Osmerus eperlanus (European smelt): 134020621
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Entry
134020621 CDS
T10927
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134020621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134020621
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
134020621
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF3915
Motif
Other DBs
NCBI-GeneID:
134020621
NCBI-ProteinID:
XP_062316762
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Position
5:6074170..6081728
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AA seq
652 aa
AA seq
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MIPLWCKHPVTPTAGSPASPPAPAPAVPAPPPAPPEEPKEEEEGKAPSGGPGQEEHTRAG
LCCKVTAPRRLRSLLQYRLPASIDPFTNLVYVLWLFFVTLAWNWNVWLIPVRCAFPYQTP
GNIHMWLTMDYLCDLLYILDMLLFKPRLQFIRGGDIVCDQKDMRKNYMKTTRFKLDVASL
LPLELFYFKIGINPILRVPRLLKIMSFFEFNERLEAILTKAYIYRVIRTTSYLLFCLHCN
ACLYYWVSDYEGLGSTKWVYNGEGNSYIRCYYYAVKTLITIGGLPDPTTLSEIIFQLINY
FVGVFAFSIMIGQMRDVVGAATAGKTHYRACMDNTVKYMASYRIPREVQNRVKTWYNYTW
QSQGMLDEQELLSQLPDKMRLDIAVDVNYSIVSKVALFQGCDRQMIFDMLKRLRSVVYLP
GDYVCKKGEVGREMYIIKAGEVQVVGGPDGRTVFVTLRAGSVFGEISLLAIGGGNRRTAN
VIAHGFANLFILDKKDLNDILVHYPESQKLLRRKARKMLTKDKKPAEAKPEAKVSLPPPR
AGTPKLLKAALEMTGKSGFRGTLAKMKERANKSISPQPSISTSLPTPSPISTLAPEPDRP
PATPSLNSNSSMMLGTQGDDTLSSDKDPEDTEHEEGRDEAAKGGKKREKKKI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatccctttgtggtgcaaacacccagtcacacccacagctggaagccccgcctcaccc
ccagccccagcacccgccgttccagctcctcctcctgcacctccagaggagccgaaggag
gaggaggagggcaaagcgccctctggtggccctgggcaggaggagcacactagggctggg
ctctgctgcaaggtgaccgctcctcgaaggctacgatccctgctacagtaccgcctccct
gctagcatcgaccccttcaccaacctggtgtacgtgctgtggctgttcttcgtgaccttg
gcctggaactggaatgtctggctgatcccggtgcgctgtgcgttcccataccagactccc
ggtaacatccacatgtggctgaccatggactacctgtgtgacctgctctacatcctggac
atgcttctctttaagccgcggttgcagttcatccgcggcggggacattgtgtgtgaccag
aaggacatgagaaagaattacatgaagaccacgagattcaagttggatgtggccagtctt
cttcccctagagttgttctacttcaaaatagggataaaccctatcctccgtgtcccacgc
ctactaaagatcatgtctttcttcgagttcaacgagcgtctggaggctatcctgaccaaa
gcctatatctacagagtgatccggacaaccagctacctgctgttctgcctgcactgtaac
gcctgtctgtactactgggtgtctgactacgagggcctgggttccactaagtgggtttac
aatggcgagggaaacagctatatccgttgctactactatgctgtgaagaccttgatcacc
atcggcggtcttccggatccaaccactctgtcagagatcatcttccagctcatcaactac
tttgttggagtgtttgccttctccatcatgattggacagatgcgtgacgtggttggtgcc
gcgacggcgggaaagacgcactaccgtgcctgcatggacaacaccgtgaaatacatggcc
tcataccggatccccagagaggtgcagaaccgtgtgaagacatggtataactacacctgg
cagtcccaaggcatgctggatgaacaggagcttctgtcacagctgccagataagatgcgt
ctggacattgcggtggacgtcaactactccatcgttagtaaggtggctctcttccagggt
tgtgacagacagatgatctttgacatgctgaaaagacttagatctgttgtctacctgcct
ggggattatgtctgcaaaaagggggaggtgggccgagagatgtacatcattaaagcagga
gaggtgcaggtggtgggggggccagatggaaggactgtgttcgtcacactcagggcgggg
tccgtgttcggagagatcagtttgctggcgattggtggtggaaacaggcgaacagccaat
gtgattgctcacggctttgctaaccttttcatcctggacaagaaggacctgaacgatatt
ctggttcactacccagaatcccaaaagcttctcaggaggaaggcccgtaaaatgctgacc
aaggacaaaaagccagccgaagcaaagccagaagctaaagtctccctccccccgccccgg
gcagggacccctaagctgctgaaagctgctctggagatgacagggaagtctggcttcaga
ggaaccctggccaagatgaaggaaagggccaacaagtccatctcaccgcagccctccatc
tccacctccctgcccaccccctctcccatctccaccctcgcccctgagcctgaccgcccc
cctgcgaccccctccctgaactccaacagctccatgatgcttggcacccagggagatgac
actttatcctcggacaaggacccagaagacacagagcatgaagaagggagggatgaggca
gcaaaaggagggaagaagagagaaaagaagaagatatga
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