KEGG   Ostrea edulis (European flat oyster): 125678016
Entry
125678016         CDS       T09123                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03266  Virion - Herpesvirus
oed04081  Hormone signaling
oed04145  Phagosome
oed04148  Efferocytosis
oed04512  ECM-receptor interaction
oed04517  IgSF CAM signaling
oed04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    125678016
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    125678016
   04512 ECM-receptor interaction
    125678016
   04517 IgSF CAM signaling
    125678016
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125678016
   04148 Efferocytosis
    125678016
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125678016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oed04131]
    125678016
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oed04147]
    125678016
   04515 Cell adhesion molecules [BR:oed04515]
    125678016
   04090 CD molecules [BR:oed04090]
    125678016
Membrane trafficking [BR:oed04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    125678016
Exosome [BR:oed04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125678016
Cell adhesion molecules [BR:oed04515]
 Integrins
  Integrin beta subunits
   125678016
CD molecules [BR:oed04090]
 Proteins
  125678016
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_Teneurin I-EGF_1 EGF_2 EGF_TEN
Other DBs
NCBI-GeneID: 125678016
NCBI-ProteinID: XP_056008348
LinkDB
Position
10:27928872..27967992
AA seq 823 aa
MFFKTVHIGVLLIFYLASVQSQSCSGKRCGDCLIFEGCAWCKDPEYSFNRCATESQTTSN
GCRQVVRRGSHGVQIIRNNEFSDGGPGMEPVQIKPQRVKIKLVPNILFRNLQVFYKIARN
FPLDLYFLNDPSYTMKALIARLNALAYDIADEIAKLTTDFRFGLGTAMDKVIWPFTRVDP
LFLAYPCGSPSIQCDKPYSFLHRQSLTSNITKFKSTLLAVENAVNDVNTTANQDITEGLF
DGLMQVMVCGDRIGWRKKARRMVIYATDINFHQSGDGRFANILEPNDGLCHLNDAGKYTM
AEIQDYPSVGQIVQKARENNINIIFVIGGNDNTAVRSLFYDSLAAILPGGINNASALSPD
ASDILSIVGNNYRRLRETVKIVTSGVPEELIMGLYSNCKTGGRTLDRTDTCTGLTIDKWA
NFTVYLVSNLTVCPEKRDFIFTLFPEGLEERVEIEVEHVCECKCQLEPEAEPNSTKCNNQ
GTYECGVCHCNVGWSGDTCECDERGTEAEACGTDSGICNNAGNCTCGRCECFDGYSGDRC
ECNDLDCPSDNGLLCGGPDHGQCSCGASSSVLCICKGPDHGQCSCGACVCNSTYTGEVCD
CSTSADSCRDNNGTICTGNGNCECGKCRCEVGFRGDVCDRCQHCPGICENNNNCVECVGF
NQGPFNTTDCSEKCQNVEVVSLLQDSAGENETSTSCTLQDNSGCLIEFNVYDSDGGQYVK
VKSWKRCPPGPADPLTVGLGLSGAIFLVGLLLLLIWKLLTMLYDKMEYSKFESEIQNPAW
EKSENPIYKECVTTVQNPLHDAECIKDPEGLVNNEEEKILKDA
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgttctttaagaccgtgcatattggagttcttttaatcttctatttagcatcagtccag
tcccaatcgtgctcggggaaacggtgtggcgactgcttgattttcgagggatgtgcctgg
tgcaaagacccggaatattccttcaatcgttgtgcaacagagagccaaacaactagtaat
ggatgtagacaggttgtcaggaggggctcccacggggtgcagatcatcaggaataatgag
ttctcagatggtggaccaggaatggagccagtacaaataaaacctcaacgggtgaagata
aagctggtaccaaacatcctgtttcgtaatctccaggtcttctacaagattgcaaggaac
tttccgctcgacctttacttcctgaatgatccgtcgtatacaatgaaagcattaatagcg
agactcaatgcactcgcttacgacatagctgatgaaatagccaaactcacaaccgatttc
agatttggacttgggacagcaatggataaagttatatggccatttacccgtgtagaccct
ttatttctagcctatccctgcggctccccatccatccagtgcgacaaaccatactccttc
ctccatcgacaatccttgaccagtaacataacgaagttcaagtcgaccttgttagctgtt
gagaacgctgttaatgacgtaaatactactgccaatcaagatattacagaagggctgttt
gatggactgatgcaagtaatggtttgtggggatagaatagggtggaggaaaaaggccaga
cggatggtgatctacgccacagacataaacttccaccagtcgggggacggcaggtttgca
aatattttggaaccaaatgatggtctatgtcatctgaatgatgctggcaaatatacaatg
gctgaaattcaagattatccgtcagtcggacaaatcgtacaaaaagcacgtgaaaacaac
atcaacataatcttcgttattggaggaaatgacaatactgctgttcggagtttgttttat
gatagtctggccgccattttacctggaggaatcaataatgcttccgctctctccccggac
gcctccgatattctgagtattgttggaaacaactacaggcgtcttcgtgaaactgttaaa
atcgtcacgagtggggttccagaggagctgatcatggggctgtattctaactgtaaaaca
ggaggacgtacactcgataggaccgacacatgcacaggcctgaccattgacaaatgggcg
aattttacagtgtatctagtatccaatttgacagtttgtcctgagaaaagggactttatc
ttcaccctttttcctgagggtctggaggaaagagttgaaatagaagtggagcatgtctgt
gaatgtaaatgtcaactggaaccggaagcggaaccaaacagtactaaatgtaataatcaa
gggacgtacgagtgtggcgtttgtcattgtaatgtcggatggtcgggggacacatgcgaa
tgcgacgaaagaggaacggaagcggaggcctgcggcacggattcaggaatatgcaacaat
gccggaaactgcacctgcggaagatgtgagtgttttgacggatacagtggggaccgatgt
gaatgcaatgacctggattgcccttcagataatgggctgttatgtggaggtccggaccac
ggacaatgttcctgtggagctagctctagcgtattgtgtatttgtaaaggtccggaccac
ggacaatgttcctgtggagcttgtgtctgtaactccacgtacacgggggaggtctgtgat
tgttccacgtctgccgactcctgcagagataataatgggactatatgtaccggtaatgga
aactgcgagtgtggaaagtgtcgctgtgaggtcggatttagaggggatgtttgtgatcga
tgccagcactgcccgggtatttgtgagaacaacaacaattgtgtggaatgtgttggattc
aatcaaggtccattcaacacaacggactgtagcgaaaaatgccagaacgtcgaagttgta
tcccttttacaagattctgctggagaaaacgagacgtcaacaagctgtactctgcaggac
aattccgggtgtcttattgaattcaatgtttatgattctgatggaggacaatatgtgaaa
gtcaagtcttggaaacgctgccctcccggacctgcagatcctctcacggtcggactaggt
ctgtcaggcgctatattccttgtggggttactactccttttgatctggaagcttctgacg
atgttatatgataaaatggagtactccaaatttgaatcagaaatccaaaatccagcttgg
gaaaagtccgaaaatcctatttacaaagagtgtgtaactacggtgcaaaatcctctacat
gatgcagaatgcattaaagatccggagggtttggtcaacaacgaggaggaaaagatcttg
aaagacgcatga

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