Osmerus eperlanus (European smelt): 134026430
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Entry
134026430 CDS
T10927
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
oep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134026430
04082 Neuroactive ligand signaling
134026430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134026430
Ion channels [BR:
oep04040
]
Ligand-gated channels
GABA-A
134026430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
134026430
NCBI-ProteinID:
XP_062325164
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Position
9:complement(12590656..12601719)
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AA seq
481 aa
AA seq
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MSTMQVDAVLVLICVCLGGVAGKAAQQRGHKLETYKQSRSRRETSRMEGGGGHKTGSPIL
KRSSDMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMT
LYLRHYWKDERLSFPSTNNQSMTFDSRLAKKIWVPDMFFVHSKRSFIHDTTTENVMLRVH
PDGNVLYSLRITVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDE
KISLSQFLIQKFHTTTKLAYYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWV
SFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIE
YAAVNYLSTVQERKERKLRERLPCTCGIGNPDDMMTDPQITGYTTMEVNATGNYGMPENG
SRQERMLAQVALGDPQVTGQTRNSRGYVNIWIDTHAIDKYSRVIFPGAYALFNIVYWSIY
C
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcaggtggatgctgtccttgtgctgatctgtgtctgtctgggaggggtg
gccgggaaggctgctcagcagaggggtcacaagctggagacctacaaacagagcaggtca
aggagagaaacatccagaatggagggaggaggaggtcacaagacaggaagccctattctg
aagagaagttcagacatgactaaatctccaatgacaaagtcggagcagctgctgaggata
gatgaccatgacttcaccatgaggccagcatttggaggtccccctatcccagtcggagta
gatgtccaggtggaaagcctggacacaatctcagaagtggacatggacttcaccatgacg
ctgtacctgcgccactactggaaggatgagcgcctatccttccccagcaccaacaaccag
agcatgaccttcgacagccggctggccaagaagatctgggtgccagacatgttctttgtc
cactccaagaggtccttcatccacgacaccactacagaaaatgtcatgctgagggtccac
cccgacggaaacgtgctgtacagtttgagaatcacagtcacagccatgtgtaacatggac
ctgagccgcttcccgctggacactcagacgtgttccctggagatagagagctatgcatac
acggatgacgatctgatgctgtactggaagaaagggaacgagtcactaaacacagacgaa
aagatctctctctcccagttcctcatccagaaatttcacaccaccaccaagttggcttac
tacagcagcacaggctggtacaaccgtctgtacattcacttcaccctgcggcgccacatc
ttcttcttcctgctccagacctactttcccgccaccctcatggtcatgctgtcctgggtg
tccttctggatcgatcgcagggccgtgcccgccagggtccctctggggatcaccaccgtg
ctgaccatgtccaccatcatcaccggcgtaaatgcctctatgcccagggtgtcctacatt
aaggctgtggacatctacctgtgggtcagttttgtcttcgtcttcctctccgtcatagag
tacgcagccgtaaactacctctcaactgtacaggagaggaaagagaggaaactaagggag
aggttgccatgtacctgcggcattggcaaccctgacgatatgatgacagacccacagatc
acaggctacaccaccatggaggtcaacgccacagggaattatgggatgccagagaacggc
agccggcaggagcggatgctggcccaggtggcgctgggggaccctcaggtcacaggtcag
acgaggaactccagaggatatgtcaatatctggattgacacccacgccatagacaagtac
tccagggtcatcttcccaggggcctacgctctcttcaacatcgtctactggtccatctac
tgctaa
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