Osmerus eperlanus (European smelt): 134027651
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Entry
134027651 CDS
T10927
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04514
Cell adhesion molecule (CAM) interaction
oep04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134027651 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134027651 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134027651 (cdh5)
04090 CD molecules [BR:
oep04090
]
134027651 (cdh5)
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Major cadherins
134027651 (cdh5)
CD molecules [BR:
oep04090
]
Proteins
134027651 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Wzz
Motif
Other DBs
NCBI-GeneID:
134027651
NCBI-ProteinID:
XP_062326579
LinkDB
All DBs
Position
10:7608634..7618564
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AA seq
766 aa
AA seq
DB search
MMRQQAARGMSAPGLSMALLALLSFFIASMAELRGGKPAGPVLQRHKREWLWNSLYVEEE
RPAPVPYKIGQLRSTKVNERTHYEIVGEGVVGHNPPIFMVNENGDLFVTSQLDREQKSKY
LLRAKLLDDRSNLVEREEDFVVLVTDINDNDPVFPPSFNASIRERSHKGTKVITASATDA
DDPTTANAALRYTLLQGGDVFDIDSSTGLITTKFEPLDREHRSLYVLVVQAQDTWGKKQG
GTATTSVSITLTDINDNMASFTRKSYEFKVPENQKLDVKLGTLELEDRDELHNKDPIFTI
AAPLNIKFDLERSPKKDGNLMLKQPLDYETQSSYTFSVDVRETNLQEPADNKNLAVTKAQ
VVIQVLDVDEPPLFTRDIYTFSVKEETMVTNIGVVKARDPDRVNKTIRYSIEEIDCPVGI
NPITGQLSTQRKLDRELKATYMIQVKAQEEPQGLASFVKVNLLVIDINDNEPELSAEDVF
VCENDMKNTVIGTIRATDKDEQTATFSFSLMEPSSNFSVIDNKDNTANILLKHGSFSVDD
PRDYILEIGINDGGRPAKSSVTSLPIRVCRCDRNRIHTQCKAAHLKMGVSTPALIAILLC
ILTILVIVILFVLRKRYQKEALVSMGKNAEIHEQLVTYDEEGGGEMDTNGYDVSILTSAR
HDGSMMCQGPSLYAMVQRPPACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGPESL
AGSLSSLDNSSTSSNLDYDFLQDWGPRFRPLAELYGVDGPDTYSPY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcagcaagctgcccgtgggatgagcgcaccagggctgagcatggctctcctg
gccctgctctccttcttcatcgccagcatggctgagctgaggggcggcaagccagcaggc
cccgttctgcaacgccacaagagagagtggctgtggaactcgctctacgtggaggaggag
cggccggctcctgtgccgtacaagataggacagttgaggtccaccaaggtgaatgagagg
acacactatgagatagtaggggagggggtggtgggtcataacccacccatcttcatggtg
aatgagaatggggacctgttcgttaccagccagctggaccgcgaacagaagagcaagtac
ctccttcgggccaagctgcttgatgaccgcagcaacctggtggagcgagaagaggacttt
gtggtcttggtcacagacattaacgacaacgatcctgtcttcccgccatcgttcaatgca
tccatcagagagaggtcacataaaggaactaaagtcataacagccagtgccactgatgca
gatgacccaacaacggccaacgcagcgctgcgttacaccttgctccaaggaggggacgtc
tttgacatcgacagctccacaggtctgataacgaccaagttcgagcccctggaccgtgag
catcgcagcctgtacgtcctggttgtccaggctcaggacacgtgggggaaaaagcagggg
ggcacggcgaccacgtctgtctctatcaccctgaccgacatcaatgacaacatggcatcc
tttaccagaaaatcgtacgagtttaaagttcctgagaaccagaagctggatgtgaagctc
ggcaccctggagctggaggacagagatgagctgcataacaaagaccccatcttcaccatt
gccgctccgctcaatatcaagtttgacttggagcgcagtccaaagaaagatggcaacctc
atgctgaaacagccactggactacgagacccagagcagctacacgttctctgtggatgtg
cgagagaccaacctccaggaaccagcagacaacaagaacttggcggtgaccaaagcacag
gtcgtcatccaggttctggatgtggacgagccccccctcttcactagagacatctacacc
ttctccgtgaaggaggagaccatggtcactaacataggagtggtcaaagccagagaccct
gaccgtgttaacaaaaccataaggtactccatcgaggaaatagactgtccagtgggaatc
aaccccatcacaggacagctgtctacacaaaggaagctggaccgtgagctaaaggctacc
tacatgattcaggtcaaagcccaggaggagccccaaggactggcctcttttgtgaaggtg
aacttgctcgtgatagacatcaatgacaacgagcccgagctttctgccgaagatgtgttc
gtttgtgagaacgacatgaagaacacggttattgggacaattcgagccacagacaaggat
gaacaaacagccacattcagcttctcactgatggagcccagctccaacttttcagtaatt
gacaacaaggataacactgccaacatcctgctaaaacacggcagcttcagtgtggacgac
cccagggattacatccttgagattgggattaatgatggagggagaccggcaaagagcagt
gtcacttctctgccaataagagtgtgtcgctgtgacaggaacaggatccacacccagtgt
aaagctgcccatctcaagatgggcgtcagcacgccagctctaatcgccatccttctctgc
attctcaccatcctcgtcatagtgatcctgtttgtcctgaggaagcgctaccagaaggag
gcattggtgagcatggggaagaatgcagagatccacgagcagctagtgacctacgacgag
gagggcggcggggagatggacaccaacggctatgacgtgtcaatcttgacctcggcccgc
catgacggcagcatgatgtgccagggcccctccctctacgccatggtccagcggcccccc
gcttgcaagggcgacatggcggtgatgattgaggtgaagaaggacgaggcggaccatgac
cgggatggcatcccctatgacacgctgcacatctacggctatgaaggcccagagtccctg
gccgggagcctcagctcactggacaactcctccaccagctccaacctggactatgatttc
ctccaggactggggtccacgcttcagacccctggccgagctgtatggggtggatgggcca
gacacatacagcccctattga
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