Osmerus eperlanus (European smelt): 134032898
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Entry
134032898 CDS
T10927
Symbol
rapgef2b
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04517
IgSF CAM signaling
oep04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134032898 (rapgef2b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134032898 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134032898 (rapgef2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
RA_2
PDZ_2
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
134032898
NCBI-ProteinID:
XP_062332936
LinkDB
All DBs
Position
13:complement(16027963..16048150)
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AA seq
1344 aa
AA seq
DB search
MPKQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSV
EVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKN
MQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLT
YRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTHFLEEFENNL
EREKMCGHLRLLNIACAAKAKPRLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSK
AAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEQDQ
EAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNK
LKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQS
HHRILDFTNQPDMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSL
CEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQIS
LLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVA
SEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSK
YEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLV
NFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGH
KKRVRRSSFLNAKKLYEDAQMARKVKQYLSHLNLETNEESLHTLSIQCEPSVNTLPKSSG
DRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLK
KILSLSEEASERQKRQPDDAASNSSSQLSSPPTSPHSSPKKGYPRMADSYSDSGHSEISS
RSSLVSNSSFDMAQEERRLRALGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAG
CPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGG
GGRVPGGAAPRGARXALLGGQAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRR
GGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTAL
TVSDFPEAQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDPHLHAQQGGSRQRAPGVP
RARSAGEDHEPEEEEEEDEQVSAV
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcaactcctggagttcatgcaccagctgccagcgttcgccaacatgaccatg
tctgtccggagggagctgtgtgccgtcatggtgttcgctgtggtggagcgggcaggaacc
atcgtcctcaacgatggagaagagctggactcgtggtcggtgatcctgaacggctccgtg
gaggtgacgtgccctgagggccgcgctgagatcctgtgcatggggaacagcttcggggtg
tcgcccaccatggagaaggagtacatgaagggcgtgatgaagaccaaggtggacgactgc
cagtttgtgtgcatcgcccagcaggactactgctgcatcctgaaccaggtggagaagaac
atgcagaaggtggaggaggagggagagatcgtcatggtgaaggagcaccgcgaactggac
cgcaccggaaccaggaagggacacatcgtcatcaagggcacgacggagcgcctgaccatg
cacctggtggaggagcactcggtggtggaccccacctacatcgaggacttcctgctcacc
tacaggaccttcctgtccagccccatggtggtggggcacaagctgctggagtggttccat
gatccaagcctcagggacaaggttacacgggtagtcttgctgtgggtgaacaatcacttc
aacgactttgaaggcgaccatgcgatgacacacttccttgaggagttcgagaacaatctg
gagagagagaaaatgtgcgggcacctgagactgttaaacatagcgtgtgctgccaaggcc
aagccccggctggtcaccctgaccaagccgtctagggaggccccactggccttctccctg
ctgggcggctctgagaagggcttccgcgtcttcatcgacagcgtggagccgggaagcaag
gctgcagaggcggggctcaaaagaggagatcagatcttggaggtgaacgggcagaacttt
gagaacgtccagctcaccaaagccaacgagatcctgaggaacaacacacacctgtccatt
actgtgaaaaccaacctgttagtgttcaaggagctcctcagcaggccggagcaggaccag
gaggccgagggcgaggaggaggacaggaagaacggagcgcctcacctccccaagatcgga
gacatcaagaaggccagccgcttctccatcccagacctggcggtagacgtggagcaggtg
atgggtctggagaaggtctccaagaaggccaaggccaacacggtgggaggacgcaacaag
ctgaagaagatcttcgacaagactctcaccagcatcctgcccccgaaaccatacaacgac
gtcggcgtgggccaatcccaggacgacagcatcgtggggctgaagcagtcgaagcaggtc
cccccggcgctgccagtcagcggcaacctgtcgtcctccaacccagacctgctccagtct
caccaccgcatcctggacttcaccaaccagccagacatgtcggaccaggtcctgcgtgtg
ttcaaggctgaccagcagagtcgctacatcatgatcggtaaagacaccacggccaaggag
gtggtggtgcaggccatccgcgagtttgccctgacggccgcaccggaagcctattcgctg
tgcgaggtgtccgtcacgccggagggcgtcatcaagcagagacgcctgccggagcagctc
tccaagctggcagacaggatccagctcagcggcaggtactacctgaagagcaacatggag
acggagaccctgtgctctgacgaggacgcgcaggacctgctgagggagggtcagatctcc
ctgctgcagctcagcacggtggaggtggccacccagctgtccatgagggccttcgagctc
ttctgcgccatcgagcccaccgagtacatggacgacctgttcaagctgcgctccaagacg
ggctcggccagcctgaagcgcttcgaggaggccatcaacctggagacgttctgggtggcg
tcggaggtgacgcgggaacccaaccagctcaagcgcatgaagaccatcaagcactttgtg
aagatcgccctgcactgccgcgagtgcaagaacttcaactccatgttcgccatcatcagc
ggtctgaacctggctccagtctccagactgcggggcacgtgggagaaactgcccagtaag
tacgagaagctgtttggggacctccaggacctgttcgacccctccaggaacatggccaag
taccgcaacgtcctcaacaaccagaacctccagcctcccatcatccctctcttccccgtc
atcaagaaggacctcaccttcctgcacgaaggtaatgactcgaaggtggacgggttggtg
aactttgagaagctgaggatgatcgccaaggagatccgtcacgtgggccgtatgggctcc
gtcaacatggatcctgctctcatgttcagaaccaggaagaagaaatggaggagtttaggg
tccctcagtcagggcagtgccaacgcggcggtgctggacgtcacccagacaggcggacac
aagaagcgcgtgcgacgcagctccttcctcaacgccaagaagctgtacgaggacgcgcag
atggcccgcaaggtcaagcagtacctgtcccacctgaacctggagaccaacgaggagagc
ctgcacaccctgtccatacagtgtgagccctccgtcaacaccttgcccaagagttccggg
gacaggaagaggccggacacgtctccggtagtgtccagggcggcgtcccagcagcggggt
cagctgaccaagagcggccaggccctccaggtaccggccgtggccctctacccctcccgc
aagaaggtccccgtcaaagacctgccgcccttcggcacaagctcgcctcagtcgctgaag
aagatcctgtctctgtcggaggaggcgagcgagaggcagaagagacagccagacgacgca
gcgtccaactcctcctcccagctctcctccccccccacctccccccacagctcccctaag
aagggttaccccaggatggctgactcctactcagactcgggtcacagtgagatctcgtcc
cgctccagcctggtcagtaactcgtcgttcgacatggcccaggaggagaggaggctgcgg
gccctgggagaggcccacgccgggggccccaggctggagagacgagccaccaccgacccc
gaccagtacagcctcggctcctactcgtcggtgcatgagtgtcgaggcctgtacgctggc
tgccccacggtgatgtcatcgcccagctcggaggagctgacccaggaccagggcgaccgc
gtgtccctggacgccgcggacagtggccgaggctcctggacctcctgctcctccggttcc
cacgacaacatccagaccatgcagcagggccgcagctgggagacactggccttcggcggg
ggggggcgggtgcctgggggggctgccccacggggggcccgannggccctgctggggggg
caggcggggctgtgggcggcgcaggctcggggcagctgggcgtcggccagctcgtcgtcg
tcatcggcagcgtactggggggaggactccgagggggacacgggcaccatcaagaggcgg
gggggcaaggacgttaacgcagacggagagaccagcagcatcacctccacgggctcggag
gacgccaagcaggggagaccctcgccctcccccatcaccacaggggggaagggactgctc
tcacggaaggagagccgttacagggacccgccccccacccctcccggctacaccgcgctg
accgtgtccgacttccccgaggcgcagcagccctcgccctccgccccgccctcccagccc
gcccgccgcccccccgactacaccacggccctccagcgctcgcgcatggtcacccagtct
cccgacccccacctccatgcccagcaggggggctccaggcagcgggcccccggcgtcccc
cgcgcccgctcggccggcgaggaccacgagcccgaggaggaagaggaggaggacgagcag
gtgtctgcagtctga
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