Osmerus eperlanus (European smelt): 134009568
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Entry
134009568 CDS
T10927
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04141
Protein processing in endoplasmic reticulum
oep04210
Apoptosis
oep04217
Necroptosis
oep04218
Cellular senescence
oep04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134009568
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134009568
04217 Necroptosis
134009568
04218 Cellular senescence
134009568
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134009568
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134009568
Enzymes [BR:
oep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
134009568
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C2: calpain family
134009568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_6
DUF5672
Motif
Other DBs
NCBI-GeneID:
134009568
NCBI-ProteinID:
XP_062305087
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Position
23:complement(1543791..1559142)
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AA seq
699 aa
AA seq
DB search
MPPPGVCLNIMKERHKKDGRGSLDNPLKFLNQDFEQMKQYCIAREVRFVDDMFPPDHNSI
GEGLLSPSDMGRVQWLRPHKIAQNPSFIVDGISRFDFGQGMVGNCWFLASIGALTFQKHF
LEQIMPLNQSFQQEYCGIFHFRFWRFGKWEDVLIDDKLPTVDGRLIFVHSKTPNEFWPAL
MEKAYAKVCGSYADMNAGTPSEALVDFTGGIHLCIQLAEAPSNLWDLMSRAAQSKSLMGC
GTPQGETSANTVAENGLVRGHAYTVTGVTELTRNGRPVKLVRLWNPWGRVEWNREWSDKS
PLWQTVSLKDRLKCLSVKDDGEFWMTIEDFCSNYSDLDICSLCPDFLDGNASCHWGCSVH
DGRWLAGTTAGGCLNYRDSFWTNPQYRLKIEGLDEDCAEKQGEKNMLVSLMQKPDKRNRR
LVKTLHIGFSIFEVPEQYKRLEGKFPTSFFATNAPVGQSKNYLNAREVMELFRLKPGEYL
IVPSTFKPNETASFILSILSKAETNIHENSDGHDHMEVTKPKPMENEDNEDNKNKKTLFR
QYSDKYEEVDAELLQKILNDNVLKGQTNNGGFSLDSCRSMVALMDTSITGKLNSAEFLRL
LRKVNMFQDIFFATDVSLTGTLSLSELRNAIMASGMTVSDGMLNLMAVRYGGSSGNMSLE
SFISLVLRLDCMAKIFRQLSEGSTMSLQESEWMYMSMYT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctggtgtgtgtctaaatatcatgaaagagcgccacaagaaagatggccgt
ggtagccttgacaaccccctgaaattcctcaaccaagactttgaacagatgaagcagtac
tgtattgctcgggaggttcgctttgtcgatgacatgtttcccccagaccataattcaatt
ggcgaaggactactgtccccctccgacatgggaagagtgcagtggttgaggccacataaa
attgctcagaatccctcttttattgttgatggaatttcaagatttgattttgggcaaggc
atggttggtaactgctggttccttgcctccattggggcactgacattccaaaagcatttc
ctggaacaaatcatgcctctcaatcaatcatttcaacaagaatattgtggaatattccat
ttcaggttctggaggttcggaaagtgggaggatgttttgattgatgacaagcttccgaca
gttgatggcaggctcatttttgtccattccaaaactccaaatgagttctggcctgctttg
atggagaaggcctacgccaaagtttgtggctcctatgcagacatgaatgcagggacgccc
tctgaggctttggtggattttactggcgggatccacttgtgtatccagcttgcagaagcc
ccttctaacctatgggatctaatgtctagagctgcccaatcaaaatcgctgatggggtgt
ggtactcctcaaggggaaacatcagccaacaccgttgcagagaacggattagtgaggggc
catgcatacactgttacaggtgtcactgagctcacgagaaatggaagaccagtgaagctg
gtgcgtctgtggaacccctggggcagggtggaatggaacagggagtggagcgacaagtcc
cccttgtggcagaccgtgagtcttaaggatcgtctgaaatgtctctcagtgaaggatgac
ggagaattctggatgacaattgaggatttctgcagcaactactcagatttggatatctgc
tctctgtgccctgacttccttgatggaaatgcatcatgtcactggggttgttccgtccat
gatggcagatggcttgctggaactactgctggtggatgtttaaattatcgagacagtttc
tggacaaaccctcagtatcggttaaagattgaaggtctggatgaggattgtgctgagaaa
caaggggaaaaaaacatgctggtctctctgatgcagaagcctgacaagcgaaacagacgc
ctggttaaaaccctccacattggattctccatttttgaggtgcctgaacaatacaagcgt
ctagaaggaaagttcccaacatctttctttgccaccaatgcacctgtgggtcaatccaag
aattatctaaatgctcgtgaagtcatggagctgttccgtctgaagcctggtgaatatctg
atcgtgccatccaccttcaaaccgaatgaaacagcatctttcatcttgtccatcctttcc
aaggcagagaccaacatccatgaaaattctgatggtcatgaccacatggaagtcacaaag
cccaaaccaatggaaaatgaagacaatgaagacaataaaaacaagaaaacgctttttcgc
caatactctgacaagtatgaagaagtggatgctgagttgcttcaaaagattttgaacgac
aatgttcttaagggacaaacaaacaatggtggcttcagcctagattcctgtcgaagcatg
gttgctctgatggatacatccatcactggaaaactgaacagtgcagaattcctccgtctg
ttgaggaaagtgaacatgttccaggacatcttctttgcaacggatgtctccctcactgga
actttatcattgagtgaactgagaaatgcaatcatggcttcaggaatgacggtcagtgat
ggcatgttgaacctgatggccgtacgctatggtggctcgtctggaaacatgtccctggaa
agcttcataagcctggtccttcgcctggactgcatggccaaaatattccggcagctttct
gaaggatcaaccatgtctcttcaggaatctgagtggatgtatatgtcaatgtatacataa
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