Osmerus eperlanus (European smelt): 134028639
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Entry
134028639 CDS
T10927
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134028639 (trpc4b)
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134028639 (trpc4b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
Egg_lysin
YVC1_C
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
134028639
NCBI-ProteinID:
XP_062328269
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Position
11:12539164..12546025
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AA seq
917 aa
AA seq
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MRHGQAAISQLYNRTDTSLHRDRIHLKIVRAKSELSGLERAYLRAIEKGDYASVKQALEE
AEIYFRININCVDPLGRTALLIAIENENLEIIELLLNYNVFVGDALMHAIRKEVVGAVDV
ILNHKKPSREKQVPPILLENQFSDFTPDITPIILAAQTNNYEIIKLLLQKGVSIPHPHAV
CCNCIECLSSSDVDSLRHSRLRLNIYKALASPSLIALSSEDPFLTAFQLSWELKQLSEVE
NEFKSEYEALSHQCKQFAKDLLDQTRSSKELETILNYRDDINPLLVENTNDLARLKLAIK
YRQKEFVAQPNCQQLLASHWYGDFPGWRRRHWAGKFIICFIIGCLFPVFSLCYLIYPKSS
YGLFIRKPFIKFICHTASYLTFLFLLLLASQHIVSTHPNRQGPLPTTVEWMILPWVLGFI
WTEIKQMWAEGFQDYLHDWWNLMDFVMNSLYLATISLKTIAYVKYSGFKPRESWEMWHPT
LVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGL
NQLYFHYETDEGKDCKGIRCELQNNAFSTMFETLQSLFWSIFGLISIYVTNVKADHKFTD
FVGATMFGTYSVISMVVLLNMLIAMMNNSYQHIADHADIEWKFARAKLWMSYFEEGGTLP
PPFNIIASPKSIWSFITWLKEHIIKRTQAVKTERFGKMGRRAAENVRINHQYQEVLKHLV
KRYVAAMIRDAKTKEGLTEENFKELKQDISSFRYEVLGMMKGNISDGRLGQESNIRCSTP
DNQFTPSPTFPTAKPQGKIHLFNVTSTILQSATETSTSQASTKLANNPVFPKLVPLATEV
RLVCSDYPNDMSDLGQKNKCPDPSSQVFPVSDEPGESDEDQRGCNGGCGVRGRARMSEEQ
EKEVENQKKEIRPWKPI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatggccaagcagccatttcacagctgtataacagaacagatacttcattgcat
agggaccgcatccacctgaagattgtccgggctaaatcagaactgtctggcctggagcga
gcctatctgcgtgctatcgagaagggagactacgctagtgtcaaacaggccctagaggag
gcagagatctatttcaggatcaacatcaactgtgttgacccactgggacgcacagcacta
ctcatagccattgagaatgagaacctggagatcattgagcttcttcttaactacaatgtg
tttgtgggagatgcactgatgcatgctatccggaaggaggtggtgggagctgtggatgtg
atcctcaaccacaagaagcctagcagggagaagcaggtgccaccaatcctgttggaaaat
cagttttctgacttcaccccagacatcacccccattatcctggctgcacaaaccaacaac
tatgagattatcaagttgctgttgcaaaagggtgtatccatacctcacccacatgcagtg
tgttgcaactgcattgagtgtttgtccagctcagatgtggacagcctgcgtcactctcgc
ttgcgcctcaacatttacaaggccctggctagcccttccctcatagccctctccagcgag
gaccccttcctgactgccttccagctcagttgggagctgaaacagctcagcgaggtggag
aatgagttcaagtcagagtacgaggcgctctcccaccagtgtaagcagtttgccaaggat
ttgctggaccagactaggagttccaaagagctggaaacgatcctcaactaccgggatgac
atcaaccctctgttggtcgagaacaccaatgacttggcccgtctgaagttggccatcaag
taccgtcagaaggagtttgttgctcaaccaaactgtcagcagctgttggcttctcactgg
tatggcgatttcccaggctggagaagacgccactgggcagggaagttcatcatctgtttc
atcattggctgtctcttcccagtcttctccctctgctacctaatctatcctaagagcagt
tatggcctcttcatacgcaagcccttcatcaagtttatctgccacacagcctcctacctc
accttccttttcctcctcctgctggcctcccagcacattgtgtctacacaccctaaccgt
caggggccgctgcccacaaccgtggagtggatgatcctgccctgggtcttaggcttcata
tggacagagatcaagcagatgtgggctgagggcttccaggactacctccatgactggtgg
aacctgatggactttgtcatgaattctttgtatcttgccaccatttctctaaagactatt
gcttatgtgaagtacagtggcttcaaacccagagagagttgggagatgtggcatcctacc
ttggtggcagaggccttgtttgccatagctaacatcttcagctccctgcggctcatctcc
ctcttcactgcaaactcccacctgggacccctgcagatctcccttggccgcatgctgttg
gacatcctcaagttcctttttatctactgcctggtattgctggccttcgcaaatgggctc
aaccagctctacttccactatgagacagacgaaggaaaggattgcaagggaattcgatgt
gaactccaaaacaacgctttttcaacgatgtttgagaccctgcagtctttgttctggtcc
atattcgggctcatcagtatctatgtgaccaatgtgaaagcggaccacaagttcactgac
tttgtgggcgccaccatgtttggcacctatagtgtcatatccatggtggttctgctcaac
atgctcatcgctatgatgaacaactcctaccagcatatcgctgatcatgctgacattgag
tggaaatttgcaagagcaaagttgtggatgagctattttgaagagggagggactttgccg
cccccttttaacatcattgccagtccaaagtccatctggtccttcatcacatggttaaag
gaacacataatcaaaaggacacaagccgtaaaaacagagagatttggaaagatggggaga
cgggctgctgaaaatgtgcgaattaaccaccagtatcaggaggtgctgaaacatttggta
aagagatatgttgctgcaatgatcagagatgccaaaacaaaggaagggcttacagaagag
aatttcaaggagctgaagcaagacatttccagcttccgatatgaagtccttgggatgatg
aagggaaacatttcagatggtcgattaggtcaagaaagtaacatcagatgttctacacca
gacaatcaattcacaccctcccccacatttcccactgccaaacctcagggcaaaatccac
ctctttaacgtcacttccacaatcctgcagagtgccactgaaacctccacctcccaagcc
tctaccaaactagccaacaacccagtattccctaagcttgttcccctagctacagaagtc
aggctggtctgcagtgactatcccaatgatatgtcagacttggggcaaaagaacaagtgt
ccagaccccagcagtcaggtgtttcctgtgtcagatgagcctggggagtctgatgaagac
cagcggggctgcaatgggggatgcggggtgagaggcagagccaggatgtcagaggagcaa
gagaaggaggttgagaatcagaaaaaagaaatccgtccatggaagccaatatag
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