KEGG   Ostrea edulis (European flat oyster): 125663602
Entry
125663602         CDS       T09123                                 
Name
(RefSeq) integrin beta-6-like
  KO
K06493  integrin beta 3
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03266  Virion - Herpesvirus
oed04081  Hormone signaling
oed04145  Phagosome
oed04148  Efferocytosis
oed04512  ECM-receptor interaction
oed04517  IgSF CAM signaling
oed04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    125663602
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    125663602
   04512 ECM-receptor interaction
    125663602
   04517 IgSF CAM signaling
    125663602
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125663602
   04148 Efferocytosis
    125663602
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125663602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oed04131]
    125663602
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oed04147]
    125663602
   04515 Cell adhesion molecules [BR:oed04515]
    125663602
   04090 CD molecules [BR:oed04090]
    125663602
Membrane trafficking [BR:oed04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    125663602
Exosome [BR:oed04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125663602
Cell adhesion molecules [BR:oed04515]
 Integrins
  Integrin beta subunits
   125663602
CD molecules [BR:oed04090]
 Proteins
  125663602
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_Teneurin EGF_TEN I-EGF_1 EGF_2 EGF_integrin
Other DBs
NCBI-GeneID: 125663602
NCBI-ProteinID: XP_056008967
LinkDB
Position
1:complement(19780217..19820567)
AA seq 799 aa
MTTIDDGDRNDKMCLNALYTGIIITVIAVCIPEVSLQMCSGSRCGECLVTRGCAWCKDRD
YGFDRCANMNKIIDDGCIDIVKRKNHTLQIIQDDDFSDGGPRKDPIQIKPQRVKIKLVPN
ADGLELPIFYRTARNFPLDLYFLNDPSYTMRSLVSTLNNLVNDIAGEIATLTNDFRFGLG
TSMDKVIMPFTRTDPRSVEFPCGDVAIYCDQPYSFIHRQPLTRNIQNFRAALSRVNTTAN
TDITEGLFDGLMQVMVCGDRIGWRRKSRRMVIFATDINFHQAGDGRFSGILEPNDCLCHL
DSNGKYTKAEIQDYPSVGQILQKARENNINVLFVIGGEDNAYVRRVYYDNLAAFLPGGID
KASALNTDASNILRIVGDSFRRLRDTVKLVTSSLPEELVLTLYTDCNTNGRLNDSTNICT
NLTLDKTANFIAYIQSNLTECPDKNTFTFTIFPEGLEERVNVDFEHVCDCDCQLEPEAEP
RSPKCNGRGRYECGTCICDDGWFGETCDCDGRGTETEACGTESGICNGAGNCTCRKCDCL
PGYSGEKCECNDQNCRSHNGLLCGGPAHGRCVCGECVCNANYTGDACDCTTITDTCRDKN
GTLCSDNGDCECGRCRCNVGYRGPVCRRCQNCPGTCENNNDCVECIGFKQGRYNETTCNR
KCRNVETVPLLEEASIDNGTSVTVCVLQDEFGCIINFNVHDLEMGQRILIKSTKRCPPSP
PDPLTIGLSLSGAIFLIGLLLLVIWKILTMLYDSMEYSKFESEIQNPAWEQSENPIYKEC
VTTVQNPLHDTEGNGNSGF
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgacaacaatagatgacggcgatagaaacgacaagatgtgtttaaatgccctctataca
ggaattattatcactgtaatagcagtatgcattccagaagtcagcctgcagatgtgttcg
ggatcgcgctgtggagagtgtctcgtcaccaggggctgtgcttggtgtaaggatcgggat
tacggatttgacagatgtgcgaatatgaacaagataatcgatgatgggtgcattgatata
gtgaagaggaaaaatcataccttacagattattcaggatgatgatttttctgacggaggt
ccacggaaagatccgatccaaattaaaccacaaagagtgaaaataaaactcgtacctaac
gctgatgggctcgaactccctattttctacagaactgcccgcaacttccctctcgatctg
tacttcttgaacgatccctcttacacgatgcgatcactggtatctacccttaacaatcta
gtcaatgatatagctggagaaatcgccacattaaccaacgatttcagattcggactcggg
acgtctatggacaaagtcatcatgccctttaccagaactgatcctcgaagtgtggaattt
ccctgtggggatgtcgctatctactgtgaccaaccatactctttcattcatcgacaacct
ctcactcgaaacattcaaaactttagggccgctctaagtcgcgtgaacacaaccgctaat
actgacatcacagaaggactgtttgacggactgatgcaagtcatggtttgtggtgatcga
ataggatggaggaggaaatctagacgaatggttatcttcgccactgacatcaatttccat
caagcaggcgacgggaggttttctggaattctagaaccaaatgattgtttgtgtcaccta
gatagcaatgggaaatatacaaaggcagaaattcaggattatccatctgttggacaaatc
ttacaaaaagcacgtgaaaacaacataaacgtcctgttcgttataggcggtgaagacaat
gcttatgttagaagggtctattatgacaatttggctgctttccttcctggcggtatagac
aaagcctctgcgctgaacacggatgcttccaacattctcagaattgttggcgatagtttt
aggcgccttcgcgatactgtgaaattagtgacaagcagtcttccagaggagctggtactg
accctgtacaccgactgcaacaccaacgggcgactcaacgattcaacaaatatttgcaca
aatctgacattggataaaacggcaaacttcatcgcttatatacaatcaaacctgacagag
tgccctgataaaaacaccttcactttcaccatcttccctgagggtctggaggagcgggtg
aacgttgactttgaacacgtgtgtgactgcgactgtcaacttgaacctgaggcggaacca
cgtagtcctaagtgtaacgggagagggcgctacgaatgtggaacatgtatctgtgacgat
ggatggtttggggagacctgcgactgtgacgggaggggtactgaaaccgaggcttgcggc
acagaatcaggaatttgtaacggtgccggaaactgtacctgccggaagtgtgactgttta
cctggatacagcggagaaaaatgtgaatgtaatgaccagaactgtcgttcacataacgga
ttgctgtgtggaggtccagcccatggcagatgtgtttgtggagaatgtgtttgcaatgct
aattatactggagatgcgtgtgactgtacgacgataactgatacatgcagagataagaac
gggaccctgtgctcagataatggtgattgtgagtgtgggagatgtcgctgtaacgtggga
tatagaggacccgtgtgtagacggtgtcagaattgtcctgggacttgtgaaaataacaac
gactgtgtagaatgcatcggatttaaacagggacgctacaacgaaactacatgcaatcgg
aaatgtcgaaacgtagaaactgtacctcttctggaagaggcgtccatcgacaatggaacc
tctgtaacagtttgtgttctacaagacgaatttggatgcattataaactttaacgtccat
gaccttgagatgggacaaaggatactaatcaagtctactaaaagatgtccccctagccct
ccagatccactgacaataggactcagtctctccggggccatctttctgataggtcttctg
cttctagtcatctggaaaatcttgacaatgttatacgacagcatggaatactcaaagttc
gaatcagaaattcagaatccagcctgggaacagtccgaaaatccaatttacaaagagtgt
gtaacaacggttcaaaaccctttgcacgataccgaaggaaatggaaattcaggtttttga

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