Ostrea edulis (European flat oyster): 125678016
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Entry
125678016 CDS
T09123
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03266
Virion - Herpesvirus
oed04081
Hormone signaling
oed04145
Phagosome
oed04148
Efferocytosis
oed04512
ECM-receptor interaction
oed04517
IgSF CAM signaling
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
125678016
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
125678016
04512 ECM-receptor interaction
125678016
04517 IgSF CAM signaling
125678016
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125678016
04148 Efferocytosis
125678016
09142 Cell motility
04820 Cytoskeleton in muscle cells
125678016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125678016
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125678016
04515 Cell adhesion molecules [BR:
oed04515
]
125678016
04090 CD molecules [BR:
oed04090
]
125678016
Membrane trafficking [BR:
oed04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125678016
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125678016
Cell adhesion molecules [BR:
oed04515
]
Integrins
Integrin beta subunits
125678016
CD molecules [BR:
oed04090
]
Proteins
125678016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_Teneurin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
125678016
NCBI-ProteinID:
XP_056008348
LinkDB
All DBs
Position
10:27928872..27967992
Genome browser
AA seq
823 aa
AA seq
DB search
MFFKTVHIGVLLIFYLASVQSQSCSGKRCGDCLIFEGCAWCKDPEYSFNRCATESQTTSN
GCRQVVRRGSHGVQIIRNNEFSDGGPGMEPVQIKPQRVKIKLVPNILFRNLQVFYKIARN
FPLDLYFLNDPSYTMKALIARLNALAYDIADEIAKLTTDFRFGLGTAMDKVIWPFTRVDP
LFLAYPCGSPSIQCDKPYSFLHRQSLTSNITKFKSTLLAVENAVNDVNTTANQDITEGLF
DGLMQVMVCGDRIGWRKKARRMVIYATDINFHQSGDGRFANILEPNDGLCHLNDAGKYTM
AEIQDYPSVGQIVQKARENNINIIFVIGGNDNTAVRSLFYDSLAAILPGGINNASALSPD
ASDILSIVGNNYRRLRETVKIVTSGVPEELIMGLYSNCKTGGRTLDRTDTCTGLTIDKWA
NFTVYLVSNLTVCPEKRDFIFTLFPEGLEERVEIEVEHVCECKCQLEPEAEPNSTKCNNQ
GTYECGVCHCNVGWSGDTCECDERGTEAEACGTDSGICNNAGNCTCGRCECFDGYSGDRC
ECNDLDCPSDNGLLCGGPDHGQCSCGASSSVLCICKGPDHGQCSCGACVCNSTYTGEVCD
CSTSADSCRDNNGTICTGNGNCECGKCRCEVGFRGDVCDRCQHCPGICENNNNCVECVGF
NQGPFNTTDCSEKCQNVEVVSLLQDSAGENETSTSCTLQDNSGCLIEFNVYDSDGGQYVK
VKSWKRCPPGPADPLTVGLGLSGAIFLVGLLLLLIWKLLTMLYDKMEYSKFESEIQNPAW
EKSENPIYKECVTTVQNPLHDAECIKDPEGLVNNEEEKILKDA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaagaccgtgcatattggagttcttttaatcttctatttagcatcagtccag
tcccaatcgtgctcggggaaacggtgtggcgactgcttgattttcgagggatgtgcctgg
tgcaaagacccggaatattccttcaatcgttgtgcaacagagagccaaacaactagtaat
ggatgtagacaggttgtcaggaggggctcccacggggtgcagatcatcaggaataatgag
ttctcagatggtggaccaggaatggagccagtacaaataaaacctcaacgggtgaagata
aagctggtaccaaacatcctgtttcgtaatctccaggtcttctacaagattgcaaggaac
tttccgctcgacctttacttcctgaatgatccgtcgtatacaatgaaagcattaatagcg
agactcaatgcactcgcttacgacatagctgatgaaatagccaaactcacaaccgatttc
agatttggacttgggacagcaatggataaagttatatggccatttacccgtgtagaccct
ttatttctagcctatccctgcggctccccatccatccagtgcgacaaaccatactccttc
ctccatcgacaatccttgaccagtaacataacgaagttcaagtcgaccttgttagctgtt
gagaacgctgttaatgacgtaaatactactgccaatcaagatattacagaagggctgttt
gatggactgatgcaagtaatggtttgtggggatagaatagggtggaggaaaaaggccaga
cggatggtgatctacgccacagacataaacttccaccagtcgggggacggcaggtttgca
aatattttggaaccaaatgatggtctatgtcatctgaatgatgctggcaaatatacaatg
gctgaaattcaagattatccgtcagtcggacaaatcgtacaaaaagcacgtgaaaacaac
atcaacataatcttcgttattggaggaaatgacaatactgctgttcggagtttgttttat
gatagtctggccgccattttacctggaggaatcaataatgcttccgctctctccccggac
gcctccgatattctgagtattgttggaaacaactacaggcgtcttcgtgaaactgttaaa
atcgtcacgagtggggttccagaggagctgatcatggggctgtattctaactgtaaaaca
ggaggacgtacactcgataggaccgacacatgcacaggcctgaccattgacaaatgggcg
aattttacagtgtatctagtatccaatttgacagtttgtcctgagaaaagggactttatc
ttcaccctttttcctgagggtctggaggaaagagttgaaatagaagtggagcatgtctgt
gaatgtaaatgtcaactggaaccggaagcggaaccaaacagtactaaatgtaataatcaa
gggacgtacgagtgtggcgtttgtcattgtaatgtcggatggtcgggggacacatgcgaa
tgcgacgaaagaggaacggaagcggaggcctgcggcacggattcaggaatatgcaacaat
gccggaaactgcacctgcggaagatgtgagtgttttgacggatacagtggggaccgatgt
gaatgcaatgacctggattgcccttcagataatgggctgttatgtggaggtccggaccac
ggacaatgttcctgtggagctagctctagcgtattgtgtatttgtaaaggtccggaccac
ggacaatgttcctgtggagcttgtgtctgtaactccacgtacacgggggaggtctgtgat
tgttccacgtctgccgactcctgcagagataataatgggactatatgtaccggtaatgga
aactgcgagtgtggaaagtgtcgctgtgaggtcggatttagaggggatgtttgtgatcga
tgccagcactgcccgggtatttgtgagaacaacaacaattgtgtggaatgtgttggattc
aatcaaggtccattcaacacaacggactgtagcgaaaaatgccagaacgtcgaagttgta
tcccttttacaagattctgctggagaaaacgagacgtcaacaagctgtactctgcaggac
aattccgggtgtcttattgaattcaatgtttatgattctgatggaggacaatatgtgaaa
gtcaagtcttggaaacgctgccctcccggacctgcagatcctctcacggtcggactaggt
ctgtcaggcgctatattccttgtggggttactactccttttgatctggaagcttctgacg
atgttatatgataaaatggagtactccaaatttgaatcagaaatccaaaatccagcttgg
gaaaagtccgaaaatcctatttacaaagagtgtgtaactacggtgcaaaatcctctacat
gatgcagaatgcattaaagatccggagggtttggtcaacaacgaggaggaaaagatcttg
aaagacgcatga
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