Ostrea edulis (European flat oyster): 125663602
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Entry
125663602 CDS
T09123
Name
(RefSeq) integrin beta-6-like
KO
K06493
integrin beta 3
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03266
Virion - Herpesvirus
oed04081
Hormone signaling
oed04145
Phagosome
oed04148
Efferocytosis
oed04512
ECM-receptor interaction
oed04517
IgSF CAM signaling
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
125663602
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
125663602
04512 ECM-receptor interaction
125663602
04517 IgSF CAM signaling
125663602
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125663602
04148 Efferocytosis
125663602
09142 Cell motility
04820 Cytoskeleton in muscle cells
125663602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125663602
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125663602
04515 Cell adhesion molecules [BR:
oed04515
]
125663602
04090 CD molecules [BR:
oed04090
]
125663602
Membrane trafficking [BR:
oed04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125663602
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125663602
Cell adhesion molecules [BR:
oed04515
]
Integrins
Integrin beta subunits
125663602
CD molecules [BR:
oed04090
]
Proteins
125663602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_Teneurin
EGF_TEN
I-EGF_1
EGF_2
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
125663602
NCBI-ProteinID:
XP_056008967
LinkDB
All DBs
Position
1:complement(19780217..19820567)
Genome browser
AA seq
799 aa
AA seq
DB search
MTTIDDGDRNDKMCLNALYTGIIITVIAVCIPEVSLQMCSGSRCGECLVTRGCAWCKDRD
YGFDRCANMNKIIDDGCIDIVKRKNHTLQIIQDDDFSDGGPRKDPIQIKPQRVKIKLVPN
ADGLELPIFYRTARNFPLDLYFLNDPSYTMRSLVSTLNNLVNDIAGEIATLTNDFRFGLG
TSMDKVIMPFTRTDPRSVEFPCGDVAIYCDQPYSFIHRQPLTRNIQNFRAALSRVNTTAN
TDITEGLFDGLMQVMVCGDRIGWRRKSRRMVIFATDINFHQAGDGRFSGILEPNDCLCHL
DSNGKYTKAEIQDYPSVGQILQKARENNINVLFVIGGEDNAYVRRVYYDNLAAFLPGGID
KASALNTDASNILRIVGDSFRRLRDTVKLVTSSLPEELVLTLYTDCNTNGRLNDSTNICT
NLTLDKTANFIAYIQSNLTECPDKNTFTFTIFPEGLEERVNVDFEHVCDCDCQLEPEAEP
RSPKCNGRGRYECGTCICDDGWFGETCDCDGRGTETEACGTESGICNGAGNCTCRKCDCL
PGYSGEKCECNDQNCRSHNGLLCGGPAHGRCVCGECVCNANYTGDACDCTTITDTCRDKN
GTLCSDNGDCECGRCRCNVGYRGPVCRRCQNCPGTCENNNDCVECIGFKQGRYNETTCNR
KCRNVETVPLLEEASIDNGTSVTVCVLQDEFGCIINFNVHDLEMGQRILIKSTKRCPPSP
PDPLTIGLSLSGAIFLIGLLLLVIWKILTMLYDSMEYSKFESEIQNPAWEQSENPIYKEC
VTTVQNPLHDTEGNGNSGF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatagatgacggcgatagaaacgacaagatgtgtttaaatgccctctataca
ggaattattatcactgtaatagcagtatgcattccagaagtcagcctgcagatgtgttcg
ggatcgcgctgtggagagtgtctcgtcaccaggggctgtgcttggtgtaaggatcgggat
tacggatttgacagatgtgcgaatatgaacaagataatcgatgatgggtgcattgatata
gtgaagaggaaaaatcataccttacagattattcaggatgatgatttttctgacggaggt
ccacggaaagatccgatccaaattaaaccacaaagagtgaaaataaaactcgtacctaac
gctgatgggctcgaactccctattttctacagaactgcccgcaacttccctctcgatctg
tacttcttgaacgatccctcttacacgatgcgatcactggtatctacccttaacaatcta
gtcaatgatatagctggagaaatcgccacattaaccaacgatttcagattcggactcggg
acgtctatggacaaagtcatcatgccctttaccagaactgatcctcgaagtgtggaattt
ccctgtggggatgtcgctatctactgtgaccaaccatactctttcattcatcgacaacct
ctcactcgaaacattcaaaactttagggccgctctaagtcgcgtgaacacaaccgctaat
actgacatcacagaaggactgtttgacggactgatgcaagtcatggtttgtggtgatcga
ataggatggaggaggaaatctagacgaatggttatcttcgccactgacatcaatttccat
caagcaggcgacgggaggttttctggaattctagaaccaaatgattgtttgtgtcaccta
gatagcaatgggaaatatacaaaggcagaaattcaggattatccatctgttggacaaatc
ttacaaaaagcacgtgaaaacaacataaacgtcctgttcgttataggcggtgaagacaat
gcttatgttagaagggtctattatgacaatttggctgctttccttcctggcggtatagac
aaagcctctgcgctgaacacggatgcttccaacattctcagaattgttggcgatagtttt
aggcgccttcgcgatactgtgaaattagtgacaagcagtcttccagaggagctggtactg
accctgtacaccgactgcaacaccaacgggcgactcaacgattcaacaaatatttgcaca
aatctgacattggataaaacggcaaacttcatcgcttatatacaatcaaacctgacagag
tgccctgataaaaacaccttcactttcaccatcttccctgagggtctggaggagcgggtg
aacgttgactttgaacacgtgtgtgactgcgactgtcaacttgaacctgaggcggaacca
cgtagtcctaagtgtaacgggagagggcgctacgaatgtggaacatgtatctgtgacgat
ggatggtttggggagacctgcgactgtgacgggaggggtactgaaaccgaggcttgcggc
acagaatcaggaatttgtaacggtgccggaaactgtacctgccggaagtgtgactgttta
cctggatacagcggagaaaaatgtgaatgtaatgaccagaactgtcgttcacataacgga
ttgctgtgtggaggtccagcccatggcagatgtgtttgtggagaatgtgtttgcaatgct
aattatactggagatgcgtgtgactgtacgacgataactgatacatgcagagataagaac
gggaccctgtgctcagataatggtgattgtgagtgtgggagatgtcgctgtaacgtggga
tatagaggacccgtgtgtagacggtgtcagaattgtcctgggacttgtgaaaataacaac
gactgtgtagaatgcatcggatttaaacagggacgctacaacgaaactacatgcaatcgg
aaatgtcgaaacgtagaaactgtacctcttctggaagaggcgtccatcgacaatggaacc
tctgtaacagtttgtgttctacaagacgaatttggatgcattataaactttaacgtccat
gaccttgagatgggacaaaggatactaatcaagtctactaaaagatgtccccctagccct
ccagatccactgacaataggactcagtctctccggggccatctttctgataggtcttctg
cttctagtcatctggaaaatcttgacaatgttatacgacagcatggaatactcaaagttc
gaatcagaaattcagaatccagcctgggaacagtccgaaaatccaatttacaaagagtgt
gtaacaacggttcaaaaccctttgcacgataccgaaggaaatggaaattcaggtttttga
DBGET
integrated database retrieval system