Osmerus eperlanus (European smelt): 134013116
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Entry
134013116 CDS
T10927
Symbol
si:ch211-129c21.1
Name
(RefSeq) semaphorin-4E
KO
K06521
semaphorin 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134013116 (si:ch211-129c21.1)
CD molecules [BR:
oep04090
]
Proteins
134013116 (si:ch211-129c21.1)
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GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_3
Ig_2
I-set
V-set_CD47
Ig_5
Motif
Other DBs
NCBI-GeneID:
134013116
NCBI-ProteinID:
XP_062308882
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Position
26:complement(8441230..8447103)
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AA seq
808 aa
AA seq
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MSALWPLKVLCGLFLPLSISEHVSLHCVPRKTVPYQEGLKVFREEGIWNYSTMLMREDLG
VLMLGAREAVYALDMNDVSTKNAGVYWGVTPDKQRECTYKGKDAEVECRNYIRTLHTVAG
DRMYVCGTNAFSPICDYMTYSDGVLTLEGLQEEGKGKCPFDPFQRYSSIMIGEDLYSATS
INFLGSEPVVLRSTKTTLRTEFKSSWLNEPNFVYMDFVPESQSSDTGDDDKVYMFFSENA
MEYDFYNKLLVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSVPGPSLPSIVQDVFLLK
NDDWRKSVFYAVFTPQSPTSDVSAVCAYSTSDISHVFDEGKFKTPVTVETAHVKWVMFSG
ELPVPRPGACINNAAREQGMMRSLDLPDKTLQFIRDRPLMDEAVSPLMGRPLLVRKGAMF
TRIAVDTVRALDGETYPVMFIGTENGFVEKAVNYAGEMFIIEEIRLYKTPEPIRTLRLSS
SKGQLYAGSGYGVVQLPLSDCGRYRSCVDCILARDPYCAWDLPSDRCSPVPRPQPPSGGD
MIQSLQHGDISQCPSPDEVTVETYTLVSGHHVKLQCRPDSNLAQVSWHFSGQVLHSDDKR
YIYDGGLLILNASSPDAGRYTCDSVEQVAGRPYTKTMAVYEVQPRAQPGWEEEEEQGETT
ETPHSAFTPSPERPVPTQPIETPLTPQSYREAERLVGLKVAVVLLSLFLGATVAWNLKGR
CRRFLPQKAGAGQGKAPSSDYVDSTRTTEQKLLPPSSITTNTTTNITTNSKNNNRAHVDI
QRNGELLFSGRHVSSADGLGFINDESEI
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctctggcctctcaaggttctctgcggcctgttccttcctctgtccatcagt
gagcatgtcagtctccactgtgtccctcggaagaccgtcccctaccaggaaggtctgaag
gttttcagggaggaggggatctggaactactccaccatgctgatgagggaggatctgggc
gtgctcatgctcggggcgcgcgaggcagtctacgccctcgacatgaacgacgtctccacc
aagaacgccggggtgtactggggagtcacgccagacaaacagagggagtgcacgtacaag
ggcaaagacgcggaagtggaatgtcgtaactacatacggactctccatactgtggctggc
gaccgaatgtatgtgtgtggcacgaatgccttcagtcccatctgtgactatatgacctac
agcgacggggtgctgactctggaggggctgcaggaggaggggaaagggaaatgtcccttt
gatcccttccagaggtactcctccatcatgattggtgaagacttgtactctgccacctcc
atcaacttcctgggctctgagccagtggtgctccgcagcactaagacgacactccgcacc
gagtttaagagctcctggctcaacgagccgaactttgtctacatggactttgtccccgag
agtcagagcagcgacaccggcgacgacgacaaggtctacatgttcttcagcgagaacgcc
atggagtacgacttctacaacaagctgctggtgtctcgcgtggcccgcgtctgcaagggg
gacatgggaggccagcggacgctgcagaggaagtggacgtcgttcctgaaggctcgtctg
gactgctccgtgcctgggcccagcctgccctccattgtccaggacgtcttcctgctgaag
aacgacgactggaggaaaagcgtgttctacgccgtgttcacgcctcagtcgcccacctca
gacgtctcggcagtgtgcgcgtacagcacctctgacatcagccacgtgttcgacgagggc
aagttcaagacgcccgtgactgtggagacggcccacgtgaagtgggtgatgttcagtgga
gagttgcccgtccccagacctggagcttgcatcaacaacgcggccagggagcaggggatg
atgcgctcgctggacctgcctgacaagaccctgcagttcatccgggaccgaccgctcatg
gacgaggcggtgagcccgctgatggggcgccccctactggtcaggaagggagccatgttc
acgcgcatcgcggtggacacggtacgagcgctggatggagagacgtatcccgtcatgttc
atcggcacggagaacggctttgtggagaaggcggtgaactacgccggggagatgttcatc
atcgaggagatccggctgtacaagactccagaaccaatcaggactctgcgtctctcctcc
agcaagggccagttgtatgcaggttcggggtacggtgttgtgcagctacctctgagcgac
tgtgggcgctaccggtcgtgtgtggactgtatcctggccagagatccctactgtgcctgg
gacctcccctctgatcgctgctcaccagtccccagaccgcagcctccctcgggcggtgat
atgattcaaagtctacaacatggtgatatctcacagtgcccaagtccagatgaggtcacc
gtggagacgtataccctggtgtccggccaccacgtcaagctgcagtgccggccagactcc
aacctggcccaggtcagctggcatttctccggccaggtccttcactccgatgacaagcgc
tacatctacgacgggggcctcctcatcctcaacgcctcctccccggacgccggacgctac
acgtgcgactctgtagagcaggtggccggccgaccgtacactaagaccatggccgtgtac
gaggtgcagcccagagcgcagccaggctgggaggaagaggaggagcagggggaaacgacg
gagactccacacagcgccttcaccccatccccagaacgcccggtccccacacagcccata
gagacacctttgacccctcagtcttacagggaggcagagcgtctggtgggtctgaaggtg
gctgtggttctgctctctctgtttctgggcgccacggtggcgtggaacctgaaaggacgt
tgtcgccgcttcctcccacaaaaagcaggcgccggccagggaaaagccccgtcttcagac
tacgtggattctaccaggactactgagcagaagctgctgccaccgtcatccatcaccacc
aacaccaccaccaacatcaccactaattctaaaaacaataaccgcgcgcacgttgacatt
caaaggaacggggagctcctcttctcgggcaggcacgtttcaagtgcggacggtttggga
ttcatcaatgacgagtctgagatctga
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