaggcccagcctgcgcagcagggtcccgtgacccaggacccctgg
tggacgctgttccaggagcctgccctggatgaactggtcaaccaggccctggcgcgcaac
aacgacctggcggctgccgccatccgcgtgcggcgcgcgcagctccagcagggactggcc
gaggacgccttgttcccagacttgggcggcaatgccaacgtgggccgtgaccgcgccttg
cgcggcgatcgcgccatcacgcgcagcaacaacgtcgggctgaccgtcagctatgagctg
gacctgtggaatcgcctcggcagccagcgcgacgccgcgcgctggcaggccttggccacc
gaggaggaccgggccagcgccgcgctgagcctgtccgcgaccacggtcaacctgtactgg
caactggcgcacatcaacgagcggctggtcaccagccagcagagcatcgacaccgcgcgc
ctcacgctgcggctggtgcaggcgcagttcgacgcgggcgcggtctcgccgctggacctg
gccgaggcgcgccgcaacgtggccgcgcaagaggcctcgcacacgcagctgctgcaacag
cgcgtggaatacctgaacgcgctggcgatcctgttcgacggcccgccgggccaggccttc
gccgatccgcgcgtgctgcccacgggcgagccgcccgccgtgcgcgcaggcgtgcccgcc
gaggtgctggcgcgccgtcccgacctgcgcgccgccgagctgcgcctgcggggcctgctg
gccacggtggacgcgacgcgtgccagctattacccgccgctgacactgaccggcgcgctg
ggatcggccagcaccgccttgggcaacgtgttgcagaacccggtggcgtcgctgggcgcc
ggcctgacgctgcctttcctgcgctggaacgagatgcggctgaacacgcgcgtgtccgaa
gccgattttgacgaagcggtggtgaacttccgccagtcgctgtaccagtcgctggcggat
gtcgagaacgccttgtcggcgcgcgaacagtccactcggcagaacgcctggctggcgcag
gccctggccgatgcgcgcgaggccgagcgcctgtacgagatccggtatcgcgctggcgcg
gtggccttgcgagtctggctggaggcgcaggagcagcgtcgcacggcggagatcgcgctg
gccgacaaccgcttgcagcgcctgctgaaccaggtcacgctgtaccaggcgctgggcggc
agtgaccagcccgtggcggccgagggcgcgacgccggcggcgacgccctga
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