Orrella dioscoreae: ODI_R4263
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Entry
ODI_R4263 CDS
T05133
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
odi
Orrella dioscoreae
Pathway
odi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ODI_R4263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R4263
Enzymes [BR:
odi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ODI_R4263
DNA repair and recombination proteins [BR:
odi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ODI_R4263
Prokaryotic type
ODI_R4263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SOE52524
UniProt:
A0A1C3K6A0
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All DBs
Position
I:4676480..4677229
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AA seq
249 aa
AA seq
DB search
MTASNLLSTSLADEAAQLSPAWRDALAQPAAAQALARLQAFLDERRQAGAIIYPARPFRA
LELVAPEDTRVVILGQDPYHGPGQAQGLAFSVPDAMRRPPSLRNMFLEIASEAGVTPADA
KARADTMPNDLTRWARQGVLLLNTSLTVEDGQAGAHAKRGWEAVTDALIQRVAALPTPKV
FLLWGAHAQAKAALLPADGRHRVLMANHPSPLSARRPPVPFLGCDHFRQANAWLVEQGAA
PIDWEAPAA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctccaacctgctcagcacctccctggccgacgaggccgcgcaactgtcgccg
gcctggcgcgacgccctcgcccagcccgccgcggcgcaagcgctggcgcgcctgcaggcc
ttcctggacgagcggcggcaggccggcgccatcatctatccggcccggcccttccgcgcc
ctggaactggtggcgcccgaagatacccgcgtggtgatcctggggcaggatccctatcac
ggacccggccaggcgcagggcctggcgttttcggtgccggacgccatgcgccgcccgccc
agcctgcgcaacatgttcctcgagatcgcaagcgaagccggcgtgacgccggccgacgcc
aaggcccgcgccgacaccatgcccaacgacctgacccgctgggcgcgccagggcgtgctg
ctgctcaacacctcgctgaccgtggaagacggccaggcgggcgcacacgccaagcgcggc
tgggaggcggtcaccgacgcgctgatccagcgcgtggctgcgctgcccacacccaaggtc
ttcctgctgtggggcgcccacgcgcaggccaaggccgcgctcctgcccgccgatggccgc
caccgtgtgctgatggccaaccatccctcgccgctgtccgcgcgccgcccgcccgtgccc
ttcctgggctgcgaccatttccggcaggccaatgcgtggctggtggaacagggtgcggcg
ccgattgattgggaagcccccgcggcctga
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