Osmerus eperlanus (European smelt): 134023192
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Entry
134023192 CDS
T10927
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134023192 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134023192 (cnot10)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134023192 (cnot10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
ANAPC3
TPR_12
TPR_14
TPR_19
TPR_8
TPR_7
ARM_TT21
TetR_C_5
Motif
Other DBs
NCBI-GeneID:
134023192
NCBI-ProteinID:
XP_062321072
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Position
7:complement(14569438..14576495)
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AA seq
779 aa
AA seq
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MAENIEQNEAKHDNTSSPGMSDQEKEMAASALEAFTAGNYDVSLKHLQHLQELNKEDYKI
ALNRAIAEFYKSGQTTTSTLNQTLLAMKNQVHTSVEDIDGLDDVENSLLYYNQAIIHYHM
RQYSEAILIGEKLYQFLEPFEKFALAVCFLLVDLYLLTFQSEKALHLLAVLEKLTVQGNN
KNGKGEAGCGGRCRFYIHRDAAVEAADLIQEKLTEMAGGQSTNNTNKDGVNQKAEFVAMI
EAAKSKMHQYKVRAYIQMKSSKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVK
LLNSSNIAEHPGAIKTGECVRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDHTCAQLG
DGSNGQSKKFAGIPMCALLANKRYELLYNCGIQLLHIGRPLAAFECLVEAVQVYHSNPRL
WLRLAECCIAANKGSSEQESKGLPSKKGIVQSIVGQGYHRKIVLASQSTQNTIYSEGQSA
AIPVASMEFAAICLRNGLLLLPEHPQQEGKPNSSSKTSSQSGSTESGSENSDACSGKGQE
GDKFLSAAPSSPLRKQEVENLRCSILACSAYVALALGDNLMALNHAEKLLHQSKLSGSLK
FLGHLYAAEALISMDRISDAITHLNPDNVTDVSLGVSPSEQDLGSDKGDLDPVESSGKQT
PQCYPSTVNSARAMMLFNLGSAYCLRSEYEKARKCLHQAASMVNTKEIPPEAILLGVYLE
LQNGNTQLALQIIKRNQLLPPSLATPSPDTRKKPVPPYQPSTPLQPIQMPSSFTQVQRK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacattgaacaaaacgaagctaaacacgacaacacttcttcccctggcatg
tcagaccaggaaaaagagatggcagcaagcgcactggaagccttcacggctggaaactac
gatgtgtctttgaagcaccttcagcacctgcaggaattgaataaggaggactacaagatc
gctttgaacagagcgatagcagagttctacaaaagtggccagaccaccacaagcaccttg
aatcagacgctccttgcaatgaaaaaccaggtacacacctcagttgaggacattgacggt
ttggatgatgtagagaacagcctgctgtactacaaccaagccattattcactaccatatg
agacagtactctgaagccatcctcattggagagaagctctatcagtttcttgaacctttt
gagaagtttgcgctggcggtgtgcttcttgctggtggacctgtacctcctcacgttccag
tcggagaaggctctgcatctgctggctgtcctggagaagctgaccgtgcaggggaacaac
aagaacgggaaaggagaggcagggtgtggagggaggtgcaggttctacatccacagggat
gctgcagtggaggctgcagacctcattcaggagaagctgacagagatggcaggaggacag
agcaccaataacacaaacaaagatggcgtcaaccagaaggccgagtttgtagccatgatc
gaagctgctaaatccaagatgcaccagtacaaggtacgagcctacatccagatgaagtcc
tccaaggcctgtaaaagggagatcaagtctgtgatgaacacagccgggaattccgctccc
tcactcttcctcaagagcaacttcgagtacctgagaggaaactaccggaaagccgtcaag
ctgctcaacagctccaacatcgcggagcacccgggggccatcaagactggtgagtgcgtg
cgctgcatgttctggaacaatctaggctgcatccattttgccatgggcaaacacaacctg
ggcatcttctacttcaagaaggcgctccaggagaacgaccacacctgtgctcagctagga
gacgggagcaacggccaatctaagaagtttgcaggcatccccatgtgtgcgctgctggct
aacaagcgctacgagctgctgtacaactgtggcatccagctgctgcacatcggacggccc
ctggctgccttcgagtgtctcgtggaggccgtgcaggtgtatcactccaacccccgcctc
tggctaaggctagccgagtgctgcatcgccgccaacaaggggagttcggagcaggagagc
aaggggctccccagtaaaaagggcatagtccagtccatcgtgggccagggctaccatcgt
aaaatcgtcctggcctcccagtccacccagaacactatctacagcgagggccagtcggcg
gccatcccagtggccagtatggagtttgcagccatctgcctgaggaacggcctgctgctc
ctcccagagcacccccagcaggagggcaagcccaacagcagctccaagacctccagccaa
tcaggaagcacagagagcggcagcgagaacagcgacgcctgcagtgggaaggggcaagaa
ggtgacaagttcctgtcagcagccccgtcctctcccctgaggaaacaggaagtagagaac
ctcaggtgctctatcctggcgtgtagtgcctatgtggcgttggcgctgggagacaacctc
atggccctcaaccatgctgagaagctgcttcaccagagcaagctgtccggttccctcaag
ttcctaggtcatctgtatgctgccgaggctctgatctccatggacaggatctcagacgcc
atcacccacctcaaccccgacaacgtgacggacgtgtccctgggcgtgtcgcccagcgaa
caggacctaggttcagacaaaggggatcttgatcctgtcgagtcctcagggaagcaaacc
ccccagtgctaccccagcacggtgaactctgcccgggccatgatgctcttcaacctgggc
agtgcctactgtctgagaagcgagtacgagaaggcccgcaagtgcctgcatcaggcggcc
tccatggtcaacactaaggagattcctcctgaggcgatactactgggggtctacctggag
ctacagaacgggaacacacaactggctctacaaatcatcaaacggaaccagctcctaccc
ccgtcactagccacgccctcccctgacacacggaagaagccggtgccgccctaccagccc
tccacgcccctccagcccatccagatgccctcctccttcacacaagtccagcgcaaatga
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