Ostrea edulis (European flat oyster): 125647948
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Entry
125647948 CDS
T09123
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125647948
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oed01007
]
125647948
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125647948
Enzymes [BR:
oed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
125647948
Amino acid related enzymes [BR:
oed01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125647948
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125647948
Prokaryotic type
125647948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
RM8_Med14
Motif
Other DBs
NCBI-GeneID:
125647948
NCBI-ProteinID:
XP_048730777
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All DBs
Position
6:complement(91875911..91981457)
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AA seq
776 aa
AA seq
DB search
MAITRSTVRVLLRRSILSEKTLTCFRFFHLSTYYFEPTSWRREKDNMASKSKKVQPPWSP
PEGTEVPKLKLYNSLTRQKEEFVPQKGRRVLWYSCGPTVYDSSHMGHARSYISIDILRRV
LQNYFNYDVFYCMNITDIDDKIIKRARQNYLYEEYRNKNLAVSQILGDVEAALKPFLVKL
EQEQDPDKKTMYYKIKVKVEKAVSEVKASQDEAQFRERLYVDGKDVLCDWLDKLHGSEVT
DNSIFAKLPQFYEEDYHKDMAALNVIPADVLTRVSEYVPENVDYIKKIIENGFGYESNGS
VYFNTAAFDNTEGHTYAKIVPEAYGDKAALNEGEGELSVSAERQEEKKNSTDFALWKASK
PGEPSWDSPWGKGRPGWHIECSAMASSIQGESLDIHTGGFDLRFPHHDNELAQAEAHFNN
DHWVRYFLHAGHLTIEGCKMSKSLKNFITIKDALKKHTPRQLRLLFLLHQWKDTLDYGEN
SMEVAIRYEKMVNEFFLNVKNLLRSTPGTGIASFEKWSKEEMDLNERYFETRDAVHEALC
DNVNTRTALEHLRELIGTANVYMANSRSNDKTPNRMILKNIAGYITELFKVFGAIETDEE
IGFPQSTTQNVNVEETVMPFLTAFAQFREDVRTISREQKAIEILKLCDKLRDDVLPNLGV
RLEDGTSPPTIKLVDRETLMKEREEKLKQEELKQLEKEKRKLEMEAKLAQEKIPPWELFK
KETDKYSQFDDKGIPTHDTEGKELSKGQIKKLVKLYEKQEKTYNKHMANAETNSGS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggccatcactagatcaacagttagagtgttactgagaagatccattctttcggaaaag
actttaacctgctttcgattttttcacctgtcaacatattattttgaacctactagttgg
agaagggagaaagataacatggcttcaaaatccaagaaagtccaacccccatggagccct
cctgagggaaccgaggtccccaaactgaagttgtacaacagtctgactcgacaaaaggag
gagtttgtcccccagaaaggacgccgtgttctctggtacagctgtgggcccacagtctac
gattcctcgcacatgggccatgcccggtcgtatatttctatagacattctgaggcgagtt
cttcagaactacttcaactacgacgtcttctactgcatgaacatcactgatattgacgac
aagattatcaagagagctcgtcagaattacctgtatgaggaataccggaacaagaacctg
gcagtgtcacagatcctgggggacgtggaggcagccctgaagcctttcctagtcaaactg
gaacaagagcaggatcccgacaagaaaaccatgtactataaaatcaaggtcaaggtggaa
aaagctgtgtcagaggtcaaggccagtcaggatgaggctcagtttagagagagactgtat
gttgatggcaaggatgttctctgtgattggttggataaactccatgggtcagaggtcaca
gacaattccatatttgccaagctgccacagttctatgaagaagactaccataaagacatg
gcagctttaaatgtcataccagctgatgtccttaccagagtcagtgaatatgtaccagaa
aatgtggactacatcaagaaaatcatagagaatggttttggatacgagtccaatgggtca
gtttatttcaacactgctgcctttgacaacacggagggtcacacttacgccaagattgtc
cctgaggcttatggtgacaaagcagccctcaatgagggagagggtgaattgagtgtgtca
gcagagaggcaggaagagaagaagaactcgacagattttgccctgtggaaggcctcgaag
cctggtgaaccctcgtgggactcgccctggggaaagggtcgtccaggttggcatattgaa
tgctctgcgatggccagcagtatccaaggagaatctctagatatccacactggaggcttt
gatctcagatttccacatcacgataatgaactcgctcaagcagaggctcacttcaacaat
gatcactgggtgagatacttcctccatgctggtcatctgaccattgaaggctgcaagatg
tccaagtctctgaaaaacttcatcaccatcaaggatgccctgaagaagcacacgcctcga
cagttgcgtctcctcttcctgcttcaccagtggaaggacacgctagactacggggagaac
agcatggaggttgccatcagatacgaaaaaatggtcaatgaatttttcctgaatgtgaag
aacttgttgagaagcactcccggtacaggaatagcttcctttgagaagtggtctaaggaa
gaaatggaccttaatgagaggtactttgaaaccagagatgctgtgcatgaagccctgtgt
gataatgtcaacacaaggactgccttagaacacctgagggagttgattggaacagccaac
gtctacatggccaactccaggtctaacgacaagacacccaatagaatgatcctcaagaac
attgcaggctacatcactgaactgttcaaggtgtttggagctattgaaacagatgaagaa
attggtttcccacaatccaccacacaaaatgtcaatgttgaagaaacagtgatgcctttc
ctcacagccttcgctcagttcagagaggatgtgaggacaatatccagagaacagaaagcc
atagaaatcctgaagttgtgtgacaagctgagggatgatgttttgccaaacctaggggtg
cgtttagaggatggaacttcgccgcccaccatcaaactcgtagaccgagaaactttgatg
aaggaacgggaggaaaaactgaagcaagaggagctgaaacaactagaaaaagagaaaagg
aaactagaaatggaagctaagcttgctcaggagaagataccaccctgggaactcttcaaa
aaagaaacagataaatactcacagtttgacgacaagggaatccctacacacgacacagaa
ggaaaggagctgtccaaaggtcagataaagaagctggtcaagctgtacgagaaacaggaa
aagacgtacaacaagcacatggcgaacgcagaaactaatagtgggtcctaa
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