Osmerus eperlanus (European smelt): 134021125
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Entry
134021125 CDS
T10927
Symbol
sema4ba
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba
KO
K06521
semaphorin 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134021125 (sema4ba)
CD molecules [BR:
oep04090
]
Proteins
134021125 (sema4ba)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Sema4F_C
Fe-S_biosyn
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
134021125
NCBI-ProteinID:
XP_062317614
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Position
5:11599406..11645569
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AA seq
836 aa
AA seq
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MWTISMASLCVPALTLLLTAFVHPAAPQHDVTPRLSFSYNAKERSAKRFSSDGVFNYTSI
LLSKEDNMLYVGAREVLFALNLTDIGRAELQRNLTWSTPQSKRDECGFKGKNLQIDCFNY
VKILLRLNSTHLYVCGTYAFSPICVHINTADFSLVRSQTGEIVTEDGRSRCPFNPEYKST
AIMAEGELYTGTVSNFQGNEPIIYKSLGHGTSLKTENSLNWLQDPAFVGSAYIQESLPKG
NPVGNDDKIYFFFSEAGKEFDFFDNTIVSRIARVCKGDKGGERVLQKKWTTFLKAQLLCS
LPDDGFPFNIIQDMFVLTPSPEDWKNTMFYGVFTSQWYKGASGSSAVCAFTMDQVERAFN
GRYREVNRETQQWYTYNHPIPEPRPGACITNAAREQGIPSSLHMPDKVLNFVKDHFLMDS
VIRSQPLLLKRSVRYTQIAVHRVQTRHKAYNVLFIGTDDGRLHKAINVNNKMHIIEEMVL
FSEPQPVQHMELDSEKGTLYVSSYSGLVEVPVANCTNYQSCGECVLSRDPYCAWMGRQCL
DIRQAPPESYWQQDVDEADTSVICNKSVLNPRSAKPPPTRMSSCQVILIPANTFKVLPCK
LRSNLAERKWEYSEGAGHFLYPSPEGGLVVVAHADRQEIYECWSVEEGFRQLLANYCVRG
EARQESTTLIGRSRTPMVPQEEPIILPGEARSPQMNTKTYWNELIVVCALLAFSLVVFSL
FVVYRNRDRMKSMLKEGECPNMQQKKPRIVGKPAENLPLNGTTVPASVSDHKGYQTLNDN
YICSTPPHECSSPDNSKSFSESEKRPLNLKDSHVEISPTCPRPRVRLGSEIKDSIV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaataagtatggcctcactctgtgtaccggccctgacgctcctactgactgcc
tttgttcacccagctgcgccccaacacgatgtcactcctcgcctcagcttctcctacaat
gcaaaggagaggtcagccaaaagattctcttcagatggcgtcttcaattacacttctatc
ctcctcagcaaggaagataacatgctctatgtcggagctagagaggttctctttgctctc
aacctcactgatatcggcagagccgagctccaaaggaatctgacatggagcacgccacag
agcaagagagatgagtgcggtttcaaaggcaaaaacctacaaattgactgtttcaactac
gtcaagatcttactgcggctgaacagcactcatctatacgtgtgcggaacgtatgccttc
agtcccatctgtgtgcacataaacacagcagacttctccctggtacggagccagacgggg
gagattgtgacagaggacggacgaagccgatgccctttcaacccagagtacaagtccacc
gccatcatggccgagggtgagctgtacactggtacggtcagtaatttccaggggaatgaa
cctatcatttacaagagccttggccatggaacctccctgaaaacagaaaactccttgaac
tggcttcaagacccagccttcgtgggctctgcttatatacaggagagcctgcctaagggc
aacccagtgggcaacgacgataagatttacttcttcttcagtgaagcgggaaaggagttt
gatttctttgacaacaccattgtatcgcgcatcgctcgcgtgtgtaagggcgacaaagga
ggagaaagggttttgcagaagaagtggaccaccttcctgaaagcccagctgctgtgctct
ctgcctgacgacggcttccccttcaacatcatccaggacatgtttgtgttgacacccagc
ccagaggactggaagaacaccatgttctatggagtcttcacttcacagtggtataaggga
gcctcggggagctcggcagtgtgtgccttcaccatggaccaggtggagagggctttcaac
gggcgctaccgtgaggtcaacagagagacacagcagtggtacacatacaaccaccccatc
cctgaaccacggcctggggcgtgcatcacgaacgcagccagagaacagggcatcccctca
tccctgcacatgcccgacaaggtgctgaacttcgtcaaggaccacttcctgatggacagc
gtgatccgcagccagcccctcctgctgaaaagaagcgtgcgctacacccagatagcagtc
caccgcgtccagaccagacacaaggcctacaacgtcctcttcataggcacagatgatggg
aggcttcacaaagccatcaacgtcaacaacaagatgcatatcattgaggagatggtgctg
ttttcggagccccagcctgtgcaacacatggagctggattcggagaaggggactctctac
gtctcctcctactcagggctggtggaggtcccagtggccaactgtaccaactaccagagc
tgtggggagtgtgtcctgtccagggacccgtactgtgcctggatggggagacagtgtctt
gacatcaggcaggctccaccagagagctactggcagcaggatgtggatgaggcagacaca
tcagttatctgtaacaagtcagtccttaacccgcgctctgctaaacctcctcccacacgt
atgtcttcatgtcaggtgatattgataccagccaacaccttcaaagtactgccctgtaaa
ctgcgctccaacctggctgagaggaagtgggagtacagcgagggcgcaggtcacttccta
taccccagccctgagggcggcctggtggtggtggcccatgctgaccgccaggagatctat
gagtgctggtcggttgaggagggctttagacagctgctggccaattactgtgtcaggggc
gaggccaggcaggagagcaccaccctgattggccgatcacgtacccctatggtaccccaa
gaagagcccattatcttgcctggggaagctcgctcgccccagatgaacaccaagacctac
tggaacgagctcattgtggtgtgtgccctcctggctttctccctggtggtcttctccctg
ttcgtggtctacaggaaccgggaccgcatgaaatccatgctcaaggagggcgagtgcccc
aatatgcagcagaaaaagcccaggatagtgggcaagccggcggagaacttacccctgaat
gggaccaccgtgccggcctccgtctcagaccacaagggctaccagaccctcaatgacaac
tacatctgcagcactcccccacacgagtgttcctctccggacaacagcaagagcttctcc
gagtcggagaagaggccgctgaacttgaaggacagccacgttgagatctcgcccacatgc
ccaaggcctcgagttcgactgggctctgagattaaagactccattgtgtga
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